GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002985-TA|BGIBMGA002985-PA|IPR013830|Esterase, SGNH
hydrolase-type
         (225 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               25   0.58 
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   7.1  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 142 NGLRDKNSKINRLLHEKVSNINKVEMVLIDKGFVQSDGTISH 183
           N + DK SK+N  L E   N+N + + + ++  +Q+D    H
Sbjct: 303 NVVTDKKSKVNFALPELQHNLN-ILVDMCEQDIIQNDRRTRH 343


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/20 (35%), Positives = 13/20 (65%)

Query: 69  HKDQTQNVLWRIKNGELDHV 88
           H DQT   +W+   G++D++
Sbjct: 191 HYDQTAIEIWKQCEGKIDYL 210


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.135    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,991
Number of Sequences: 429
Number of extensions: 2872
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 225
length of database: 140,377
effective HSP length: 55
effective length of query: 170
effective length of database: 116,782
effective search space: 19852940
effective search space used: 19852940
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 42 (21.0 bits)