GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002987-TA|BGIBMGA002987-PA|IPR009445|Protein of unknown
function DUF1077
         (172 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   1.6  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    22   2.8  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    22   2.8  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    22   2.8  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    22   2.8  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    22   2.8  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    22   2.8  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   3.7  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    21   6.5  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    21   6.5  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    21   6.5  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    21   6.5  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    21   6.5  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    21   6.5  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    21   6.5  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    21   6.5  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    21   6.5  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    21   6.5  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    21   6.5  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    21   8.6  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    21   8.6  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    21   8.6  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   8.6  
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    21   8.6  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    21   8.6  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/25 (40%), Positives = 17/25 (68%)

Query: 31  PGYSQSSNANYAESSKDSDSNLLLI 55
           P ++Q   A YA++SKD   ++L+I
Sbjct: 300 PFHAQRLLAVYAQNSKDKPEDVLII 324


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)

Query: 145 LPTHSSDWLAFEEPQTRLEHIG 166
           LP     W++ +E   R  HIG
Sbjct: 127 LPRPMGPWISIQEQIPRFRHIG 148


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)

Query: 145 LPTHSSDWLAFEEPQTRLEHIG 166
           LP     W++ +E   R  HIG
Sbjct: 130 LPRPMGPWISIQEQIPRFRHIG 151


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)

Query: 145 LPTHSSDWLAFEEPQTRLEHIG 166
           LP     W++ +E   R  HIG
Sbjct: 130 LPRPMGPWISIQEQIPRFRHIG 151


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)

Query: 145 LPTHSSDWLAFEEPQTRLEHIG 166
           LP     W++ +E   R  HIG
Sbjct: 130 LPRPMGPWISIQEQIPRFRHIG 151


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)

Query: 145 LPTHSSDWLAFEEPQTRLEHIG 166
           LP     W++ +E   R  HIG
Sbjct: 130 LPRPMGPWISIQEQIPRFRHIG 151


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 120 QKIVYCIGNIVNILLALYKCQSMGLLPTHSSD-WLAFEEPQTRLEHIG 166
           +K+ Y I  I  I + +      G  P  S + W++ +E   R  HIG
Sbjct: 349 KKLYYNINYIEQIPVPVPVPIYCGNFPPRSMEPWISMQEQIPRFRHIG 396


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 17  NQKNKQLSTELPSPPGYSQSSNANYAESSKDSDSNLLLIKKLW 59
           N+ +          P  S SSN + AES   S  N L   K++
Sbjct: 259 NEDSSDSGAAASDRPPASASSNEHEAESEHTSTPNFLSEAKIF 301


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/21 (33%), Positives = 10/21 (47%)

Query: 146 PTHSSDWLAFEEPQTRLEHIG 166
           P     W++ +E   R  HIG
Sbjct: 125 PRPMGSWISIQEQIPRFRHIG 145


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/21 (33%), Positives = 10/21 (47%)

Query: 146 PTHSSDWLAFEEPQTRLEHIG 166
           P     W++ +E   R  HIG
Sbjct: 125 PRPMGSWISIQEQIPRFRHIG 145


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/21 (33%), Positives = 10/21 (47%)

Query: 146 PTHSSDWLAFEEPQTRLEHIG 166
           P     W++ +E   R  HIG
Sbjct: 125 PRPMGSWISIQEQIPRFRHIG 145


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/21 (33%), Positives = 10/21 (47%)

Query: 146 PTHSSDWLAFEEPQTRLEHIG 166
           P     W++ +E   R  HIG
Sbjct: 125 PRPMGSWISIQEQIPRFRHIG 145


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/21 (33%), Positives = 10/21 (47%)

Query: 146 PTHSSDWLAFEEPQTRLEHIG 166
           P     W++ +E   R  HIG
Sbjct: 125 PRPMGSWISIQEQIPRFRHIG 145


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/21 (33%), Positives = 10/21 (47%)

Query: 146 PTHSSDWLAFEEPQTRLEHIG 166
           P     W++ +E   R  HIG
Sbjct: 125 PRPMGSWISIQEQIPRFRHIG 145


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/21 (33%), Positives = 10/21 (47%)

Query: 146 PTHSSDWLAFEEPQTRLEHIG 166
           P     W++ +E   R  HIG
Sbjct: 128 PRSMGPWISIQEQIPRFRHIG 148


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/21 (33%), Positives = 10/21 (47%)

Query: 146 PTHSSDWLAFEEPQTRLEHIG 166
           P     W++ +E   R  HIG
Sbjct: 128 PRSMGPWISIQEQIPRFRHIG 148


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/21 (33%), Positives = 10/21 (47%)

Query: 146 PTHSSDWLAFEEPQTRLEHIG 166
           P     W++ +E   R  HIG
Sbjct: 128 PRSMGPWISIQEQIPRFRHIG 148


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/25 (32%), Positives = 11/25 (44%)

Query: 146 PTHSSDWLAFEEPQTRLEHIGGGLS 170
           P     W++ +E   R  HIG   S
Sbjct: 359 PRPMGPWISIQEQIPRFRHIGPSTS 383


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/21 (33%), Positives = 10/21 (47%)

Query: 146 PTHSSDWLAFEEPQTRLEHIG 166
           P     W++ +E   R  HIG
Sbjct: 361 PRSMGPWISIQEQIPRFRHIG 381


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/21 (33%), Positives = 10/21 (47%)

Query: 146 PTHSSDWLAFEEPQTRLEHIG 166
           P     W++ +E   R  HIG
Sbjct: 133 PRPMGPWISIQEQIPRFRHIG 153


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/21 (33%), Positives = 10/21 (47%)

Query: 146 PTHSSDWLAFEEPQTRLEHIG 166
           P     W++ +E   R  HIG
Sbjct: 134 PRPMGPWISIQEQIPRFRHIG 154


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/21 (33%), Positives = 10/21 (47%)

Query: 146 PTHSSDWLAFEEPQTRLEHIG 166
           P     W++ +E   R  HIG
Sbjct: 129 PRPMGPWISIQEQIPRFRHIG 149


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/25 (24%), Positives = 15/25 (60%)

Query: 70  PMNLFIMYMAGNSISIFPIMMVGML 94
           P N+ + Y    ++S+F +++  +L
Sbjct: 312 PPNILLYYRDSLALSVFALILTALL 336


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/21 (33%), Positives = 10/21 (47%)

Query: 146 PTHSSDWLAFEEPQTRLEHIG 166
           P     W++ +E   R  HIG
Sbjct: 357 PRPMGPWISIQEQIPRFRHIG 377


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/21 (33%), Positives = 10/21 (47%)

Query: 146 PTHSSDWLAFEEPQTRLEHIG 166
           P     W++ +E   R  HIG
Sbjct: 370 PRPMGPWISIQEQIPRFRHIG 390


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.133    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,958
Number of Sequences: 429
Number of extensions: 1874
Number of successful extensions: 25
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of query: 172
length of database: 140,377
effective HSP length: 54
effective length of query: 118
effective length of database: 117,211
effective search space: 13830898
effective search space used: 13830898
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 41 (20.6 bits)