GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002973-TA|BGIBMGA002973-PA|IPR007537|tRNAHis
guanylyltransferase
         (279 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   1.3  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   4.0  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           22   5.3  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           22   5.3  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    22   7.0  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    22   7.0  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    22   7.0  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    22   7.0  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    21   9.2  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)

Query: 243 NIYILSVKKSKQNLMYIGPTTEI--IEDQLSKYE 274
           N+ I SVK S+ ++ +  P TEI    D + +YE
Sbjct: 424 NVRITSVKSSELSISWDAPITEIGGDSDLVERYE 457


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 216 SILHNKVNKSIIVDVHDDMLKDKFWKENIYILSVKKSKQNLMYIGP 261
           ++LH+ +NK II   +D + KD +   +I +L  +K  +    +GP
Sbjct: 231 TVLHS-INKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGP 275


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 13 EHDDSLLPNTWIVIRLD 29
          E    L+ NTW V+R D
Sbjct: 26 ERQKKLVQNTWAVVRKD 42


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 13 EHDDSLLPNTWIVIRLD 29
          E    L+ NTW V+R D
Sbjct: 26 ERQKKLVQNTWAVVRKD 42


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/32 (31%), Positives = 20/32 (62%)

Query: 75  SDEYSFVLRKDSCLYKRRSAKLLTTINSKFSS 106
           SD+YS ++R      + ++  +LTT++S+  S
Sbjct: 102 SDDYSTLIRVRVIDVRPQNETILTTVSSEADS 133


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/32 (31%), Positives = 20/32 (62%)

Query: 75  SDEYSFVLRKDSCLYKRRSAKLLTTINSKFSS 106
           SD+YS ++R      + ++  +LTT++S+  S
Sbjct: 150 SDDYSTLIRVRVIDVRPQNETILTTVSSEADS 181


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/32 (31%), Positives = 20/32 (62%)

Query: 75  SDEYSFVLRKDSCLYKRRSAKLLTTINSKFSS 106
           SD+YS ++R      + ++  +LTT++S+  S
Sbjct: 150 SDDYSTLIRVRVIDVRPQNETILTTVSSEADS 181


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/32 (31%), Positives = 20/32 (62%)

Query: 75  SDEYSFVLRKDSCLYKRRSAKLLTTINSKFSS 106
           SD+YS ++R      + ++  +LTT++S+  S
Sbjct: 150 SDDYSTLIRVRVIDVRPQNETILTTVSSEADS 181


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/19 (47%), Positives = 11/19 (57%), Gaps = 1/19 (5%)

Query: 117 EHLPLKYPPCFD-GRIVLY 134
           EH P K+PP F   R+  Y
Sbjct: 401 EHDPAKFPPSFRISRVAAY 419


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.137    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,465
Number of Sequences: 429
Number of extensions: 4006
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 9
length of query: 279
length of database: 140,377
effective HSP length: 57
effective length of query: 222
effective length of database: 115,924
effective search space: 25735128
effective search space used: 25735128
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)