GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002976-TA|BGIBMGA002976-PA|IPR002347|Glucose/ribitol
dehydrogenase
         (367 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    38   1e-04
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   5.5  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   5.5  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   5.5  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   7.3  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   9.6  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 38.3 bits (85), Expect = 1e-04
 Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 7/150 (4%)

Query: 53  DKTCLITGANSGVGLEMTKCLNLCGCTVLMACRNTYAASVVAKNTCLKPDSLRLYELNLA 112
           D+  L+TGANSG+G  + +CL   G  V+           + +    KP  L   + +L+
Sbjct: 7   DEVALVTGANSGIGKCLIECLVGKGMKVIGIAPQVDKMKTLVEELKSKPGKLVPLQCDLS 66

Query: 113 SLRSVRKCSDDLLNKEKKIDIVILNAGI---FGLPWTETVDKLEITFQVNYLSQYYLLMN 169
           +   + K  + +      IDI+I NA I     L   E +D  +I F +N L    ++  
Sbjct: 67  NQNDILKVIEWVEKNLGAIDILINNATINIDVTLQNDEVLDWKKI-FDINLLGLTCMIQE 125

Query: 170 IEDILAD---NARVVIISSESHRYVTLPFN 196
           +  ++     N  +++  +++     LP N
Sbjct: 126 VLKLMKKKGINNGIIVNINDASGLNLLPMN 155


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query: 285 PLYCATSSDLNGLSAIYYKNC 305
           P Y A  ++L  LS+++ K C
Sbjct: 176 PEYSARENELRALSSLFSKGC 196


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query: 285 PLYCATSSDLNGLSAIYYKNC 305
           P Y A  ++L  LS+++ K C
Sbjct: 176 PEYSARENELRALSSLFSKGC 196


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query: 285 PLYCATSSDLNGLSAIYYKNC 305
           P Y A  ++L  LS+++ K C
Sbjct: 176 PEYSARENELRALSSLFSKGC 196


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%)

Query: 47  KGLDLKDKTCLI--TGANSGVGLEMTKCLNLCGCTVLM 82
           KGL LK    +I  T  N+G+GL M   +    C ++M
Sbjct: 92  KGL-LKPGCTIIEPTSGNTGIGLAMAAAVRGYKCIIVM 128


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 3/43 (6%)

Query: 8   NLILNDKVRAFSSSKVKSLVE---NYFDLNFRIHGPTGEEVTK 47
           N  + D+     S++++ +V    N+ D+NFRI G   +E+ +
Sbjct: 368 NKPVKDEYMLVLSNRMQKIVNDDFNFDDVNFRILGANVKELIR 410


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.133    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,180
Number of Sequences: 429
Number of extensions: 4601
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 6
length of query: 367
length of database: 140,377
effective HSP length: 59
effective length of query: 308
effective length of database: 115,066
effective search space: 35440328
effective search space used: 35440328
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)