Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002964-TA|BGIBMGA002964-PA|IPR008946|Nuclear receptor,
ligand-binding, IPR001628|Nuclear hormone receptor, DNA-binding,
IPR003070|Orphan nuclear receptor, IPR001723|Steroid hormone receptor,
IPR000536|Nuclear hormone receptor, ligand-binding
(567 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D49728-1|BAA08565.1| 598|Homo sapiens DNA binding protein protein. 391 e-108
BT007144-1|AAP35808.1| 598|Homo sapiens nuclear receptor subfam... 391 e-108
BC016147-1|AAH16147.1| 598|Homo sapiens nuclear receptor subfam... 391 e-108
CR456704-1|CAG32985.1| 598|Homo sapiens NR4A1 protein. 390 e-108
AK223625-1|BAD97345.1| 598|Homo sapiens nuclear receptor subfam... 390 e-108
L13740-1|AAA36763.1| 598|Homo sapiens TR3 orphan receptor protein. 389 e-107
X75918-1|CAA53518.1| 598|Homo sapiens NOT protein. 388 e-107
BC066890-1|AAH66890.1| 535|Homo sapiens nuclear receptor subfam... 388 e-107
BC009288-1|AAH09288.1| 598|Homo sapiens nuclear receptor subfam... 388 e-107
AC074099-1|AAY24203.1| 598|Homo sapiens unknown protein. 388 e-107
AB019433-1|BAA77328.1| 598|Homo sapiens T-cell nuclear receptor... 388 e-107
AB017586-1|BAA75666.1| 598|Homo sapiens Nurr1 protein. 388 e-107
AK131566-1|BAD18699.1| 652|Homo sapiens protein ( Homo sapiens ... 385 e-106
S77154-1|AAB33999.1| 535|Homo sapiens TINUR protein. 383 e-105
U12767-1|AAB02581.1| 587|Homo sapiens mitogen induced nuclear o... 351 5e-96
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 351 5e-96
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 351 5e-96
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 351 5e-96
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 351 5e-96
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 351 5e-96
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 347 6e-95
M57707-1|AAA63254.1| 454|Homo sapiens retinoic acid receptor-ga... 168 4e-41
M38258-1|AAA60254.1| 454|Homo sapiens retinoic acid receptor-ga... 168 4e-41
M24857-1|AAA52692.1| 454|Homo sapiens RARG protein. 168 4e-41
BC093729-1|AAH93729.1| 454|Homo sapiens retinoic acid receptor,... 168 4e-41
BC093727-1|AAH93727.1| 454|Homo sapiens retinoic acid receptor,... 168 4e-41
X06614-1|CAA29829.1| 462|Homo sapiens protein ( Human mRNA for ... 167 1e-40
X06538-1|CAA29787.1| 432|Homo sapiens protein ( Human mRNA for ... 167 1e-40
CR457438-1|CAG33719.1| 462|Homo sapiens RARA protein. 167 1e-40
BC071733-1|AAH71733.1| 457|Homo sapiens retinoic acid receptor,... 167 1e-40
BC008727-1|AAH08727.1| 462|Homo sapiens retinoic acid receptor,... 167 1e-40
X07282-1|CAA30262.1| 448|Homo sapiens protein ( Human mRNA for ... 166 2e-40
AF088895-1|AAD05222.1| 462|Homo sapiens retinoic acid receptor ... 166 2e-40
U41743-1|AAB00113.1| 520|Homo sapiens nucleophosmin-retinoic ac... 166 2e-40
U41742-1|AAB00112.1| 563|Homo sapiens nucleophosmin-retinoic ac... 166 2e-40
S50916-1|AAB19602.2| 416|Homo sapiens retinoic acid receptor al... 166 2e-40
M73779-1|AAA60126.1| 797|Homo sapiens PML-RAR protein protein. 166 2e-40
Y00291-1|CAA68398.1| 448|Homo sapiens protein ( Human hap mRNA ... 165 3e-40
BC060794-1|AAH60794.1| 448|Homo sapiens retinoic acid receptor,... 165 4e-40
AJ250835-1|CAB60726.1| 381|Homo sapiens retinoic acid receptor ... 165 5e-40
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 151 6e-36
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 151 6e-36
BC050415-1|AAH50415.2| 346|Homo sapiens RARB protein protein. 133 1e-30
AY528719-1|AAS00098.1| 435|Homo sapiens estrogen-related recept... 132 4e-30
AY388461-1|AAQ93381.1| 435|Homo sapiens estrogen-related recept... 132 4e-30
AY388460-1|AAQ93380.1| 435|Homo sapiens estrogen-related recept... 132 4e-30
AY388459-1|AAQ93379.1| 435|Homo sapiens estrogen-related recept... 132 4e-30
AY388458-1|AAQ93378.1| 435|Homo sapiens estrogen-related recept... 132 4e-30
AY388457-1|AAQ93377.1| 435|Homo sapiens estrogen-related recept... 132 4e-30
AY388456-1|AAQ93376.1| 458|Homo sapiens estrogen-related recept... 132 4e-30
AL512650-1|CAH71594.1| 435|Homo sapiens estrogen-related recept... 132 4e-30
AL445650-1|CAH70618.1| 435|Homo sapiens estrogen-related recept... 132 4e-30
AF094518-1|AAC99410.1| 458|Homo sapiens nuclear receptor ERRG2 ... 132 4e-30
AB020639-1|BAA74855.2| 469|Homo sapiens KIAA0832 protein protein. 132 4e-30
BC064700-1|AAH64700.1| 442|Homo sapiens ESRRG protein protein. 130 1e-29
AL512650-2|CAH71595.1| 442|Homo sapiens estrogen-related recept... 130 1e-29
AL445650-2|CAH70619.1| 442|Homo sapiens estrogen-related recept... 130 1e-29
L38487-1|AAB17015.1| 481|Homo sapiens estrogen receptor-related... 128 7e-29
X51417-1|CAA35779.1| 433|Homo sapiens protein ( Human mRNA for ... 124 8e-28
AY451390-1|AAS15572.1| 508|Homo sapiens estrogen receptor-relat... 124 8e-28
AY451389-1|AAS15571.1| 433|Homo sapiens estrogen receptor-relat... 124 8e-28
AF058291-1|AAC39899.1| 436|Homo sapiens estrogen-related recept... 124 8e-28
BC131517-1|AAI31518.1| 503|Homo sapiens ESRRB protein protein. 124 1e-27
AF094517-1|AAC99409.1| 500|Homo sapiens nuclear receptor ERRB2 ... 124 1e-27
DQ514553-1|ABF47104.1| 423|Homo sapiens estrogen-related recept... 123 1e-27
BC093722-1|AAH93722.1| 423|Homo sapiens estrogen-related recept... 123 1e-27
BC093720-1|AAH93720.1| 423|Homo sapiens estrogen-related recept... 123 1e-27
BC092470-1|AAH92470.1| 423|Homo sapiens ESRRA protein protein. 123 1e-27
BC063795-1|AAH63795.2| 423|Homo sapiens estrogen-related recept... 123 1e-27
D85242-1|BAA31221.1| 143|Homo sapiens NOR-1 3'-variant protein. 123 2e-27
U38480-1|AAA80681.1| 463|Homo sapiens retinoid X receptor-gamma... 122 3e-27
CR456705-1|CAG32986.1| 463|Homo sapiens RXRG protein. 122 3e-27
BC012063-1|AAH12063.1| 463|Homo sapiens retinoid X receptor, ga... 122 3e-27
AL160058-2|CAC00596.1| 463|Homo sapiens retinoid X receptor, ga... 122 3e-27
AY501390-1|AAS85757.1| 336|Homo sapiens retinoic acid receptor ... 119 2e-26
AF157483-1|AAD45688.1| 336|Homo sapiens retinoic acid receptor ... 119 2e-26
CR536558-1|CAG38795.1| 336|Homo sapiens RARB protein. 118 4e-26
X52773-1|CAA36982.1| 462|Homo sapiens protein ( Human mRNA for ... 118 7e-26
DQ303444-1|ABB96254.1| 452|Homo sapiens retinoid X receptor, al... 118 7e-26
BC110998-1|AAI10999.1| 462|Homo sapiens retinoid X receptor, al... 118 7e-26
BC063827-1|AAH63827.1| 516|Homo sapiens RXRA protein protein. 118 7e-26
AL669970-1|CAM45733.1| 462|Homo sapiens retinoid X receptor, al... 118 7e-26
AL354796-1|CAH70571.1| 462|Homo sapiens retinoid X receptor, al... 118 7e-26
BT019411-1|AAV38218.1| 447|Homo sapiens nuclear receptor subfam... 117 1e-25
X16155-1|CAA34277.1| 418|Homo sapiens COUP-TF protein. 116 2e-25
X12795-1|CAA31283.1| 423|Homo sapiens protein ( Human v-erbA re... 116 2e-25
BC017493-1|AAH17493.1| 423|Homo sapiens nuclear receptor subfam... 116 2e-25
BC004154-1|AAH04154.1| 423|Homo sapiens nuclear receptor subfam... 116 2e-25
X51416-1|CAA35778.1| 521|Homo sapiens protein ( Human mRNA for ... 116 3e-25
U60477-1|AAB09475.1| 414|Homo sapiens apoliprotein AI regulator... 113 2e-24
M64497-1|AAA86429.1| 414|Homo sapiens apolipoprotein AI regulat... 113 2e-24
BC042897-1|AAH42897.1| 414|Homo sapiens nuclear receptor subfam... 113 2e-24
BC014664-1|AAH14664.1| 414|Homo sapiens nuclear receptor subfam... 113 2e-24
X63522-1|CAA45087.1| 533|Homo sapiens retinoic acid X receptor ... 110 1e-23
M84820-1|AAA60293.1| 533|Homo sapiens retinoid X receptor beta ... 110 1e-23
BT007280-1|AAP35944.1| 533|Homo sapiens retinoid X receptor, be... 110 1e-23
BC001167-1|AAH01167.1| 533|Homo sapiens retinoid X receptor, be... 110 1e-23
AL844527-8|CAI41837.1| 533|Homo sapiens retinoid X receptor, be... 110 1e-23
AL662824-20|CAI17614.1| 533|Homo sapiens retinoid X receptor, b... 110 1e-23
AL645940-8|CAI18066.1| 533|Homo sapiens retinoid X receptor, be... 110 1e-23
AL031228-14|CAI95622.1| 482|Homo sapiens retinoid X receptor, b... 110 1e-23
AL031228-13|CAA20239.1| 533|Homo sapiens retinoid X receptor, b... 110 1e-23
AF120161-1|AAD13794.1| 533|Homo sapiens retinoic X receptor bet... 110 1e-23
AF065396-1|AAC18599.1| 533|Homo sapiens retinoic X receptor B p... 110 1e-23
BC041172-1|AAH41172.1| 402|Homo sapiens NR1H3 protein protein. 109 2e-23
BC008218-1|AAH08218.1| 343|Homo sapiens ESRRG protein protein. 108 4e-23
AL844527-9|CAI41836.2| 537|Homo sapiens retinoid X receptor, be... 108 4e-23
AL662824-21|CAI17612.2| 537|Homo sapiens retinoid X receptor, b... 108 4e-23
AL645940-7|CAI18064.2| 537|Homo sapiens retinoid X receptor, be... 108 4e-23
AB209244-1|BAD92481.1| 577|Homo sapiens retinoid X receptor, be... 108 4e-23
X04707-1|CAA28412.1| 456|Homo sapiens put.thyroid hormone recep... 105 6e-22
M26747-1|AAA35677.1| 456|Homo sapiens c-erbA protein. 105 6e-22
BC106930-1|AAI06931.1| 461|Homo sapiens THRB protein protein. 103 2e-21
BC106929-1|AAI06930.1| 461|Homo sapiens thyroid hormone recepto... 103 2e-21
X55005-1|CAA38749.1| 410|Homo sapiens thyriod hormone receptor ... 100 1e-20
M24748-2|AAA66021.1| 410|Homo sapiens thyroid receptor alpha-1 ... 100 1e-20
CR541915-1|CAG46713.1| 410|Homo sapiens THRA protein. 100 1e-20
BC008851-1|AAH08851.1| 410|Homo sapiens THRA protein protein. 100 1e-20
X55074-1|CAA38899.1| 410|Homo sapiens thyroid hormone receptor ... 100 2e-20
AB209346-1|BAD92583.1| 397|Homo sapiens thyroid hormone recepto... 100 2e-20
Z49826-1|CAA89990.2| 408|Homo sapiens hepatocyte nuclear factor... 99 2e-20
AF133504-1|AAF00110.1| 408|Homo sapiens hepatocyte nuclear fact... 99 2e-20
BC105011-1|AAI05012.1| 408|Homo sapiens HNF4G protein protein. 99 5e-20
BC105009-1|AAI05010.1| 408|Homo sapiens HNF4G protein protein. 99 5e-20
M62760-1|AAA21479.1| 351|Homo sapiens ovalbumin upstream promot... 98 8e-20
BC035137-1|AAH35137.1| 451|Homo sapiens THRA protein protein. 97 1e-19
CR542091-1|CAG46888.1| 408|Homo sapiens HNF4G protein. 97 1e-19
U68233-1|AAB08107.1| 472|Homo sapiens farnesol receptor HRR-1 p... 97 2e-19
AF478445-1|AAM53550.1| 482|Homo sapiens farnesoid-X-receptor be... 97 2e-19
M24899-1|AAA35783.1| 490|Homo sapiens triiodothyronine receptor... 96 3e-19
J03239-1|AAA61176.1| 490|Homo sapiens thyroid hormone receptor ... 96 3e-19
BC002728-1|AAH02728.1| 490|Homo sapiens thyroid hormone recepto... 96 3e-19
BC000261-1|AAH00261.1| 490|Homo sapiens thyroid hormone recepto... 96 3e-19
X55074-2|CAB57886.1| 490|Homo sapiens thyroid hormone receptor ... 96 3e-19
Y00479-1|CAA68539.1| 490|Homo sapiens protein ( H.sapiens mRNA ... 95 6e-19
BC071778-1|AAH71778.1| 475|Homo sapiens NR1H4 protein protein. 94 1e-18
BC130573-1|AAI30574.1| 476|Homo sapiens NR1H4 protein protein. 93 2e-18
AF478446-1|AAM53551.1| 486|Homo sapiens farnesoid-X-receptor be... 93 2e-18
AF384555-1|AAK60271.1| 476|Homo sapiens farnesol receptor protein. 93 2e-18
BC069626-1|AAH69626.1| 352|Homo sapiens nuclear receptor subfam... 91 1e-17
AY680697-1|AAT91238.1| 452|Homo sapiens hepatocyte nuclear fact... 91 1e-17
AY680696-1|AAT91237.1| 442|Homo sapiens hepatocyte nuclear fact... 91 1e-17
AL590714-14|CAH72153.1| 352|Homo sapiens nuclear receptor subfa... 91 1e-17
Z49825-1|CAA89989.1| 504|Homo sapiens hepatocyte nuclear factor... 91 1e-17
X99101-1|CAA67555.1| 477|Homo sapiens estrogen receptor beta pr... 91 1e-17
U72969-1|AAB48082.1| 516|Homo sapiens hepatocyte nuclear factor... 91 1e-17
AY785359-1|AAV31779.1| 530|Homo sapiens estrogen receptor 2 (ER... 91 1e-17
AL132772-3|CAI18857.1| 467|Homo sapiens hepatocyte nuclear fact... 91 1e-17
AF215937-2|AAG29940.1| 530|Homo sapiens 5p152 protein. 91 1e-17
AF051427-1|AAC05985.1| 530|Homo sapiens estrogen receptor beta ... 91 1e-17
AB006590-1|BAA24953.1| 530|Homo sapiens estrogen receptor beta ... 91 1e-17
Z30425-1|CAA83016.1| 348|Homo sapiens orphan nuclear hormone re... 90 2e-17
AL590714-13|CAH72154.1| 348|Homo sapiens nuclear receptor subfa... 90 2e-17
AY680698-1|AAT91239.1| 395|Homo sapiens hepatocyte nuclear fact... 90 2e-17
X87871-1|CAA61134.1| 465|Homo sapiens Hepatocyte nuclear factor... 89 3e-17
X87870-1|CAA61133.1| 455|Homo sapiens Hepatocyte nuclear factor... 89 3e-17
X76930-1|CAA54248.1| 465|Homo sapiens hepatocyte nuclear factor... 89 3e-17
DQ022681-1|AAY56401.1| 357|Homo sapiens nuclear receptor subfam... 89 3e-17
AL132772-2|CAC01303.1| 474|Homo sapiens hepatocyte nuclear fact... 89 3e-17
U93553-1|AAD03155.1| 500|Homo sapiens alpha1-fetoprotein transc... 89 4e-17
U80251-1|AAC78727.1| 495|Homo sapiens hepatocytic transcription... 89 4e-17
BC118652-1|AAI18653.1| 495|Homo sapiens nuclear receptor subfam... 89 4e-17
BC118571-1|AAI18572.1| 495|Homo sapiens nuclear receptor subfam... 89 4e-17
AL031228-12|CAI95621.1| 262|Homo sapiens retinoid X receptor, b... 89 4e-17
AF190464-2|AAG17124.1| 495|Homo sapiens hepatocytic transcripti... 89 4e-17
AF190464-1|AAG17125.1| 541|Homo sapiens hepatocytic transcripti... 89 4e-17
AF146343-1|AAD37378.1| 495|Homo sapiens CYP7A promoter binding ... 89 4e-17
AF124247-1|AAD26565.1| 541|Homo sapiens hepatocytic transcripti... 89 4e-17
AF049102-1|AAD03248.1| 323|Homo sapiens alpha1-fetoprotein tran... 89 4e-17
AB019246-1|BAA34092.1| 541|Homo sapiens FTZ-F1 related protein ... 89 4e-17
DQ923326-1|ABJ52966.1| 397|Homo sapiens orphan nuclear receptor... 89 5e-17
AF364606-3|AAK38721.1| 397|Homo sapiens orphan nuclear receptor... 89 5e-17
X87872-1|CAA61135.1| 408|Homo sapiens Hepatocyte nuclear factor... 88 7e-17
U72967-1|AAB48083.1| 408|Homo sapiens hepatocyte nuclear factor... 88 7e-17
AL132772-1|CAI18856.1| 417|Homo sapiens hepatocyte nuclear fact... 88 7e-17
DQ777076-1|ABG88022.1| 474|Homo sapiens estrogen receptor beta ... 88 9e-17
DQ838583-1|ABH09190.1| 472|Homo sapiens estrogen receptor beta ... 87 1e-16
DQ838582-1|ABH09189.1| 481|Homo sapiens estrogen receptor beta ... 87 1e-16
AF060555-1|AAC15234.1| 513|Homo sapiens estrogen receptor beta ... 87 1e-16
AF051428-1|AAC05751.1| 495|Homo sapiens estrogen receptor beta2... 87 1e-16
AB209620-1|BAD92857.1| 504|Homo sapiens estrogen receptor 2 (ER... 87 1e-16
AB006589-1|BAA31966.1| 495|Homo sapiens estrogen receptor beta ... 87 1e-16
U76388-1|AAB53105.1| 461|Homo sapiens steroidogenic factor 1 pr... 87 2e-16
D88155-1|BAA13546.1| 461|Homo sapiens AdBP4 protein. 87 2e-16
BC032501-1|AAH32501.1| 461|Homo sapiens nuclear receptor subfam... 87 2e-16
AL354979-3|CAI10959.1| 461|Homo sapiens nuclear receptor subfam... 87 2e-16
AL354979-2|CAI10958.1| 178|Homo sapiens nuclear receptor subfam... 87 2e-16
AL137846-2|CAI10872.1| 461|Homo sapiens nuclear receptor subfam... 87 2e-16
AJ009937-2|CAB55493.1| 420|Homo sapiens nuclear hormone recepto... 87 2e-16
AJ009937-1|CAB55492.1| 397|Homo sapiens nuclear hormone recepto... 87 2e-16
AC016543-1|AAG29619.1| 262|Homo sapiens hERRB2 protein. 85 8e-16
Y13276-1|CAA73725.1| 385|Homo sapiens Tailless protein protein. 84 1e-15
BC028031-1|AAH28031.1| 385|Homo sapiens nuclear receptor subfam... 84 1e-15
AL078596-1|CAB75626.1| 385|Homo sapiens nuclear receptor subfam... 84 1e-15
AK131541-1|BAD18677.1| 422|Homo sapiens protein ( Homo sapiens ... 84 1e-15
AF411525-1|AAL05871.1| 385|Homo sapiens nuclear receptor subfam... 84 1e-15
AF220532-1|AAG31945.1| 385|Homo sapiens orphan nuclear receptor... 84 1e-15
AY572819-1|AAT47172.1| 321|Homo sapiens constitutive androstane... 82 4e-15
X12794-1|CAA31282.1| 403|Homo sapiens protein ( Human v-erbA re... 80 2e-14
L31785-1|AAA65937.1| 579|Homo sapiens orphan nuclear hormone re... 80 2e-14
D16815-1|BAA20088.1| 579|Homo sapiens EAR-1r protein. 80 2e-14
BC070035-1|AAH70035.1| 408|Homo sapiens NR1D2 protein protein. 80 2e-14
BC045613-1|AAH45613.1| 579|Homo sapiens nuclear receptor subfam... 80 2e-14
CR457434-1|CAG33715.1| 579|Homo sapiens NR1D2 protein. 80 2e-14
AY572806-1|AAT47159.1| 322|Homo sapiens constitutive androstane... 80 2e-14
AF012304-1|AAC33511.1| 194|Homo sapiens nuclear mitotic apparat... 79 3e-14
X03348-1|CAA27054.1| 742|Homo sapiens beta-glucocorticoid recep... 79 4e-14
X03225-1|CAA26976.1| 777|Homo sapiens alpha-glucocorticoid rece... 79 4e-14
U80947-1|AAB64354.1| 742|Homo sapiens glucocorticoid receptor b... 79 4e-14
U80946-1|AAB64353.1| 777|Homo sapiens glucocorticoid receptor a... 79 4e-14
M24898-1|AAA52335.1| 614|Homo sapiens triiodothyronine receptor... 79 4e-14
DQ083391-1|AAZ32403.1| 184|Homo sapiens retinoic acid receptor ... 79 4e-14
BC056148-1|AAH56148.1| 614|Homo sapiens nuclear receptor subfam... 79 4e-14
BC047875-1|AAH47875.1| 614|Homo sapiens nuclear receptor subfam... 79 4e-14
BC015610-1|AAH15610.1| 777|Homo sapiens nuclear receptor subfam... 79 4e-14
AY436590-1|AAQ97180.1| 777|Homo sapiens nuclear receptor subfam... 79 4e-14
AM183262-1|CAJ65924.1| 751|Homo sapiens glucocorticoid receptor... 79 4e-14
AK223594-1|BAD97314.1| 777|Homo sapiens nuclear receptor subfam... 79 4e-14
BC084544-1|AAH84544.2| 404|Homo sapiens nuclear receptor subfam... 79 5e-14
BC063018-1|AAH63018.2| 404|Homo sapiens nuclear receptor subfam... 79 5e-14
BC002669-1|AAH02669.3| 404|Homo sapiens nuclear receptor subfam... 79 5e-14
AB209091-1|BAD92328.1| 549|Homo sapiens Orphan nuclear receptor... 79 5e-14
X72631-1|CAB53540.1| 614|Homo sapiens Rev-ErbAalpha protein pro... 78 7e-14
X03635-2|CAA27284.1| 595|Homo sapiens oestrogen receptor protein. 78 7e-14
U47678-1|AAB00115.1| 701|Homo sapiens 80 kDa estrogen receptor ... 78 7e-14
M12674-1|AAA52399.1| 595|Homo sapiens ESR protein. 78 7e-14
BC128574-1|AAI28575.1| 595|Homo sapiens estrogen receptor 1 pro... 78 7e-14
BC128573-1|AAI28574.1| 595|Homo sapiens estrogen receptor 1 pro... 78 7e-14
AY425004-1|AAQ91815.1| 595|Homo sapiens estrogen receptor 1 pro... 78 7e-14
AL590993-1|CAI14237.1| 595|Homo sapiens estrogen receptor 1 pro... 78 7e-14
AL356311-2|CAI21012.1| 595|Homo sapiens estrogen receptor 1 pro... 78 7e-14
AL078582-4|CAI42285.1| 595|Homo sapiens estrogen receptor 1 pro... 78 7e-14
AL049821-1|CAI22123.1| 595|Homo sapiens estrogen receptor 1 pro... 78 7e-14
AF123500-1|AAD52984.1| 444|Homo sapiens estrogen receptor alpha... 78 7e-14
M29960-1|AAA36761.1| 603|Homo sapiens protein ( Human steroid r... 77 1e-13
M29959-1|AAA36762.1| 467|Homo sapiens protein ( Human steroid r... 77 1e-13
M21985-1|AAA36650.1| 483|Homo sapiens protein ( Human steroid r... 77 1e-13
BC040141-1|AAH40141.1| 467|Homo sapiens nuclear receptor subfam... 77 1e-13
U22662-1|AAA85856.1| 447|Homo sapiens nuclear orphan receptor L... 77 2e-13
BC008819-1|AAH08819.1| 387|Homo sapiens NR1H3 protein protein. 77 2e-13
U01351-2|AAA16603.1| 778|Homo sapiens glucocorticoid receptor a... 76 3e-13
U14534-1|AAA58594.1| 455|Homo sapiens orphan receptor protein. 75 5e-13
U07132-1|AAA61783.1| 461|Homo sapiens Ner-I protein. 75 5e-13
U04897-1|AAA62658.1| 523|Homo sapiens RORalpha1 protein. 75 5e-13
CR456706-1|CAG32987.1| 461|Homo sapiens NR1H2 protein. 75 5e-13
BC074500-1|AAH74500.1| 461|Homo sapiens nuclear receptor subfam... 75 5e-13
BC047750-1|AAH47750.1| 461|Homo sapiens nuclear receptor subfam... 75 5e-13
BC033500-1|AAH33500.1| 461|Homo sapiens nuclear receptor subfam... 75 5e-13
BC008831-1|AAH08831.1| 523|Homo sapiens RAR-related orphan rece... 75 5e-13
BC007790-1|AAH07790.1| 461|Homo sapiens nuclear receptor subfam... 75 5e-13
AY542548-1|AAS48621.1| 81|Homo sapiens nuclear receptor AdBP4 ... 75 5e-13
U04899-1|AAA62660.1| 548|Homo sapiens RORalpha3 protein. 75 7e-13
U04898-1|AAA62659.1| 556|Homo sapiens RORalpha2 protein. 75 7e-13
L14611-1|AAA02963.1| 468|Homo sapiens transcription factor prot... 75 7e-13
BC100990-1|AAI00991.1| 468|Homo sapiens RAR-related orphan rece... 75 7e-13
BC100989-1|AAI00990.1| 468|Homo sapiens RAR-related orphan rece... 75 7e-13
BC100988-1|AAI00989.1| 468|Homo sapiens RAR-related orphan rece... 75 7e-13
BC100987-1|AAI00988.1| 468|Homo sapiens RAR-related orphan rece... 75 7e-13
U64876-1|AAB06335.1| 480|Homo sapiens nuclear orphan receptor p... 74 1e-12
U16997-1|AAA64751.1| 560|Homo sapiens ROR gamma protein. 74 1e-12
CR457436-1|CAG33717.1| 518|Homo sapiens RORC protein. 74 1e-12
BC110571-1|AAI10572.1| 518|Homo sapiens RAR-related orphan rece... 74 1e-12
BC031554-1|AAH31554.1| 518|Homo sapiens RAR-related orphan rece... 74 1e-12
BC007915-1|AAH07915.2| 320|Homo sapiens ESRRA protein protein. 74 1e-12
AL589765-18|CAI17180.1| 518|Homo sapiens RAR-related orphan rec... 74 1e-12
AL589765-17|CAI17179.1| 497|Homo sapiens RAR-related orphan rec... 74 1e-12
AK223137-1|BAD96857.1| 518|Homo sapiens RAR-related orphan rece... 74 1e-12
AF004291-1|AAC52054.1| 454|Homo sapiens germ cell nuclear facto... 74 2e-12
S83309-1|AAB50876.1| 476|Homo sapiens germ cell nuclear factor ... 73 3e-12
BC030600-1|AAH30600.1| 475|Homo sapiens nuclear receptor subfam... 73 3e-12
BC024181-1|AAH24181.1| 323|Homo sapiens ESR2 protein protein. 73 3e-12
AF124790-1|AAD32580.1| 323|Homo sapiens estrogen receptor beta2... 73 3e-12
AF074599-1|AAC25603.1| 381|Homo sapiens estrogen receptor beta ... 73 3e-12
Y08639-1|CAA69929.1| 459|Homo sapiens nuclear orphan receptor R... 73 4e-12
M69296-1|AAA58461.1| 336|Homo sapiens estrogen receptor-related... 73 4e-12
BC093774-1|AAH93774.1| 459|Homo sapiens RAR-related orphan rece... 73 4e-12
BC093772-1|AAH93772.1| 459|Homo sapiens RAR-related orphan rece... 73 4e-12
BC051830-1|AAH51830.1| 459|Homo sapiens RAR-related orphan rece... 73 4e-12
AL355674-1|CAD13280.2| 459|Homo sapiens RAR-related orphan rece... 73 4e-12
AL137018-1|CAD13276.2| 459|Homo sapiens RAR-related orphan rece... 73 4e-12
X99975-1|CAA68236.1| 480|Homo sapiens hRTR/hGCNF protein protein. 72 5e-12
U80802-1|AAB96828.1| 480|Homo sapiens orphan nuclear receptor G... 72 5e-12
AL354979-4|CAI10960.1| 479|Homo sapiens nuclear receptor subfam... 72 5e-12
AL354928-2|CAI39633.1| 479|Homo sapiens nuclear receptor subfam... 72 5e-12
AL158075-1|CAI13577.1| 479|Homo sapiens nuclear receptor subfam... 72 5e-12
AL132772-10|CAI18863.1| 100|Homo sapiens hepatocyte nuclear fac... 72 5e-12
AL117382-6|CAI23113.1| 100|Homo sapiens hepatocyte nuclear fact... 72 5e-12
L07592-1|AAA36469.1| 441|Homo sapiens peroxisome proliferator a... 72 6e-12
D85245-1|BAA12746.1| 325|Homo sapiens TR3beta protein. 72 6e-12
BC007578-1|AAH07578.1| 361|Homo sapiens PPARD protein protein. 72 6e-12
BC002715-1|AAH02715.1| 361|Homo sapiens PPARD protein protein. 72 6e-12
AY919140-1|AAX14041.1| 441|Homo sapiens peroxisome proliferator... 72 6e-12
AY442342-1|AAR05439.1| 441|Homo sapiens peroxisome proliferativ... 72 6e-12
AL022721-9|CAD92505.1| 361|Homo sapiens peroxisome proliferativ... 72 6e-12
AL022721-8|CAB38629.1| 441|Homo sapiens peroxisome proliferativ... 72 6e-12
AF246303-1|AAF62553.1| 441|Homo sapiens peroxisome proliferativ... 72 6e-12
AB099507-1|BAC78903.1| 161|Homo sapiens peroxisome proliferativ... 72 6e-12
U10990-1|AAC50118.1| 596|Homo sapiens hTAK1 protein. 71 1e-11
L27586-1|AAA21474.1| 615|Homo sapiens TR4 orphan receptor protein. 71 1e-11
M16801-1|AAA59571.1| 984|Homo sapiens MLR protein. 70 2e-11
BC111758-1|AAI11759.1| 867|Homo sapiens NR3C2 protein protein. 70 2e-11
BC051670-1|AAH51670.1| 530|Homo sapiens NR2C2 protein protein. 70 2e-11
AJ315514-1|CAC67405.1| 706|Homo sapiens mineralocorticoid recep... 70 2e-11
AB209056-1|BAD92293.1| 853|Homo sapiens nuclear receptor subfam... 70 2e-11
AJ276674-1|CAB82769.1| 410|Homo sapiens photoreceptor-specific ... 70 3e-11
AF148128-1|AAF22227.1| 367|Homo sapiens nuclear receptor protein. 70 3e-11
AF121129-1|AAD28301.1| 410|Homo sapiens photoreceptor-specific ... 70 3e-11
BC121121-1|AAI21122.1| 309|Homo sapiens nuclear receptor subfam... 69 4e-11
BC121120-1|AAI21121.1| 314|Homo sapiens nuclear receptor subfam... 69 4e-11
AY572813-1|AAT47166.1| 278|Homo sapiens constitutive androstane... 69 4e-11
AY572810-1|AAT47163.1| 309|Homo sapiens constitutive androstane... 69 4e-11
AC005601-1|AAC34207.1| 235|Homo sapiens glucocorticoid receptor... 69 4e-11
M35851-1|AAA51772.1| 917|Homo sapiens androgen receptor protein. 68 8e-11
M27430-1|AAA51886.1| 919|Homo sapiens AR protein. 68 8e-11
M23263-1|AAA51775.1| 918|Homo sapiens androgen receptor protein. 68 8e-11
M21748-1|AAA51771.1| 917|Homo sapiens androgen receptor protein. 68 8e-11
M20260-1|AAA51774.1| 452|Homo sapiens AR protein. 68 8e-11
M20132-1|AAA51729.1| 919|Homo sapiens AR protein. 68 8e-11
L29496-1|AAA51770.1| 734|Homo sapiens AR protein. 68 8e-11
BC132975-1|AAI32976.1| 914|Homo sapiens AR protein protein. 68 8e-11
AL356358-1|CAI40496.1| 920|Homo sapiens androgen receptor (dihy... 68 8e-11
AL158016-1|CAI40853.1| 920|Homo sapiens androgen receptor (dihy... 68 8e-11
AL049564-2|CAI43080.1| 920|Homo sapiens androgen receptor (dihy... 68 8e-11
DQ911122-1|ABJ52965.1| 434|Homo sapiens orphan nuclear receptor... 66 2e-10
BC054009-1|AAH54009.1| 80|Homo sapiens HNF4G protein protein. 66 2e-10
BC017304-1|AAH17304.2| 433|Homo sapiens NR1I2 protein protein. 66 2e-10
AY091855-1|AAM26736.1| 434|Homo sapiens steroid and xenobiotic ... 66 2e-10
AF364606-2|AAK38720.1| 434|Homo sapiens orphan nuclear receptor... 66 2e-10
AF364606-1|AAK38722.1| 473|Homo sapiens orphan nuclear receptor... 66 2e-10
AF084645-1|AAC64558.1| 434|Homo sapiens orphan nuclear receptor... 66 2e-10
AF084644-1|AAC64557.1| 473|Homo sapiens orphan nuclear receptor... 66 2e-10
AF061056-1|AAD05436.1| 434|Homo sapiens orphan nuclear receptor... 66 2e-10
AF068623-1|AAC63513.1| 440|Homo sapiens mineralocorticoid recep... 66 3e-10
X67482-1|CAA47824.1| 427|Homo sapiens HL-60 1,25-dihydroxyvitam... 66 4e-10
M34233-1|AAA51780.1| 906|Homo sapiens AR protein. 66 4e-10
J03258-1|AAA61273.1| 427|Homo sapiens VDR protein. 66 4e-10
BC060832-1|AAH60832.1| 427|Homo sapiens VDR protein protein. 66 4e-10
AY342401-1|AAP88938.1| 424|Homo sapiens vitamin D (1,25-dihydro... 66 4e-10
AF162704-1|AAD45921.1| 906|Homo sapiens androgen receptor protein. 66 4e-10
AF026260-1|AAB95155.1| 427|Homo sapiens vitamin D receptor prot... 66 4e-10
AB002168-1|BAA83389.1| 427|Homo sapiens vitamin D receptor prot... 66 4e-10
AJ009937-3|CAB55494.1| 342|Homo sapiens nuclear hormone recepto... 65 5e-10
AJ009936-2|CAB55490.1| 457|Homo sapiens nuclear hormone recepto... 64 1e-09
AJ009936-1|CAB55489.1| 434|Homo sapiens nuclear hormone recepto... 64 1e-09
S74349-1|AAB32649.1| 468|Homo sapiens peroxisome proliferator a... 64 2e-09
L02932-1|AAA36468.1| 468|Homo sapiens peroxisome proliferator a... 64 2e-09
CR457435-1|CAG33716.1| 468|Homo sapiens PPARA protein. 64 2e-09
CR456547-1|CAG30433.1| 468|Homo sapiens PPARA protein. 64 2e-09
BC000052-1|AAH00052.1| 258|Homo sapiens peroxisome proliferator... 64 2e-09
AY206718-1|AAO13489.1| 468|Homo sapiens peroxisome proliferativ... 64 2e-09
AL078611-2|CAI18764.1| 468|Homo sapiens peroxisome proliferativ... 64 2e-09
AL049856-1|CAI22450.1| 468|Homo sapiens peroxisome proliferativ... 64 2e-09
AF172069-1|AAD53276.1| 405|Homo sapiens fatty acid synthase/est... 63 2e-09
AF172068-1|AAD53275.1| 405|Homo sapiens fatty acid synthase/est... 63 2e-09
X51730-1|CAA36018.1| 933|Homo sapiens protein ( Human mRNA and ... 63 3e-09
M15716-1|AAA60081.1| 933|Homo sapiens progesterone receptor pro... 63 3e-09
AY525610-1|AAS00096.1| 933|Homo sapiens progesterone receptor p... 63 3e-09
AY382151-1|AAQ96833.1| 255|Homo sapiens progesterone receptor p... 63 3e-09
AF016381-1|AAD01587.1| 933|Homo sapiens progesterone receptor p... 63 3e-09
AB085845-1|BAC11013.1| 803|Homo sapiens delta 6/2 progesterone ... 63 3e-09
AB085844-1|BAC11012.1| 690|Homo sapiens delta4+6/2 progesterone... 63 3e-09
AB085683-1|BAC06585.1| 695|Homo sapiens Progesterone receptor p... 63 3e-09
AB084248-1|BAB91074.1| 831|Homo sapiens delta 4 progesterone re... 63 3e-09
M73069-1|AAA51735.1| 730|Homo sapiens androgen receptor protein. 62 5e-09
AY572823-1|AAT47176.1| 147|Homo sapiens constitutive androstane... 62 5e-09
AY572822-1|AAT47175.1| 147|Homo sapiens constitutive androstane... 62 5e-09
Y07619-1|CAA68898.1| 468|Homo sapiens peroxisome proliferator-a... 61 9e-09
BC033701-1|AAH33701.1| 299|Homo sapiens Similar to estrogen-rel... 61 9e-09
AY572826-1|AAT47179.1| 119|Homo sapiens constitutive androstane... 61 1e-08
Z75126-1|CAA99436.1| 195|Homo sapiens estrogen receptor protein. 60 2e-08
X90563-2|CAA62153.1| 475|Homo sapiens peroxisome proliferator a... 60 3e-08
X90563-1|CAA62152.1| 477|Homo sapiens peroxisome proliferator a... 60 3e-08
U79012-1|AAC51248.1| 505|Homo sapiens ligand activated transcri... 60 3e-08
U63415-1|AAB04028.1| 505|Homo sapiens peroxisome proliferator a... 60 3e-08
L40904-1|AAA80314.2| 477|Homo sapiens peroxisome proliferator a... 60 3e-08
D83233-1|BAA18949.1| 506|Homo sapiens PPAR gamma2 protein. 60 3e-08
BT007281-1|AAP35945.1| 477|Homo sapiens peroxisome proliferativ... 60 3e-08
BC006811-1|AAH06811.1| 477|Homo sapiens peroxisome proliferator... 60 3e-08
AY222643-1|AAO66458.1| 584|Homo sapiens CREB3L2-PPARgamma protein. 60 3e-08
AY157024-1|AAN38992.2| 475|Homo sapiens peroxisome proliferativ... 60 3e-08
AK223528-1|BAD97248.1| 478|Homo sapiens peroxisome proliferativ... 60 3e-08
AJ698135-1|CAG29019.1| 248|Homo sapiens peroxisome proliferativ... 60 3e-08
AJ563370-1|CAD91389.1| 264|Homo sapiens peroxisome proliferativ... 60 3e-08
AJ563369-1|CAD91388.1| 280|Homo sapiens peroxisome proliferativ... 60 3e-08
AB005526-1|BAA23354.1| 474|Homo sapiens peroxisome proliferator... 60 3e-08
DQ356894-1|ABC97372.1| 186|Homo sapiens peroxisome proliferativ... 58 8e-08
U32592-1|AAA75332.1| 56|Homo sapiens steroidogenic factor 1 pr... 56 3e-07
M65208-1|AAA61274.1| 67|Homo sapiens vitamin D receptor protein. 56 3e-07
M69297-1|AAA58462.1| 220|Homo sapiens estrogen receptor-related... 55 6e-07
AC106889-1|AAY41033.1| 46|Homo sapiens unknown protein. 53 3e-06
AY572827-1|AAT47180.1| 319|Homo sapiens constitutive androstane... 50 2e-05
AB085843-1|BAC11011.1| 764|Homo sapiens delta 3+6/2 progesteron... 50 2e-05
X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest... 50 2e-05
X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest... 50 2e-05
AJ009936-3|CAB55491.1| 379|Homo sapiens nuclear hormone recepto... 49 4e-05
M24900-1|AAA52332.1| 136|Homo sapiens triiodothyronine receptor... 49 5e-05
AY572811-1|AAT47164.1| 324|Homo sapiens constitutive androstane... 49 5e-05
AF319970-1|AAK07421.1| 102|Homo sapiens retinoic acid receptor ... 49 5e-05
AC008050-1|AAG17472.1| 237|Homo sapiens hERRB2 protein. 48 1e-04
BC041421-1|AAH41421.1| 322|Homo sapiens NR2E3 protein protein. 46 5e-04
S82307-1|AAB47194.2| 133|Homo sapiens p65 protein. 42 0.008
AY572818-1|AAT47171.1| 288|Homo sapiens constitutive androstane... 42 0.008
AY572812-1|AAT47165.1| 297|Homo sapiens constitutive androstane... 41 0.013
AY572817-1|AAT47170.1| 293|Homo sapiens constitutive androstane... 40 0.024
AB009577-1|BAB18655.1| 34|Homo sapiens Ad4BP protein. 40 0.031
AJ002425-1|CAA05410.2| 614|Homo sapiens protein protein. 39 0.054
BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein. 38 0.095
AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens ... 38 0.13
D88575-1|BAA31232.1| 380|Homo sapiens TP55 protein. 37 0.22
BC106744-1|AAI06745.1| 380|Homo sapiens serpin peptidase inhibi... 37 0.22
BC106743-1|AAI06744.1| 380|Homo sapiens serpin peptidase inhibi... 37 0.22
BC069547-1|AAH69547.1| 380|Homo sapiens serpin peptidase inhibi... 37 0.22
BC069442-1|AAH69442.1| 380|Homo sapiens serpin peptidase inhibi... 37 0.22
BC069417-1|AAH69417.1| 380|Homo sapiens serpin peptidase inhibi... 37 0.22
AK222853-1|BAD96573.1| 528|Homo sapiens Wolf-Hirschhorn syndrom... 37 0.22
AF027866-1|AAC64506.1| 380|Homo sapiens megsin protein. 37 0.22
U79666-1|AAB64179.1| 2505|Homo sapiens alpha1A-voltage-dependent... 36 0.29
BC002764-1|AAH02764.2| 528|Homo sapiens Wolf-Hirschhorn syndrom... 36 0.29
AL132868-2|CAM15219.1| 539|Homo sapiens Wolf-Hirschhorn syndrom... 36 0.29
AF131751-1|AAD20034.1| 265|Homo sapiens human Wolf-Hirschhorn s... 36 0.29
AF101434-1|AAC72982.1| 525|Homo sapiens Wolf-Hirschhorn syndrom... 36 0.29
AF004884-1|AAB61613.1| 2510|Homo sapiens neuronal calcium channe... 36 0.29
AB044549-1|BAB18651.1| 549|Homo sapiens Wolf-Hirshhorn syndrome... 36 0.29
X04014-1|CAA27637.1| 173|Homo sapiens hypothetical protein prot... 36 0.38
M57445-1|AAA58728.1| 49|Homo sapiens retinoic acid receptor pr... 36 0.38
BX842568-3|CAI40150.1| 1035|Homo sapiens family with sequence si... 36 0.38
AK125992-1|BAC86381.1| 910|Homo sapiens protein ( Homo sapiens ... 36 0.38
BC027951-1|AAH27951.1| 672|Homo sapiens C20orf32 protein protein. 36 0.51
AL121914-13|CAC12719.2| 786|Homo sapiens chromosome 20 open rea... 36 0.51
AJ276678-1|CAC00655.1| 785|Homo sapiens HEF like Protein protein. 36 0.51
AF528099-1|AAO62630.1| 2948|Homo sapiens transforming acidic coi... 35 0.67
L20965-1|AAA03588.1| 886|Homo sapiens phosphodiesterase protein. 35 0.88
BC069651-1|AAH69651.1| 274|Homo sapiens NR1I3 protein protein. 35 0.88
AF069491-1|AAC35012.1| 886|Homo sapiens cAMP specific phosphodi... 35 0.88
BC013013-1|AAH13013.1| 670|Homo sapiens zinc finger protein 526... 34 1.2
AL590383-2|CAH71374.1| 2099|Homo sapiens zinc finger protein 318... 34 1.2
AL583834-1|CAI14459.1| 2099|Homo sapiens zinc finger protein 318... 34 1.2
AF130464-1|AAD28756.2| 1032|Homo sapiens sec24D protein protein. 34 1.2
AF121141-1|AAD17298.1| 2099|Homo sapiens endocrine regulator pro... 34 1.2
AF090114-1|AAD47387.1| 2099|Homo sapiens unknown protein. 34 1.2
AB075831-1|BAB85537.1| 679|Homo sapiens KIAA1951 protein protein. 34 1.2
AB018298-1|BAA34475.2| 1093|Homo sapiens KIAA0755 protein protein. 34 1.2
L35240-1|AAC37565.1| 455|Homo sapiens enigma protein protein. 34 1.5
BC117221-1|AAI17222.1| 1205|Homo sapiens SEC31 homolog A (S. cer... 34 1.5
BC033492-1|AAH33492.2| 753|Homo sapiens SRY (sex determining re... 34 1.5
BC009062-1|AAH09062.1| 198|Homo sapiens Unknown (protein for IM... 34 1.5
AL135793-9|CAI95134.1| 2948|Homo sapiens transforming, acidic co... 34 1.5
AL135793-7|CAI95132.1| 2675|Homo sapiens transforming, acidic co... 34 1.5
AK125897-1|BAC86336.1| 969|Homo sapiens protein ( Homo sapiens ... 34 1.5
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 34 1.5
AB022083-1|BAA37146.1| 753|Homo sapiens SOX30 protein protein. 34 1.5
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 34 1.5
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 34 1.5
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 34 1.5
Y18265-1|CAB41400.1| 1324|Homo sapiens zinc finger protein SALL1... 33 2.0
Y18264-1|CAB41399.1| 1324|Homo sapiens zinc finger protein SALL1... 33 2.0
BC051824-1|AAH51824.1| 1122|Homo sapiens histone deacetylase 5 p... 33 2.0
BC025688-1|AAH25688.1| 377|Homo sapiens mucin 7, secreted protein. 33 2.0
BC013140-1|AAH13140.1| 363|Homo sapiens Unknown (protein for IM... 33 2.0
AY572820-1|AAT47173.1| 263|Homo sapiens constitutive androstane... 33 2.0
AF132608-1|AAD29047.1| 1122|Homo sapiens histone deacetylase 5 p... 33 2.0
AF039691-1|AAC18040.1| 897|Homo sapiens antigen NY-CO-9 protein. 33 2.0
AB011172-1|BAA25526.2| 1080|Homo sapiens KIAA0600 protein protein. 33 2.0
U79667-1|AAB49677.1| 1182|Homo sapiens alpha1A-voltage-dependent... 33 2.7
U79665-1|AAB49676.1| 1194|Homo sapiens alpha1A-voltage-sensitive... 33 2.7
L07518-1|AAB61945.1| 505|Homo sapiens mucin protein. 33 2.7
BC053992-1|AAH53992.1| 1312|Homo sapiens serine arginine-rich pr... 33 2.7
BC040516-1|AAH40516.1| 859|Homo sapiens SGIP1 protein protein. 33 2.7
AL356913-3|CAI22672.1| 859|Homo sapiens SH3-domain GRB2-like (e... 33 2.7
AL356913-2|CAI22674.1| 828|Homo sapiens SH3-domain GRB2-like (e... 33 2.7
AL354978-6|CAH71846.1| 828|Homo sapiens SH3-domain GRB2-like (e... 33 2.7
AL354978-5|CAH71845.1| 859|Homo sapiens SH3-domain GRB2-like (e... 33 2.7
AL139147-4|CAI21943.1| 828|Homo sapiens SH3-domain GRB2-like (e... 33 2.7
AL139147-2|CAI21942.1| 859|Homo sapiens SH3-domain GRB2-like (e... 33 2.7
AK024444-1|BAB15734.1| 1343|Homo sapiens FLJ00034 protein protein. 33 2.7
AF254411-1|AAF87552.1| 1312|Homo sapiens ser/arg-rich pre-mRNA s... 33 2.7
AF100774-1|AAC77460.1| 980|Homo sapiens voltage-dependent P/Q t... 33 2.7
AB210039-1|BAE06121.1| 856|Homo sapiens DKFZp761D221 variant pr... 33 2.7
X73067-1|CAA51528.1| 107|Homo sapiens estrogen receptor protein. 33 3.6
M34340-1|AAA36562.2| 70|Homo sapiens putative Rev-ErbA-alpha p... 33 3.6
BC117318-1|AAI17319.1| 506|Homo sapiens glial cells missing hom... 33 3.6
BC117316-1|AAI17317.1| 506|Homo sapiens glial cells missing hom... 33 3.6
BC109231-1|AAI09232.1| 269|Homo sapiens STAC2 protein protein. 33 3.6
BC069603-1|AAH69603.1| 506|Homo sapiens glial cells missing hom... 33 3.6
BC068482-1|AAH68482.1| 1002|Homo sapiens calmin (calponin-like, ... 33 3.6
BC032699-1|AAH32699.1| 678|Homo sapiens Unknown (protein for IM... 33 3.6
BC025251-1|AAH25251.1| 687|Homo sapiens CLMN protein protein. 33 3.6
AL357497-1|CAI16225.1| 506|Homo sapiens glial cells missing hom... 33 3.6
AL117526-1|CAB55978.1| 854|Homo sapiens hypothetical protein pr... 33 3.6
AL024498-1|CAI20518.1| 506|Homo sapiens glial cells missing hom... 33 3.6
AK131500-1|BAD18644.1| 411|Homo sapiens protein ( Homo sapiens ... 33 3.6
AK025226-1|BAB15087.1| 868|Homo sapiens protein ( Homo sapiens ... 33 3.6
AK022445-1|BAB14036.1| 543|Homo sapiens protein ( Homo sapiens ... 33 3.6
AK022279-1|BAB13999.1| 628|Homo sapiens .117). protein. 33 3.6
AJ608762-1|CAE75539.1| 411|Homo sapiens 24b2/STAC2 protein prot... 33 3.6
AF091149-1|AAC98097.1| 506|Homo sapiens glide/gcm protein homol... 33 3.6
AF079550-1|AAC33792.1| 506|Homo sapiens glial cells missing pro... 33 3.6
AB047979-1|BAB59010.1| 1002|Homo sapiens calmin protein. 33 3.6
AB033014-1|BAA86502.1| 339|Homo sapiens KIAA1188 protein protein. 33 3.6
BC113443-1|AAI13444.1| 943|Homo sapiens SAPS1 protein protein. 32 4.7
>D49728-1|BAA08565.1| 598|Homo sapiens DNA binding protein protein.
Length = 598
Score = 391 bits (962), Expect = e-108
Identities = 194/369 (52%), Positives = 246/369 (66%), Gaps = 4/369 (1%)
Query: 200 MQPSTPNSASSSPGVAPADNTGPRA-APSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFK 258
+ P++P+ S P +T R+ AP CAVCGD A+CQHYGVRTCEGCKGFFK
Sbjct: 233 LAPTSPHLEGSGILDTPVTSTKARSGAPGGSEGRCAVCGDNASCQHYGVRTCEGCKGFFK 292
Query: 259 RTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXX 318
RTVQK +KY+CLA K CPVD CLAVGMVKEVVRTDSLKGRRGRL
Sbjct: 293 RTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSK 352
Query: 319 XXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSL 378
L+T+LVRAH+D+ P A LDYS+++E D + QFY L
Sbjct: 353 PKQPPDASPAN---LLTSLVRAHLDSGPSTAKLDYSKFQELVLPHFGKEDAGDVQQFYDL 409
Query: 379 LTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLV 438
L+ S+++I+ +AEK+PG+ +L P D++ L SA LELF+LRLAYR++ + KL FC+GLV
Sbjct: 410 LSGSLEVIRKWAEKIPGFAELSPADQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLV 469
Query: 439 LDKRQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLITDRHGLKEPHRVEQLQM 498
L + QC R FGDW+ ++L FS +LHS+ +D+ FACL AL LITDRHGL+EP RVE+LQ
Sbjct: 470 LHRLQCARGFGDWIDSILAFSRSLHSLLVDVPAFACLSALVLITDRHGLQEPRRVEELQN 529
Query: 499 KIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIE 558
+I CL+ H+ A SR+LG LPELR+L QGLQRIF LKLEDLVP PP+I+
Sbjct: 530 RIASCLKEHVAAVAGEPQPASCLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIID 589
Query: 559 NMFRASLPF 567
+F +LPF
Sbjct: 590 KIFMDTLPF 598
>BT007144-1|AAP35808.1| 598|Homo sapiens nuclear receptor subfamily
4, group A, member 1 protein.
Length = 598
Score = 391 bits (962), Expect = e-108
Identities = 194/369 (52%), Positives = 246/369 (66%), Gaps = 4/369 (1%)
Query: 200 MQPSTPNSASSSPGVAPADNTGPRA-APSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFK 258
+ P++P+ S P +T R+ AP CAVCGD A+CQHYGVRTCEGCKGFFK
Sbjct: 233 LAPTSPHLEGSGILDTPVTSTKARSGAPGGSEGRCAVCGDNASCQHYGVRTCEGCKGFFK 292
Query: 259 RTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXX 318
RTVQK +KY+CLA K CPVD CLAVGMVKEVVRTDSLKGRRGRL
Sbjct: 293 RTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSK 352
Query: 319 XXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSL 378
L+T+LVRAH+D+ P A LDYS+++E D + QFY L
Sbjct: 353 PKQPPDASPAN---LLTSLVRAHLDSGPSTAKLDYSKFQELVLPHFGKEDAGDVQQFYDL 409
Query: 379 LTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLV 438
L+ S+++I+ +AEK+PG+ +L P D++ L SA LELF+LRLAYR++ + KL FC+GLV
Sbjct: 410 LSGSLEVIRKWAEKIPGFAELSPADQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLV 469
Query: 439 LDKRQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLITDRHGLKEPHRVEQLQM 498
L + QC R FGDW+ ++L FS +LHS+ +D+ FACL AL LITDRHGL+EP RVE+LQ
Sbjct: 470 LHRLQCARGFGDWIDSILAFSRSLHSLLVDVPAFACLSALVLITDRHGLQEPRRVEELQN 529
Query: 499 KIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIE 558
+I CL+ H+ A SR+LG LPELR+L QGLQRIF LKLEDLVP PP+I+
Sbjct: 530 RIASCLKEHVAAVAGEPQPASCLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIID 589
Query: 559 NMFRASLPF 567
+F +LPF
Sbjct: 590 KIFMDTLPF 598
>BC016147-1|AAH16147.1| 598|Homo sapiens nuclear receptor subfamily
4, group A, member 1 protein.
Length = 598
Score = 391 bits (962), Expect = e-108
Identities = 194/369 (52%), Positives = 246/369 (66%), Gaps = 4/369 (1%)
Query: 200 MQPSTPNSASSSPGVAPADNTGPRA-APSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFK 258
+ P++P+ S P +T R+ AP CAVCGD A+CQHYGVRTCEGCKGFFK
Sbjct: 233 LAPTSPHLEGSGILDTPVTSTKARSGAPGGSEGRCAVCGDNASCQHYGVRTCEGCKGFFK 292
Query: 259 RTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXX 318
RTVQK +KY+CLA K CPVD CLAVGMVKEVVRTDSLKGRRGRL
Sbjct: 293 RTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSK 352
Query: 319 XXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSL 378
L+T+LVRAH+D+ P A LDYS+++E D + QFY L
Sbjct: 353 PKQPPDASPAN---LLTSLVRAHLDSGPSTAKLDYSKFQELVLPHFGKEDAGDVQQFYDL 409
Query: 379 LTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLV 438
L+ S+++I+ +AEK+PG+ +L P D++ L SA LELF+LRLAYR++ + KL FC+GLV
Sbjct: 410 LSGSLEVIRKWAEKIPGFAELSPADQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLV 469
Query: 439 LDKRQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLITDRHGLKEPHRVEQLQM 498
L + QC R FGDW+ ++L FS +LHS+ +D+ FACL AL LITDRHGL+EP RVE+LQ
Sbjct: 470 LHRLQCARGFGDWIDSILAFSRSLHSLLVDVPAFACLSALVLITDRHGLQEPRRVEELQN 529
Query: 499 KIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIE 558
+I CL+ H+ A SR+LG LPELR+L QGLQRIF LKLEDLVP PP+I+
Sbjct: 530 RIASCLKEHVAAVAGEPQPASCLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIID 589
Query: 559 NMFRASLPF 567
+F +LPF
Sbjct: 590 KIFMDTLPF 598
>CR456704-1|CAG32985.1| 598|Homo sapiens NR4A1 protein.
Length = 598
Score = 390 bits (961), Expect = e-108
Identities = 194/369 (52%), Positives = 246/369 (66%), Gaps = 4/369 (1%)
Query: 200 MQPSTPNSASSSPGVAPADNTGPRA-APSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFK 258
+ P++P+ S P +T R+ AP CAVCGD A+CQHYGVRTCEGCKGFFK
Sbjct: 233 LAPTSPHLEGSGILDTPVTSTKARSGAPGGSEGRCAVCGDNASCQHYGVRTCEGCKGFFK 292
Query: 259 RTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXX 318
RTVQK +KY+CLA K CPVD CLAVGMVKEVVRTDSLKGRRGRL
Sbjct: 293 RTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSK 352
Query: 319 XXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSL 378
L+T+LVRAH+D+ P A LDYS+++E D + QFY L
Sbjct: 353 PKQPPDAFPAN---LLTSLVRAHLDSGPSTAKLDYSKFQELVLPHFGKEDAGDVQQFYDL 409
Query: 379 LTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLV 438
L+ S+++I+ +AEK+PG+ +L P D++ L SA LELF+LRLAYR++ + KL FC+GLV
Sbjct: 410 LSGSLEVIRKWAEKIPGFAELSPADQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLV 469
Query: 439 LDKRQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLITDRHGLKEPHRVEQLQM 498
L + QC R FGDW+ ++L FS +LHS+ +D+ FACL AL LITDRHGL+EP RVE+LQ
Sbjct: 470 LHRLQCARGFGDWIDSILAFSRSLHSLLVDVPAFACLSALVLITDRHGLQEPRRVEELQN 529
Query: 499 KIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIE 558
+I CL+ H+ A SR+LG LPELR+L QGLQRIF LKLEDLVP PP+I+
Sbjct: 530 RIASCLKEHVAAVAGEPQPASCLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIID 589
Query: 559 NMFRASLPF 567
+F +LPF
Sbjct: 590 KIFMDTLPF 598
>AK223625-1|BAD97345.1| 598|Homo sapiens nuclear receptor subfamily
4, group A, member 2 isoform a variant protein.
Length = 598
Score = 390 bits (961), Expect = e-108
Identities = 190/347 (54%), Positives = 240/347 (69%), Gaps = 1/347 (0%)
Query: 222 PRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXX 281
P P S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA K+CPVD
Sbjct: 252 PSRGPPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRR 311
Query: 282 XXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXX-XXLITALVRA 340
CLAVGMVKEVVRTDSLKGRRGRL LI+ALVRA
Sbjct: 312 RNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPPSPPVSLISALVRA 371
Query: 341 HVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLC 400
HVD++P +LDYS+++ + D + I QFY LLT S+++I+ +AEK+PG+ DL
Sbjct: 372 HVDSNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLP 431
Query: 401 PEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRSFGDWLHAVLDFSN 460
D++ LF SA LELFVLRLAYR+ + KL FCNG+VL + QC R FG+W+ ++++FS+
Sbjct: 432 KADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVRGFGEWIDSIVEFSS 491
Query: 461 TLHSMDIDISTFACLCALTLITDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPH 520
L +M+IDIS F+C+ AL ++T+RHGLKEP RVE+LQ KI+ CL+ H+ +
Sbjct: 492 NLQNMNIDISAFSCIAALAMVTERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPNY 551
Query: 521 FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASLPF 567
S++LG LPELR+L QGLQRIF LKLEDLVP P +I+ +F +LPF
Sbjct: 552 LSKLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPAIIDKLFLDTLPF 598
Score = 33.5 bits (73), Expect = 2.0
Identities = 42/168 (25%), Positives = 63/168 (37%), Gaps = 23/168 (13%)
Query: 46 IVPEF-KSQRDTSFSETSSPIPGPALPSFEETYSVRYPKHEMAEFGIKMDEDCYNVSAYS 104
+ PEF K D + +E ++ P+ +F + YS Y + + + ++
Sbjct: 35 LTPEFVKFSMDLTNTEITATTSLPSFSTFMDNYSTGYDVKPPCLYQMPLSGQQSSIKVED 94
Query: 105 HQGHTSTQLLYQYHQPP-----IPYVPSTYYAPPQPCSPTFDTVTPNQDSYSLPPFPSTV 159
Q H Q H PP +P+ S YY P P +PT TP P +
Sbjct: 95 IQMHNYQQ---HSHLPPQSEEMMPHSGSVYYKPSSPPTPT----TPGFQVQHSPMWDDPG 147
Query: 160 DLH------ISAEQAARQRRSSLPVQRSESNSSNDSPKLHGTRVHCMQ 201
LH ++ QR++ PV R S SP GT V Q
Sbjct: 148 SLHNFHQNYVATTHMIEQRKT--PVSRLSLFSFKQSPP--GTPVSSCQ 191
>L13740-1|AAA36763.1| 598|Homo sapiens TR3 orphan receptor protein.
Length = 598
Score = 389 bits (958), Expect = e-107
Identities = 193/369 (52%), Positives = 246/369 (66%), Gaps = 4/369 (1%)
Query: 200 MQPSTPNSASSSPGVAPADNTGPRAAPSSPSQ-LCAVCGDTAACQHYGVRTCEGCKGFFK 258
+ P++P+ S P +T R+ PS+ CAVCGD A+CQHYGVRTCEGCKGFFK
Sbjct: 233 LAPTSPHLEGSGILDTPVTSTKARSGAPGPSEGRCAVCGDNASCQHYGVRTCEGCKGFFK 292
Query: 259 RTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXX 318
RTVQK +KY+CLA K CPVD CLAVGMVKEVVRTDSLKGRRGRL
Sbjct: 293 RTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSK 352
Query: 319 XXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSL 378
L+T+LV AH+D+ P A LDYS+++E D + QFY L
Sbjct: 353 PKQPPDASPAN---LLTSLVLAHLDSGPSTAKLDYSKFQELVLPHFGKEDAGDVQQFYDL 409
Query: 379 LTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLV 438
L+ S+++I+ +AEK+PG+ +L P D++ L SA LELF+LRLAYR++ + KL FC+GLV
Sbjct: 410 LSGSLEVIRKWAEKIPGFAELSPADQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLV 469
Query: 439 LDKRQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLITDRHGLKEPHRVEQLQM 498
L + QC R FGDW+ ++L FS +LHS+ +D+ FACL AL LITDRHGL+EP RVE+LQ
Sbjct: 470 LHRLQCARGFGDWIDSILAFSRSLHSLLVDVPAFACLSALVLITDRHGLQEPRRVEELQN 529
Query: 499 KIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIE 558
+I CL+ H+ A SR+LG LPELR+L QGLQRIF LKLEDLVP PP+I+
Sbjct: 530 RIASCLKEHVAAVAGEPQPASCLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIID 589
Query: 559 NMFRASLPF 567
+F +LPF
Sbjct: 590 KIFMDTLPF 598
>X75918-1|CAA53518.1| 598|Homo sapiens NOT protein.
Length = 598
Score = 388 bits (956), Expect = e-107
Identities = 190/346 (54%), Positives = 242/346 (69%), Gaps = 2/346 (0%)
Query: 223 RAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXX 282
R +PS+ LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA K+CPVD
Sbjct: 254 RGSPSNEG-LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRR 312
Query: 283 XXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRL-XXXXXXXXXXXXXXXXXLITALVRAH 341
CLAVGMVKEVVRTDSLKGRRGRL LI+ALVRAH
Sbjct: 313 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPPSPPVSLISALVRAH 372
Query: 342 VDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCP 401
VD++P +LDYS+++ + D + I QFY LLT S+++I+ +AEK+PG+ DL
Sbjct: 373 VDSNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPK 432
Query: 402 EDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRSFGDWLHAVLDFSNT 461
D++ LF SA LELFVLRLAYR+ + KL FCNG+VL + QC R FG+W+ ++++FS+
Sbjct: 433 ADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVRGFGEWIDSIVEFSSN 492
Query: 462 LHSMDIDISTFACLCALTLITDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHF 521
L +M+IDIS F+C+ AL ++T+RHGLKEP RVE+LQ KI+ CL+ H+ +
Sbjct: 493 LQNMNIDISAFSCIAALAMVTERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPNYL 552
Query: 522 SRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASLPF 567
S++LG LPELR+L QGLQRIF LKLEDLVP P +I+ +F +LPF
Sbjct: 553 SKLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPAIIDKLFLDTLPF 598
Score = 33.5 bits (73), Expect = 2.0
Identities = 42/168 (25%), Positives = 63/168 (37%), Gaps = 23/168 (13%)
Query: 46 IVPEF-KSQRDTSFSETSSPIPGPALPSFEETYSVRYPKHEMAEFGIKMDEDCYNVSAYS 104
+ PEF K D + +E ++ P+ +F + YS Y + + + ++
Sbjct: 35 LTPEFVKFSMDLTNTEITATTSLPSFSTFMDNYSTGYDVKPPCLYQMPLSGQQSSIKVED 94
Query: 105 HQGHTSTQLLYQYHQPP-----IPYVPSTYYAPPQPCSPTFDTVTPNQDSYSLPPFPSTV 159
Q H Q H PP +P+ S YY P P +PT TP P +
Sbjct: 95 IQMHNYQQ---HSHLPPQSEEMMPHSGSVYYKPSSPPTPT----TPGFQVQHSPMWDDPG 147
Query: 160 DLH------ISAEQAARQRRSSLPVQRSESNSSNDSPKLHGTRVHCMQ 201
LH ++ QR++ PV R S SP GT V Q
Sbjct: 148 SLHNFHQNYVATTHMIEQRKT--PVSRLSLFSFKQSPP--GTPVSSCQ 191
>BC066890-1|AAH66890.1| 535|Homo sapiens nuclear receptor subfamily
4, group A, member 2 protein.
Length = 535
Score = 388 bits (956), Expect = e-107
Identities = 190/346 (54%), Positives = 242/346 (69%), Gaps = 2/346 (0%)
Query: 223 RAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXX 282
R +PS+ LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA K+CPVD
Sbjct: 191 RGSPSNEG-LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRR 249
Query: 283 XXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRL-XXXXXXXXXXXXXXXXXLITALVRAH 341
CLAVGMVKEVVRTDSLKGRRGRL LI+ALVRAH
Sbjct: 250 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPPSPPVSLISALVRAH 309
Query: 342 VDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCP 401
VD++P +LDYS+++ + D + I QFY LLT S+++I+ +AEK+PG+ DL
Sbjct: 310 VDSNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPK 369
Query: 402 EDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRSFGDWLHAVLDFSNT 461
D++ LF SA LELFVLRLAYR+ + KL FCNG+VL + QC R FG+W+ ++++FS+
Sbjct: 370 ADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVRGFGEWIDSIVEFSSN 429
Query: 462 LHSMDIDISTFACLCALTLITDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHF 521
L +M+IDIS F+C+ AL ++T+RHGLKEP RVE+LQ KI+ CL+ H+ +
Sbjct: 430 LQNMNIDISAFSCIAALAMVTERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPNYL 489
Query: 522 SRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASLPF 567
S++LG LPELR+L QGLQRIF LKLEDLVP P +I+ +F +LPF
Sbjct: 490 SKLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPAIIDKLFLDTLPF 535
>BC009288-1|AAH09288.1| 598|Homo sapiens nuclear receptor subfamily
4, group A, member 2 protein.
Length = 598
Score = 388 bits (956), Expect = e-107
Identities = 190/346 (54%), Positives = 242/346 (69%), Gaps = 2/346 (0%)
Query: 223 RAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXX 282
R +PS+ LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA K+CPVD
Sbjct: 254 RGSPSNEG-LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRR 312
Query: 283 XXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRL-XXXXXXXXXXXXXXXXXLITALVRAH 341
CLAVGMVKEVVRTDSLKGRRGRL LI+ALVRAH
Sbjct: 313 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPPSPPVSLISALVRAH 372
Query: 342 VDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCP 401
VD++P +LDYS+++ + D + I QFY LLT S+++I+ +AEK+PG+ DL
Sbjct: 373 VDSNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPK 432
Query: 402 EDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRSFGDWLHAVLDFSNT 461
D++ LF SA LELFVLRLAYR+ + KL FCNG+VL + QC R FG+W+ ++++FS+
Sbjct: 433 ADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVRGFGEWIDSIVEFSSN 492
Query: 462 LHSMDIDISTFACLCALTLITDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHF 521
L +M+IDIS F+C+ AL ++T+RHGLKEP RVE+LQ KI+ CL+ H+ +
Sbjct: 493 LQNMNIDISAFSCIAALAMVTERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPNYL 552
Query: 522 SRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASLPF 567
S++LG LPELR+L QGLQRIF LKLEDLVP P +I+ +F +LPF
Sbjct: 553 SKLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPAIIDKLFLDTLPF 598
Score = 33.5 bits (73), Expect = 2.0
Identities = 42/168 (25%), Positives = 63/168 (37%), Gaps = 23/168 (13%)
Query: 46 IVPEF-KSQRDTSFSETSSPIPGPALPSFEETYSVRYPKHEMAEFGIKMDEDCYNVSAYS 104
+ PEF K D + +E ++ P+ +F + YS Y + + + ++
Sbjct: 35 LTPEFVKFSMDLTNTEITATTSLPSFSTFMDNYSTGYDVKPPCLYQMPLSGQQSSIKVED 94
Query: 105 HQGHTSTQLLYQYHQPP-----IPYVPSTYYAPPQPCSPTFDTVTPNQDSYSLPPFPSTV 159
Q H Q H PP +P+ S YY P P +PT TP P +
Sbjct: 95 IQMHNYQQ---HSHLPPQSEEMMPHSGSVYYKPSSPPTPT----TPGFQVQHSPMWDDPG 147
Query: 160 DLH------ISAEQAARQRRSSLPVQRSESNSSNDSPKLHGTRVHCMQ 201
LH ++ QR++ PV R S SP GT V Q
Sbjct: 148 SLHNFHQNYVATTHMIEQRKT--PVSRLSLFSFKQSPP--GTPVSSCQ 191
>AC074099-1|AAY24203.1| 598|Homo sapiens unknown protein.
Length = 598
Score = 388 bits (956), Expect = e-107
Identities = 190/346 (54%), Positives = 242/346 (69%), Gaps = 2/346 (0%)
Query: 223 RAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXX 282
R +PS+ LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA K+CPVD
Sbjct: 254 RGSPSNEG-LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRR 312
Query: 283 XXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRL-XXXXXXXXXXXXXXXXXLITALVRAH 341
CLAVGMVKEVVRTDSLKGRRGRL LI+ALVRAH
Sbjct: 313 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPPSPPVSLISALVRAH 372
Query: 342 VDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCP 401
VD++P +LDYS+++ + D + I QFY LLT S+++I+ +AEK+PG+ DL
Sbjct: 373 VDSNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPK 432
Query: 402 EDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRSFGDWLHAVLDFSNT 461
D++ LF SA LELFVLRLAYR+ + KL FCNG+VL + QC R FG+W+ ++++FS+
Sbjct: 433 ADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVRGFGEWIDSIVEFSSN 492
Query: 462 LHSMDIDISTFACLCALTLITDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHF 521
L +M+IDIS F+C+ AL ++T+RHGLKEP RVE+LQ KI+ CL+ H+ +
Sbjct: 493 LQNMNIDISAFSCIAALAMVTERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPNYL 552
Query: 522 SRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASLPF 567
S++LG LPELR+L QGLQRIF LKLEDLVP P +I+ +F +LPF
Sbjct: 553 SKLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPAIIDKLFLDTLPF 598
Score = 33.5 bits (73), Expect = 2.0
Identities = 42/168 (25%), Positives = 63/168 (37%), Gaps = 23/168 (13%)
Query: 46 IVPEF-KSQRDTSFSETSSPIPGPALPSFEETYSVRYPKHEMAEFGIKMDEDCYNVSAYS 104
+ PEF K D + +E ++ P+ +F + YS Y + + + ++
Sbjct: 35 LTPEFVKFSMDLTNTEITATTSLPSFSTFMDNYSTGYDVKPPCLYQMPLSGQQSSIKVED 94
Query: 105 HQGHTSTQLLYQYHQPP-----IPYVPSTYYAPPQPCSPTFDTVTPNQDSYSLPPFPSTV 159
Q H Q H PP +P+ S YY P P +PT TP P +
Sbjct: 95 IQMHNYQQ---HSHLPPQSEEMMPHSGSVYYKPSSPPTPT----TPGFQVQHSPMWDDPG 147
Query: 160 DLH------ISAEQAARQRRSSLPVQRSESNSSNDSPKLHGTRVHCMQ 201
LH ++ QR++ PV R S SP GT V Q
Sbjct: 148 SLHNFHQNYVATTHMIEQRKT--PVSRLSLFSFKQSPP--GTPVSSCQ 191
>AB019433-1|BAA77328.1| 598|Homo sapiens T-cell nuclear receptor
NOT (Nurr1) protein.
Length = 598
Score = 388 bits (956), Expect = e-107
Identities = 190/346 (54%), Positives = 242/346 (69%), Gaps = 2/346 (0%)
Query: 223 RAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXX 282
R +PS+ LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA K+CPVD
Sbjct: 254 RGSPSNEG-LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRR 312
Query: 283 XXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRL-XXXXXXXXXXXXXXXXXLITALVRAH 341
CLAVGMVKEVVRTDSLKGRRGRL LI+ALVRAH
Sbjct: 313 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPPSPPVSLISALVRAH 372
Query: 342 VDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCP 401
VD++P +LDYS+++ + D + I QFY LLT S+++I+ +AEK+PG+ DL
Sbjct: 373 VDSNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPK 432
Query: 402 EDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRSFGDWLHAVLDFSNT 461
D++ LF SA LELFVLRLAYR+ + KL FCNG+VL + QC R FG+W+ ++++FS+
Sbjct: 433 ADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVRGFGEWIDSIVEFSSN 492
Query: 462 LHSMDIDISTFACLCALTLITDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHF 521
L +M+IDIS F+C+ AL ++T+RHGLKEP RVE+LQ KI+ CL+ H+ +
Sbjct: 493 LQNMNIDISAFSCIAALAMVTERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPNYL 552
Query: 522 SRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASLPF 567
S++LG LPELR+L QGLQRIF LKLEDLVP P +I+ +F +LPF
Sbjct: 553 SKLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPAIIDKLFLDTLPF 598
Score = 33.5 bits (73), Expect = 2.0
Identities = 42/168 (25%), Positives = 63/168 (37%), Gaps = 23/168 (13%)
Query: 46 IVPEF-KSQRDTSFSETSSPIPGPALPSFEETYSVRYPKHEMAEFGIKMDEDCYNVSAYS 104
+ PEF K D + +E ++ P+ +F + YS Y + + + ++
Sbjct: 35 LTPEFVKFSMDLTNTEITATTSLPSFSTFMDNYSTGYDVKPPCLYQMPLSGQQSSIKVED 94
Query: 105 HQGHTSTQLLYQYHQPP-----IPYVPSTYYAPPQPCSPTFDTVTPNQDSYSLPPFPSTV 159
Q H Q H PP +P+ S YY P P +PT TP P +
Sbjct: 95 IQMHNYQQ---HSHLPPQSEEMMPHSGSVYYKPSSPPTPT----TPGFQVQHSPMWDDPG 147
Query: 160 DLH------ISAEQAARQRRSSLPVQRSESNSSNDSPKLHGTRVHCMQ 201
LH ++ QR++ PV R S SP GT V Q
Sbjct: 148 SLHNFHQNYVATTHMIEQRKT--PVSRLSLFSFKQSPP--GTPVSSCQ 191
>AB017586-1|BAA75666.1| 598|Homo sapiens Nurr1 protein.
Length = 598
Score = 388 bits (956), Expect = e-107
Identities = 190/346 (54%), Positives = 242/346 (69%), Gaps = 2/346 (0%)
Query: 223 RAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXX 282
R +PS+ LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA K+CPVD
Sbjct: 254 RGSPSNEG-LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRR 312
Query: 283 XXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRL-XXXXXXXXXXXXXXXXXLITALVRAH 341
CLAVGMVKEVVRTDSLKGRRGRL LI+ALVRAH
Sbjct: 313 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPPSPPVSLISALVRAH 372
Query: 342 VDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCP 401
VD++P +LDYS+++ + D + I QFY LLT S+++I+ +AEK+PG+ DL
Sbjct: 373 VDSNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPK 432
Query: 402 EDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRSFGDWLHAVLDFSNT 461
D++ LF SA LELFVLRLAYR+ + KL FCNG+VL + QC R FG+W+ ++++FS+
Sbjct: 433 ADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVRGFGEWIDSIVEFSSN 492
Query: 462 LHSMDIDISTFACLCALTLITDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHF 521
L +M+IDIS F+C+ AL ++T+RHGLKEP RVE+LQ KI+ CL+ H+ +
Sbjct: 493 LQNMNIDISAFSCIAALAMVTERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPNYL 552
Query: 522 SRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASLPF 567
S++LG LPELR+L QGLQRIF LKLEDLVP P +I+ +F +LPF
Sbjct: 553 SKLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPAIIDKLFLDTLPF 598
Score = 33.5 bits (73), Expect = 2.0
Identities = 42/168 (25%), Positives = 63/168 (37%), Gaps = 23/168 (13%)
Query: 46 IVPEF-KSQRDTSFSETSSPIPGPALPSFEETYSVRYPKHEMAEFGIKMDEDCYNVSAYS 104
+ PEF K D + +E ++ P+ +F + YS Y + + + ++
Sbjct: 35 LTPEFVKFSMDLTNTEITATTSLPSFSTFMDNYSTGYDVKPPCLYQMPLSGQQSSIKVED 94
Query: 105 HQGHTSTQLLYQYHQPP-----IPYVPSTYYAPPQPCSPTFDTVTPNQDSYSLPPFPSTV 159
Q H Q H PP +P+ S YY P P +PT TP P +
Sbjct: 95 IQMHNYQQ---HSHLPPQSEEMMPHSGSVYYKPSSPPTPT----TPGFQVQHSPMWDDPG 147
Query: 160 DLH------ISAEQAARQRRSSLPVQRSESNSSNDSPKLHGTRVHCMQ 201
LH ++ QR++ PV R S SP GT V Q
Sbjct: 148 SLHNFHQNYVATTHMIEQRKT--PVSRLSLFSFKQSPP--GTPVSSCQ 191
>AK131566-1|BAD18699.1| 652|Homo sapiens protein ( Homo sapiens
cDNA FLJ16818 fis, clone TRACH1000193, highly similar
to Orphan nuclear receptor HMR. ).
Length = 652
Score = 385 bits (948), Expect = e-106
Identities = 193/369 (52%), Positives = 245/369 (66%), Gaps = 4/369 (1%)
Query: 200 MQPSTPNSASSSPGVAPADNTGPRA-APSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFK 258
+ P++P+ S P +T R+ AP CAVCGD A+CQHYGVRTCEGCKGFFK
Sbjct: 287 LAPTSPHLEGSGILDTPVTSTKARSGAPGGSEGRCAVCGDNASCQHYGVRTCEGCKGFFK 346
Query: 259 RTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXX 318
RTVQK +KY+CLA K CPVD CLAVGMVKEVVRTDSLKGRRGRL
Sbjct: 347 RTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSK 406
Query: 319 XXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSL 378
L+T+LVRAH+D+ P A LDYS+++E D + QFY L
Sbjct: 407 PKQPPDASPAN---LLTSLVRAHLDSGPSTAKLDYSKFQELVLPHFGKEDAGDVQQFYDL 463
Query: 379 LTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLV 438
L+ S+++I+ +AEK+PG+ +L P D++ L SA LELF+LRLAYR++ + KL FC+GLV
Sbjct: 464 LSGSLEVIRKWAEKIPGFAELSPADQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLV 523
Query: 439 LDKRQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLITDRHGLKEPHRVEQLQM 498
L + QC R FGD + ++L FS +LHS+ +D+ FACL AL LITDRHGL+EP RVE+LQ
Sbjct: 524 LHRLQCARGFGDRIDSILAFSRSLHSLLVDVPAFACLSALVLITDRHGLQEPRRVEELQN 583
Query: 499 KIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIE 558
+I CL+ H+ A SR+LG LPELR+L QGLQRIF LKLEDLVP PP+I+
Sbjct: 584 RIASCLKEHVAAVAGEPQPASCLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIID 643
Query: 559 NMFRASLPF 567
+F +LPF
Sbjct: 644 KIFMDTLPF 652
>S77154-1|AAB33999.1| 535|Homo sapiens TINUR protein.
Length = 535
Score = 383 bits (942), Expect = e-105
Identities = 189/346 (54%), Positives = 240/346 (69%), Gaps = 2/346 (0%)
Query: 223 RAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXX 282
R +PS+ LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA K+CPVD
Sbjct: 191 RGSPSNEG-LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRR 249
Query: 283 XXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRL-XXXXXXXXXXXXXXXXXLITALVRAH 341
CLAVGMVKEVVRTDSLKGRRGRL LI+ALVRAH
Sbjct: 250 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPPSPPVSLISALVRAH 309
Query: 342 VDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCP 401
VD++P +LDYS+++ + D + I QFY LLT S+++I+ +AEK+PG+ DL
Sbjct: 310 VDSNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPK 369
Query: 402 EDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRSFGDWLHAVLDFSNT 461
D++ LF SA LELFVLRLAYR+ + KL F NG VL + QC R FG+W+ ++++FS+
Sbjct: 370 ADQDLLFESAFLELFVLRLAYRSNPVEGKLIFWNGWVLHRLQCVRGFGEWIDSIVEFSSN 429
Query: 462 LHSMDIDISTFACLCALTLITDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHF 521
L +M+IDIS F+C+ AL ++T+RHGLKEP RVE+LQ KI+ CL+ H+ +
Sbjct: 430 LQNMNIDISAFSCIAALAMVTERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPNYL 489
Query: 522 SRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASLPF 567
S++LG LPELR+L QGLQRIF LKLEDLVP P +I+ +F +LPF
Sbjct: 490 SKLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPAIIDKLFLDTLPF 535
>U12767-1|AAB02581.1| 587|Homo sapiens mitogen induced nuclear
orphan receptor protein.
Length = 587
Score = 351 bits (862), Expect = 5e-96
Identities = 191/371 (51%), Positives = 237/371 (63%), Gaps = 13/371 (3%)
Query: 204 TPN-SASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQ 262
TP+ +ASS G +P+ + P + SS CAVCGD AACQHYGVRTCEGCKGFFKRTVQ
Sbjct: 223 TPSPTASSLLGESPSLPSPPSRSSSSGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQ 282
Query: 263 KGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXX 322
K +KYVCLA K+CPVD CL+VGMVKEVVRTDSLKGRRGRL
Sbjct: 283 KNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSP 342
Query: 323 XXXXXXXXXX------LITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFY 376
++ ALVRA D++P +LDYS+Y P+ +D E + QFY
Sbjct: 343 LQQEPSQPSPPSPPICMMNALVRALTDSTP--RDLDYSRYC-PTDQAAAGTDAEHVQQFY 399
Query: 377 SLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNG 436
+LLT SID+ + +AEK+PG+ DL ED+ L SA LELFVLRL+ R+ + K FCNG
Sbjct: 400 NLLTASIDVSRSWAEKIPGFTDLPKEDQTLLIESAFLELFVLRLSIRSNTAEDKFVFCNG 459
Query: 437 LVLDKRQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLITDRHGLKEPHRVEQL 496
LVL + QC R FG+WL ++ DFS L S+++DI ACL AL++IT+RHGLKEP RVE+L
Sbjct: 460 LVLHRLQCLRGFGEWLDSIKDFSLNLQSLNLDIQALACLSALSMITERHGLKEPKRVEEL 519
Query: 497 QMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPL 556
KI L+ H P S+VLGAL ELR + GLQRIF LKLEDLV P +
Sbjct: 520 CNKITSSLKDHQ---SKGQALEPTESKVLGALVELRKICTLGLQRIFYLKLEDLVSPPSI 576
Query: 557 IENMFRASLPF 567
I+ +F +LPF
Sbjct: 577 IDKLFLDTLPF 587
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 351 bits (862), Expect = 5e-96
Identities = 191/371 (51%), Positives = 237/371 (63%), Gaps = 13/371 (3%)
Query: 204 TPN-SASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQ 262
TP+ +ASS G +P+ + P + SS CAVCGD AACQHYGVRTCEGCKGFFKRTVQ
Sbjct: 320 TPSPTASSLLGESPSLPSPPSRSSSSGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQ 379
Query: 263 KGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXX 322
K +KYVCLA K+CPVD CL+VGMVKEVVRTDSLKGRRGRL
Sbjct: 380 KNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSP 439
Query: 323 XXXXXXXXXX------LITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFY 376
++ ALVRA D++P +LDYS+Y P+ +D E + QFY
Sbjct: 440 LQQEPSQPSPPSPPICMMNALVRALTDSTP--RDLDYSRYC-PTDQAAAGTDAEHVQQFY 496
Query: 377 SLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNG 436
+LLT SID+ + +AEK+PG+ DL ED+ L SA LELFVLRL+ R+ + K FCNG
Sbjct: 497 NLLTASIDVSRSWAEKIPGFTDLPKEDQTLLIESAFLELFVLRLSIRSNTAEDKFVFCNG 556
Query: 437 LVLDKRQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLITDRHGLKEPHRVEQL 496
LVL + QC R FG+WL ++ DFS L S+++DI ACL AL++IT+RHGLKEP RVE+L
Sbjct: 557 LVLHRLQCLRGFGEWLDSIKDFSLNLQSLNLDIQALACLSALSMITERHGLKEPKRVEEL 616
Query: 497 QMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPL 556
KI L+ H P S+VLGAL ELR + GLQRIF LKLEDLV P +
Sbjct: 617 CNKITSSLKDHQ---SKGQALEPTESKVLGALVELRKICTLGLQRIFYLKLEDLVSPPSI 673
Query: 557 IENMFRASLPF 567
I+ +F +LPF
Sbjct: 674 IDKLFLDTLPF 684
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 351 bits (862), Expect = 5e-96
Identities = 191/371 (51%), Positives = 237/371 (63%), Gaps = 13/371 (3%)
Query: 204 TPN-SASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQ 262
TP+ +ASS G +P+ + P + SS CAVCGD AACQHYGVRTCEGCKGFFKRTVQ
Sbjct: 262 TPSPTASSLLGESPSLPSPPSRSSSSGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQ 321
Query: 263 KGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXX 322
K +KYVCLA K+CPVD CL+VGMVKEVVRTDSLKGRRGRL
Sbjct: 322 KNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSP 381
Query: 323 XXXXXXXXXX------LITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFY 376
++ ALVRA D++P +LDYS+Y P+ +D E + QFY
Sbjct: 382 LQQEPSQPSPPSPPICMMNALVRALTDSTP--RDLDYSRYC-PTDQAAAGTDAEHVQQFY 438
Query: 377 SLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNG 436
+LLT SID+ + +AEK+PG+ DL ED+ L SA LELFVLRL+ R+ + K FCNG
Sbjct: 439 NLLTASIDVSRSWAEKIPGFTDLPKEDQTLLIESAFLELFVLRLSIRSNTAEDKFVFCNG 498
Query: 437 LVLDKRQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLITDRHGLKEPHRVEQL 496
LVL + QC R FG+WL ++ DFS L S+++DI ACL AL++IT+RHGLKEP RVE+L
Sbjct: 499 LVLHRLQCLRGFGEWLDSIKDFSLNLQSLNLDIQALACLSALSMITERHGLKEPKRVEEL 558
Query: 497 QMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPL 556
KI L+ H P S+VLGAL ELR + GLQRIF LKLEDLV P +
Sbjct: 559 CNKITSSLKDHQ---SKGQALEPTESKVLGALVELRKICTLGLQRIFYLKLEDLVSPPSI 615
Query: 557 IENMFRASLPF 567
I+ +F +LPF
Sbjct: 616 IDKLFLDTLPF 626
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 351 bits (862), Expect = 5e-96
Identities = 191/371 (51%), Positives = 237/371 (63%), Gaps = 13/371 (3%)
Query: 204 TPN-SASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQ 262
TP+ +ASS G +P+ + P + SS CAVCGD AACQHYGVRTCEGCKGFFKRTVQ
Sbjct: 273 TPSPTASSLLGESPSLPSPPSRSSSSGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQ 332
Query: 263 KGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXX 322
K +KYVCLA K+CPVD CL+VGMVKEVVRTDSLKGRRGRL
Sbjct: 333 KNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSP 392
Query: 323 XXXXXXXXXX------LITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFY 376
++ ALVRA D++P +LDYS+Y P+ +D E + QFY
Sbjct: 393 LQQEPSQPSPPSPPICMMNALVRALTDSTP--RDLDYSRYC-PTDQAAAGTDAEHVQQFY 449
Query: 377 SLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNG 436
+LLT SID+ + +AEK+PG+ DL ED+ L SA LELFVLRL+ R+ + K FCNG
Sbjct: 450 NLLTASIDVSRSWAEKIPGFTDLPKEDQTLLIESAFLELFVLRLSIRSNTAEDKFVFCNG 509
Query: 437 LVLDKRQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLITDRHGLKEPHRVEQL 496
LVL + QC R FG+WL ++ DFS L S+++DI ACL AL++IT+RHGLKEP RVE+L
Sbjct: 510 LVLHRLQCLRGFGEWLDSIKDFSLNLQSLNLDIQALACLSALSMITERHGLKEPKRVEEL 569
Query: 497 QMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPL 556
KI L+ H P S+VLGAL ELR + GLQRIF LKLEDLV P +
Sbjct: 570 CNKITSSLKDHQ---SKGQALEPTESKVLGALVELRKICTLGLQRIFYLKLEDLVSPPSI 626
Query: 557 IENMFRASLPF 567
I+ +F +LPF
Sbjct: 627 IDKLFLDTLPF 637
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 351 bits (862), Expect = 5e-96
Identities = 191/371 (51%), Positives = 237/371 (63%), Gaps = 13/371 (3%)
Query: 204 TPN-SASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQ 262
TP+ +ASS G +P+ + P + SS CAVCGD AACQHYGVRTCEGCKGFFKRTVQ
Sbjct: 262 TPSPTASSLLGESPSLPSPPSRSSSSGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQ 321
Query: 263 KGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXX 322
K +KYVCLA K+CPVD CL+VGMVKEVVRTDSLKGRRGRL
Sbjct: 322 KNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSP 381
Query: 323 XXXXXXXXXX------LITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFY 376
++ ALVRA D++P +LDYS+Y P+ +D E + QFY
Sbjct: 382 LQQEPSQPSPPSPPICMMNALVRALTDSTP--RDLDYSRYC-PTDQAAAGTDAEHVQQFY 438
Query: 377 SLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNG 436
+LLT SID+ + +AEK+PG+ DL ED+ L SA LELFVLRL+ R+ + K FCNG
Sbjct: 439 NLLTASIDVSRSWAEKIPGFTDLPKEDQTLLIESAFLELFVLRLSIRSNTAEDKFVFCNG 498
Query: 437 LVLDKRQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLITDRHGLKEPHRVEQL 496
LVL + QC R FG+WL ++ DFS L S+++DI ACL AL++IT+RHGLKEP RVE+L
Sbjct: 499 LVLHRLQCLRGFGEWLDSIKDFSLNLQSLNLDIQALACLSALSMITERHGLKEPKRVEEL 558
Query: 497 QMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPL 556
KI L+ H P S+VLGAL ELR + GLQRIF LKLEDLV P +
Sbjct: 559 CNKITSSLKDHQ---SKGQALEPTESKVLGALVELRKICTLGLQRIFYLKLEDLVSPPSI 615
Query: 557 IENMFRASLPF 567
I+ +F +LPF
Sbjct: 616 IDKLFLDTLPF 626
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 351 bits (862), Expect = 5e-96
Identities = 191/371 (51%), Positives = 237/371 (63%), Gaps = 13/371 (3%)
Query: 204 TPN-SASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQ 262
TP+ +ASS G +P+ + P + SS CAVCGD AACQHYGVRTCEGCKGFFKRTVQ
Sbjct: 273 TPSPTASSLLGESPSLPSPPSRSSSSGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQ 332
Query: 263 KGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXX 322
K +KYVCLA K+CPVD CL+VGMVKEVVRTDSLKGRRGRL
Sbjct: 333 KNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSP 392
Query: 323 XXXXXXXXXX------LITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFY 376
++ ALVRA D++P +LDYS+Y P+ +D E + QFY
Sbjct: 393 LQQEPSQPSPPSPPICMMNALVRALTDSTP--RDLDYSRYC-PTDQAAAGTDAEHVQQFY 449
Query: 377 SLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNG 436
+LLT SID+ + +AEK+PG+ DL ED+ L SA LELFVLRL+ R+ + K FCNG
Sbjct: 450 NLLTASIDVSRSWAEKIPGFTDLPKEDQTLLIESAFLELFVLRLSIRSNTAEDKFVFCNG 509
Query: 437 LVLDKRQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLITDRHGLKEPHRVEQL 496
LVL + QC R FG+WL ++ DFS L S+++DI ACL AL++IT+RHGLKEP RVE+L
Sbjct: 510 LVLHRLQCLRGFGEWLDSIKDFSLNLQSLNLDIQALACLSALSMITERHGLKEPKRVEEL 569
Query: 497 QMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPL 556
KI L+ H P S+VLGAL ELR + GLQRIF LKLEDLV P +
Sbjct: 570 CNKITSSLKDHQ---SKGQALEPTESKVLGALVELRKICTLGLQRIFYLKLEDLVSPPSI 626
Query: 557 IENMFRASLPF 567
I+ +F +LPF
Sbjct: 627 IDKLFLDTLPF 637
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 347 bits (853), Expect = 6e-95
Identities = 189/371 (50%), Positives = 237/371 (63%), Gaps = 13/371 (3%)
Query: 204 TPN-SASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQ 262
TP+ +ASS G +P+ + P + SS CAVCGD AACQHYGVRTCEGCKGFFKRTVQ
Sbjct: 262 TPSPTASSLLGESPSLPSPPSRSSSSGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQ 321
Query: 263 KGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXX 322
K +KYVCLA K+CPVD CL+VGMVKEVVRTDSLKGRRGRL
Sbjct: 322 KNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSP 381
Query: 323 XXXXXXXXXX------LITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFY 376
++ ALVRA D++P +LDYS+Y P+ +D E + QFY
Sbjct: 382 LQQEPSQPSPPSPPICMMNALVRALTDSTP--RDLDYSRYC-PTDQAAAGTDAEHVQQFY 438
Query: 377 SLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNG 436
+LLT SID+ + +AE++PG+ DL ED+ L SA LELFVLRL+ R+ + K FCNG
Sbjct: 439 NLLTASIDVSRSWAERIPGFTDLPKEDQTLLIESAFLELFVLRLSIRSNTAEDKFVFCNG 498
Query: 437 LVLDKRQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLITDRHGLKEPHRVEQL 496
LVL + QC R FG+WL ++ DFS L S+++DI ACL AL++IT+RHGLKEP RVE+L
Sbjct: 499 LVLHRLQCLRGFGEWLDSIKDFSLNLQSLNLDIQALACLSALSMITERHGLKEPKRVEEL 558
Query: 497 QMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPL 556
KI L+ H P+ S+VL AL ELR + GLQRIF LKLEDLV P +
Sbjct: 559 CNKITSSLKDHQ---SKGQALEPNESKVLVALVELRKICTLGLQRIFYLKLEDLVSPPSI 615
Query: 557 IENMFRASLPF 567
I+ +F +LPF
Sbjct: 616 IDKLFLDTLPF 626
>M57707-1|AAA63254.1| 454|Homo sapiens retinoic acid receptor-gamma
protein.
Length = 454
Score = 168 bits (409), Expect = 4e-41
Identities = 113/362 (31%), Positives = 177/362 (48%), Gaps = 12/362 (3%)
Query: 203 STPNSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQ 262
S ++SS + P+ + P P + C VC D ++ HYGV +CEGCKGFF+R++Q
Sbjct: 62 SVETQSTSSEEMVPSSPSPP--PPPRVYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQ 119
Query: 263 KGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXX 322
K Y C +K+C ++ C VGM KE VR D K ++ +
Sbjct: 120 KNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNK-KKKEVKEEGSPD 178
Query: 323 XXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMS-DLEVIHQFYSLLTT 381
LIT + +AH +T P L +Y S + + DL + +F L T
Sbjct: 179 SYELSPQLEELITKVSKAHQETFPSLCQL--GKYTTNSSADHRVQLDLGLWDKFSELATK 236
Query: 382 SIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDK 441
I I FA+++PG+ L D+ L +A L++ +LR+ R E +TF +GL L++
Sbjct: 237 CIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNR 296
Query: 442 RQCQRS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMK 499
Q + FG V F+ L +++D + L A+ LI DR L+EP +V++LQ
Sbjct: 297 TQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEP 356
Query: 500 IIGCLRAHMPXXXXXXXXAPH-FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIE 558
++ LR + P+ F R+L + +LR +S +G +R +LK+E P PPLI
Sbjct: 357 LLEALRLY---ARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIR 413
Query: 559 NM 560
M
Sbjct: 414 EM 415
>M38258-1|AAA60254.1| 454|Homo sapiens retinoic acid
receptor-gamma-1 protein.
Length = 454
Score = 168 bits (409), Expect = 4e-41
Identities = 113/362 (31%), Positives = 177/362 (48%), Gaps = 12/362 (3%)
Query: 203 STPNSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQ 262
S ++SS + P+ + P P + C VC D ++ HYGV +CEGCKGFF+R++Q
Sbjct: 62 SVETQSTSSEEMVPSSPSPP--PPPRVYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQ 119
Query: 263 KGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXX 322
K Y C +K+C ++ C VGM KE VR D K ++ +
Sbjct: 120 KNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNK-KKKEVKEEGSPD 178
Query: 323 XXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMS-DLEVIHQFYSLLTT 381
LIT + +AH +T P L +Y S + + DL + +F L T
Sbjct: 179 SYELSPQLEELITKVSKAHQETFPSLCQL--GKYTTNSSADHRVQLDLGLWDKFSELATK 236
Query: 382 SIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDK 441
I I FA+++PG+ L D+ L +A L++ +LR+ R E +TF +GL L++
Sbjct: 237 CIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNR 296
Query: 442 RQCQRS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMK 499
Q + FG V F+ L +++D + L A+ LI DR L+EP +V++LQ
Sbjct: 297 TQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEP 356
Query: 500 IIGCLRAHMPXXXXXXXXAPH-FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIE 558
++ LR + P+ F R+L + +LR +S +G +R +LK+E P PPLI
Sbjct: 357 LLEALRLY---ARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIR 413
Query: 559 NM 560
M
Sbjct: 414 EM 415
>M24857-1|AAA52692.1| 454|Homo sapiens RARG protein.
Length = 454
Score = 168 bits (409), Expect = 4e-41
Identities = 113/362 (31%), Positives = 177/362 (48%), Gaps = 12/362 (3%)
Query: 203 STPNSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQ 262
S ++SS + P+ + P P + C VC D ++ HYGV +CEGCKGFF+R++Q
Sbjct: 62 SVETQSTSSEEMVPSSPSPP--PPPRVYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQ 119
Query: 263 KGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXX 322
K Y C +K+C ++ C VGM KE VR D K ++ +
Sbjct: 120 KNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNK-KKKEVKEEGSPD 178
Query: 323 XXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMS-DLEVIHQFYSLLTT 381
LIT + +AH +T P L +Y S + + DL + +F L T
Sbjct: 179 SYELSPQLEELITKVSKAHQETFPSLCQL--GKYTTNSSADHRVQLDLGLWDKFSELATK 236
Query: 382 SIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDK 441
I I FA+++PG+ L D+ L +A L++ +LR+ R E +TF +GL L++
Sbjct: 237 CIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNR 296
Query: 442 RQCQRS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMK 499
Q + FG V F+ L +++D + L A+ LI DR L+EP +V++LQ
Sbjct: 297 TQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEP 356
Query: 500 IIGCLRAHMPXXXXXXXXAPH-FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIE 558
++ LR + P+ F R+L + +LR +S +G +R +LK+E P PPLI
Sbjct: 357 LLEALRLY---ARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIR 413
Query: 559 NM 560
M
Sbjct: 414 EM 415
>BC093729-1|AAH93729.1| 454|Homo sapiens retinoic acid receptor,
gamma protein.
Length = 454
Score = 168 bits (409), Expect = 4e-41
Identities = 113/362 (31%), Positives = 177/362 (48%), Gaps = 12/362 (3%)
Query: 203 STPNSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQ 262
S ++SS + P+ + P P + C VC D ++ HYGV +CEGCKGFF+R++Q
Sbjct: 62 SVETQSTSSEEMVPSSPSPP--PPPRVYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQ 119
Query: 263 KGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXX 322
K Y C +K+C ++ C VGM KE VR D K ++ +
Sbjct: 120 KNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNK-KKKEVKEEGSPD 178
Query: 323 XXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMS-DLEVIHQFYSLLTT 381
LIT + +AH +T P L +Y S + + DL + +F L T
Sbjct: 179 SYELSPQLEELITKVSKAHQETFPSLCQL--GKYTTNSSADHRVQLDLGLWDKFSELATK 236
Query: 382 SIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDK 441
I I FA+++PG+ L D+ L +A L++ +LR+ R E +TF +GL L++
Sbjct: 237 CIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNR 296
Query: 442 RQCQRS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMK 499
Q + FG V F+ L +++D + L A+ LI DR L+EP +V++LQ
Sbjct: 297 TQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEP 356
Query: 500 IIGCLRAHMPXXXXXXXXAPH-FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIE 558
++ LR + P+ F R+L + +LR +S +G +R +LK+E P PPLI
Sbjct: 357 LLEALRLY---ARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIR 413
Query: 559 NM 560
M
Sbjct: 414 EM 415
>BC093727-1|AAH93727.1| 454|Homo sapiens retinoic acid receptor,
gamma protein.
Length = 454
Score = 168 bits (409), Expect = 4e-41
Identities = 113/362 (31%), Positives = 177/362 (48%), Gaps = 12/362 (3%)
Query: 203 STPNSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQ 262
S ++SS + P+ + P P + C VC D ++ HYGV +CEGCKGFF+R++Q
Sbjct: 62 SVETQSTSSEEMVPSSPSPP--PPPRVYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQ 119
Query: 263 KGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXX 322
K Y C +K+C ++ C VGM KE VR D K ++ +
Sbjct: 120 KNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNK-KKKEVKEEGSPD 178
Query: 323 XXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMS-DLEVIHQFYSLLTT 381
LIT + +AH +T P L +Y S + + DL + +F L T
Sbjct: 179 SYELSPQLEELITKVSKAHQETFPSLCQL--GKYTTNSSADHRVQLDLGLWDKFSELATK 236
Query: 382 SIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDK 441
I I FA+++PG+ L D+ L +A L++ +LR+ R E +TF +GL L++
Sbjct: 237 CIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNR 296
Query: 442 RQCQRS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMK 499
Q + FG V F+ L +++D + L A+ LI DR L+EP +V++LQ
Sbjct: 297 TQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEP 356
Query: 500 IIGCLRAHMPXXXXXXXXAPH-FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIE 558
++ LR + P+ F R+L + +LR +S +G +R +LK+E P PPLI
Sbjct: 357 LLEALRLY---ARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIR 413
Query: 559 NM 560
M
Sbjct: 414 EM 415
>X06614-1|CAA29829.1| 462|Homo sapiens protein ( Human mRNA for
receptor of retinoic acid. ).
Length = 462
Score = 167 bits (405), Expect = 1e-40
Identities = 115/372 (30%), Positives = 183/372 (49%), Gaps = 18/372 (4%)
Query: 203 STPNSASSSPGVAPADNTGPRAAPSSPSQL------CAVCGDTAACQHYGVRTCEGCKGF 256
STP+ A+ + ++ P +P SP L C VC D ++ HYGV CEGCKGF
Sbjct: 54 STPSPATIETQSSSSEEIVP--SPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGF 111
Query: 257 FKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLX 316
F+R++QK Y C +K+C ++ C VGM KE VR D K ++ +
Sbjct: 112 FRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKEVP 170
Query: 317 XXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMS-DLEVIHQF 375
LI + +AH +T P L +Y + E +S D+++ +F
Sbjct: 171 KPECSESYTLTPEVGELIEKVRKAHQETFPALCQL--GKYTTNNSSEQRVSLDIDLWDKF 228
Query: 376 YSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCN 435
L T I FA+++PG+ L D+ L +A L++ +LR+ R E +TF +
Sbjct: 229 SELSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSD 288
Query: 436 GLVLDKRQCQRS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRV 493
GL L++ Q + FG V F+N L +++D + L A+ LI DR L++P RV
Sbjct: 289 GLTLNRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRV 348
Query: 494 EQLQMKIIGCLRAHMPXXXXXXXXAPH-FSRVLGALPELRSLSVQGLQRIFSLKLEDLVP 552
+ LQ ++ L+ ++ PH F ++L + +LRS+S +G +R+ +LK+E
Sbjct: 349 DMLQEPLLEALKVYV---RKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGS 405
Query: 553 APPLIENMFRAS 564
PPLI+ M S
Sbjct: 406 MPPLIQEMLENS 417
>X06538-1|CAA29787.1| 432|Homo sapiens protein ( Human mRNA for
retinoic acid receptor. ).
Length = 432
Score = 167 bits (405), Expect = 1e-40
Identities = 115/372 (30%), Positives = 183/372 (49%), Gaps = 18/372 (4%)
Query: 203 STPNSASSSPGVAPADNTGPRAAPSSPSQL------CAVCGDTAACQHYGVRTCEGCKGF 256
STP+ A+ + ++ P +P SP L C VC D ++ HYGV CEGCKGF
Sbjct: 24 STPSPATIETQSSSSEEIVP--SPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGF 81
Query: 257 FKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLX 316
F+R++QK Y C +K+C ++ C VGM KE VR D K ++ +
Sbjct: 82 FRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKEVP 140
Query: 317 XXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMS-DLEVIHQF 375
LI + +AH +T P L +Y + E +S D+++ +F
Sbjct: 141 KPECSESYTLTPEVGELIEKVRKAHQETFPALCQL--GKYTTNNSSEQRVSLDIDLWDKF 198
Query: 376 YSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCN 435
L T I FA+++PG+ L D+ L +A L++ +LR+ R E +TF +
Sbjct: 199 SELSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSD 258
Query: 436 GLVLDKRQCQRS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRV 493
GL L++ Q + FG V F+N L +++D + L A+ LI DR L++P RV
Sbjct: 259 GLTLNRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRV 318
Query: 494 EQLQMKIIGCLRAHMPXXXXXXXXAPH-FSRVLGALPELRSLSVQGLQRIFSLKLEDLVP 552
+ LQ ++ L+ ++ PH F ++L + +LRS+S +G +R+ +LK+E
Sbjct: 319 DMLQEPLLEALKVYV---RKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGS 375
Query: 553 APPLIENMFRAS 564
PPLI+ M S
Sbjct: 376 MPPLIQEMLENS 387
>CR457438-1|CAG33719.1| 462|Homo sapiens RARA protein.
Length = 462
Score = 167 bits (405), Expect = 1e-40
Identities = 115/372 (30%), Positives = 183/372 (49%), Gaps = 18/372 (4%)
Query: 203 STPNSASSSPGVAPADNTGPRAAPSSPSQL------CAVCGDTAACQHYGVRTCEGCKGF 256
STP+ A+ + ++ P +P SP L C VC D ++ HYGV CEGCKGF
Sbjct: 54 STPSPATIETQSSSSEEIVP--SPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGF 111
Query: 257 FKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLX 316
F+R++QK Y C +K+C ++ C VGM KE VR D K ++ +
Sbjct: 112 FRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKEVP 170
Query: 317 XXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMS-DLEVIHQF 375
LI + +AH +T P L +Y + E +S D+++ +F
Sbjct: 171 KPECSESYTLTPEVGELIEKVRKAHQETFPALCQL--GKYTTNNSSEQRVSLDIDLWDKF 228
Query: 376 YSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCN 435
L T I FA+++PG+ L D+ L +A L++ +LR+ R E +TF +
Sbjct: 229 SELSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSD 288
Query: 436 GLVLDKRQCQRS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRV 493
GL L++ Q + FG V F+N L +++D + L A+ LI DR L++P RV
Sbjct: 289 GLTLNRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRV 348
Query: 494 EQLQMKIIGCLRAHMPXXXXXXXXAPH-FSRVLGALPELRSLSVQGLQRIFSLKLEDLVP 552
+ LQ ++ L+ ++ PH F ++L + +LRS+S +G +R+ +LK+E
Sbjct: 349 DMLQEPLLEALKVYV---RKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGS 405
Query: 553 APPLIENMFRAS 564
PPLI+ M S
Sbjct: 406 MPPLIQEMLENS 417
>BC071733-1|AAH71733.1| 457|Homo sapiens retinoic acid receptor,
alpha protein.
Length = 457
Score = 167 bits (405), Expect = 1e-40
Identities = 114/368 (30%), Positives = 181/368 (49%), Gaps = 16/368 (4%)
Query: 203 STPNSASSSPGVAPADNTGPRAAPSSPS--QLCAVCGDTAACQHYGVRTCEGCKGFFKRT 260
S +SSS + P+ P + P P + C VC D ++ HYGV CEGCKGFF+R+
Sbjct: 55 SIETQSSSSEEIVPS----PPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRS 110
Query: 261 VQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXX 320
+QK Y C +K+C ++ C VGM KE VR D K ++ +
Sbjct: 111 IQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKEVPKPEC 169
Query: 321 XXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMS-DLEVIHQFYSLL 379
LI + +AH +T P L +Y + E +S D+++ +F L
Sbjct: 170 SESYTLTPEVGELIEKVRKAHQETFPALCQL--GKYTTNNSSEQRVSLDIDLWDKFSELS 227
Query: 380 TTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVL 439
T I FA+++PG+ L D+ L +A L++ +LR+ R E +TF +GL L
Sbjct: 228 TKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTL 287
Query: 440 DKRQCQRS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQ 497
++ Q + FG V F+N L +++D + L A+ LI DR L++P RV+ LQ
Sbjct: 288 NRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQ 347
Query: 498 MKIIGCLRAHMPXXXXXXXXAPH-FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPL 556
++ L+ ++ PH F ++L + +LRS+S +G +R+ +LK+E PPL
Sbjct: 348 EPLLEALKVYV---RKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPL 404
Query: 557 IENMFRAS 564
I+ M S
Sbjct: 405 IQEMLENS 412
>BC008727-1|AAH08727.1| 462|Homo sapiens retinoic acid receptor,
alpha protein.
Length = 462
Score = 167 bits (405), Expect = 1e-40
Identities = 115/372 (30%), Positives = 183/372 (49%), Gaps = 18/372 (4%)
Query: 203 STPNSASSSPGVAPADNTGPRAAPSSPSQL------CAVCGDTAACQHYGVRTCEGCKGF 256
STP+ A+ + ++ P +P SP L C VC D ++ HYGV CEGCKGF
Sbjct: 54 STPSPATIETQSSSSEEIVP--SPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGF 111
Query: 257 FKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLX 316
F+R++QK Y C +K+C ++ C VGM KE VR D K ++ +
Sbjct: 112 FRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKEVP 170
Query: 317 XXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMS-DLEVIHQF 375
LI + +AH +T P L +Y + E +S D+++ +F
Sbjct: 171 KPECSESYTLTPEVGELIEKVRKAHQETFPALCQL--GKYTTNNSSEQRVSLDIDLWDKF 228
Query: 376 YSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCN 435
L T I FA+++PG+ L D+ L +A L++ +LR+ R E +TF +
Sbjct: 229 SELSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSD 288
Query: 436 GLVLDKRQCQRS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRV 493
GL L++ Q + FG V F+N L +++D + L A+ LI DR L++P RV
Sbjct: 289 GLTLNRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRV 348
Query: 494 EQLQMKIIGCLRAHMPXXXXXXXXAPH-FSRVLGALPELRSLSVQGLQRIFSLKLEDLVP 552
+ LQ ++ L+ ++ PH F ++L + +LRS+S +G +R+ +LK+E
Sbjct: 349 DMLQEPLLEALKVYV---RKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGS 405
Query: 553 APPLIENMFRAS 564
PPLI+ M S
Sbjct: 406 MPPLIQEMLENS 417
>X07282-1|CAA30262.1| 448|Homo sapiens protein ( Human mRNA for
retinoic acid receptor-epsilon protein. ).
Length = 448
Score = 166 bits (404), Expect = 2e-40
Identities = 106/336 (31%), Positives = 166/336 (49%), Gaps = 10/336 (2%)
Query: 233 CAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXX 292
C VC D ++ HYGV CEGCKGFF+R++QK Y C +K+C ++
Sbjct: 81 CFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNCVINKVTRNRCQYCRLQK 140
Query: 293 CLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLD 352
C VGM KE VR D K ++ L + +AH +T P L
Sbjct: 141 CFEVGMSKESVRNDRNK-KKKETSKQECTESYEMTAELDDLTEKIRKAHQETFPSLCQL- 198
Query: 353 YSQYREPSPLEPPMS-DLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASA 411
+Y S + + DL + +F L T I I FA+++PG+ L D+ L +A
Sbjct: 199 -GKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAA 257
Query: 412 RLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRS-FGDWLHAVLDFSNTLHSMDIDIS 470
L++ +LR+ R E +TF +GL L++ Q + FG V F+N L +++D +
Sbjct: 258 CLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLQPLEMDDT 317
Query: 471 TFACLCALTLIT-DRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPH-FSRVLGAL 528
L A+ LI DR L+EP +V++LQ ++ L+ ++ PH F ++L +
Sbjct: 318 ETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYI---RKRRPSKPHMFPKILMKI 374
Query: 529 PELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRAS 564
+LRS+S +G +R+ +LK+E PPLI+ M S
Sbjct: 375 TDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENS 410
>AF088895-1|AAD05222.1| 462|Homo sapiens retinoic acid receptor
alpha protein.
Length = 462
Score = 166 bits (404), Expect = 2e-40
Identities = 115/372 (30%), Positives = 183/372 (49%), Gaps = 18/372 (4%)
Query: 203 STPNSASSSPGVAPADNTGPRAAPSSPSQL------CAVCGDTAACQHYGVRTCEGCKGF 256
STP+ A+ + ++ P +P SP L C VC D ++ HYGV CEGCKGF
Sbjct: 54 STPSPATIETQSSSSEEIVP--SPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGF 111
Query: 257 FKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLX 316
F+R++QK Y C +K+C ++ C VGM KE VR D K ++ +
Sbjct: 112 FRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKEVP 170
Query: 317 XXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMS-DLEVIHQF 375
LI + +AH +T P L +Y + E +S D+++ +F
Sbjct: 171 KPECSESYTLTPEVGELIEKVRKAHQETFPALCQL--GKYTTNNSSEQRVSLDIDLWDKF 228
Query: 376 YSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCN 435
L T I FA+++PG+ L D+ L +A L++ +LR+ R E +TF +
Sbjct: 229 SELSTKCIIKTVDFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSD 288
Query: 436 GLVLDKRQCQRS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRV 493
GL L++ Q + FG V F+N L +++D + L A+ LI DR L++P RV
Sbjct: 289 GLTLNRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRV 348
Query: 494 EQLQMKIIGCLRAHMPXXXXXXXXAPH-FSRVLGALPELRSLSVQGLQRIFSLKLEDLVP 552
+ LQ ++ L+ ++ PH F ++L + +LRS+S +G +R+ +LK+E
Sbjct: 349 DMLQEPLLEALKVYV---RKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGS 405
Query: 553 APPLIENMFRAS 564
PPLI+ M S
Sbjct: 406 MPPLIQEMLENS 417
>U41743-1|AAB00113.1| 520|Homo sapiens nucleophosmin-retinoic acid
receptor alpha fusion protein NPM-RAR short form
protein.
Length = 520
Score = 166 bits (403), Expect = 2e-40
Identities = 113/363 (31%), Positives = 180/363 (49%), Gaps = 16/363 (4%)
Query: 208 ASSSPGVAPADNTGPRAAPSSPS--QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS 265
+SSS + P+ P + P P + C VC D ++ HYGV CEGCKGFF+R++QK
Sbjct: 123 SSSSEEIVPS----PPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM 178
Query: 266 KYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXX 325
Y C +K+C ++ C VGM KE VR D K ++ +
Sbjct: 179 VYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKEVPKPECSESYT 237
Query: 326 XXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMS-DLEVIHQFYSLLTTSID 384
LI + +AH +T P L +Y + E +S D+++ +F L T I
Sbjct: 238 LTPEVGELIEKVRKAHQETFPALCQL--GKYTTNNSSEQRVSLDIDLWDKFSELSTKCII 295
Query: 385 MIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQC 444
FA+++PG+ L D+ L +A L++ +LR+ R E +TF +GL L++ Q
Sbjct: 296 KTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQM 355
Query: 445 QRS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMKIIG 502
+ FG V F+N L +++D + L A+ LI DR L++P RV+ LQ ++
Sbjct: 356 HNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLE 415
Query: 503 CLRAHMPXXXXXXXXAPH-FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMF 561
L+ ++ PH F ++L + +LRS+S +G +R+ +LK+E PPLI+ M
Sbjct: 416 ALKVYV---RKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEML 472
Query: 562 RAS 564
S
Sbjct: 473 ENS 475
>U41742-1|AAB00112.1| 563|Homo sapiens nucleophosmin-retinoic acid
receptor alpha fusion protein NPM-RAR long form protein.
Length = 563
Score = 166 bits (403), Expect = 2e-40
Identities = 113/363 (31%), Positives = 180/363 (49%), Gaps = 16/363 (4%)
Query: 208 ASSSPGVAPADNTGPRAAPSSPS--QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS 265
+SSS + P+ P + P P + C VC D ++ HYGV CEGCKGFF+R++QK
Sbjct: 166 SSSSEEIVPS----PPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM 221
Query: 266 KYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXX 325
Y C +K+C ++ C VGM KE VR D K ++ +
Sbjct: 222 VYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKEVPKPECSESYT 280
Query: 326 XXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMS-DLEVIHQFYSLLTTSID 384
LI + +AH +T P L +Y + E +S D+++ +F L T I
Sbjct: 281 LTPEVGELIEKVRKAHQETFPALCQL--GKYTTNNSSEQRVSLDIDLWDKFSELSTKCII 338
Query: 385 MIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQC 444
FA+++PG+ L D+ L +A L++ +LR+ R E +TF +GL L++ Q
Sbjct: 339 KTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQM 398
Query: 445 QRS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMKIIG 502
+ FG V F+N L +++D + L A+ LI DR L++P RV+ LQ ++
Sbjct: 399 HNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLE 458
Query: 503 CLRAHMPXXXXXXXXAPH-FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMF 561
L+ ++ PH F ++L + +LRS+S +G +R+ +LK+E PPLI+ M
Sbjct: 459 ALKVYV---RKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEML 515
Query: 562 RAS 564
S
Sbjct: 516 ENS 518
>S50916-1|AAB19602.2| 416|Homo sapiens retinoic acid receptor alpha
protein.
Length = 416
Score = 166 bits (403), Expect = 2e-40
Identities = 113/363 (31%), Positives = 180/363 (49%), Gaps = 16/363 (4%)
Query: 208 ASSSPGVAPADNTGPRAAPSSPS--QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS 265
+SSS + P+ P + P P + C VC D ++ HYGV CEGCKGFF+R++QK
Sbjct: 19 SSSSEEIVPS----PPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM 74
Query: 266 KYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXX 325
Y C +K+C ++ C VGM KE VR D K ++ +
Sbjct: 75 VYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKEVPKPECSESYT 133
Query: 326 XXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMS-DLEVIHQFYSLLTTSID 384
LI + +AH +T P L +Y + E +S D+++ +F L T I
Sbjct: 134 LTPEVGELIEKVRKAHQETFPALCQL--GKYTTNNSSEQRVSLDIDLWDKFSELSTKCII 191
Query: 385 MIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQC 444
FA+++PG+ L D+ L +A L++ +LR+ R E +TF +GL L++ Q
Sbjct: 192 KTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQM 251
Query: 445 QRS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMKIIG 502
+ FG V F+N L +++D + L A+ LI DR L++P RV+ LQ ++
Sbjct: 252 HNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLE 311
Query: 503 CLRAHMPXXXXXXXXAPH-FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMF 561
L+ ++ PH F ++L + +LRS+S +G +R+ +LK+E PPLI+ M
Sbjct: 312 ALKVYV---RKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEML 368
Query: 562 RAS 564
S
Sbjct: 369 ENS 371
>M73779-1|AAA60126.1| 797|Homo sapiens PML-RAR protein protein.
Length = 797
Score = 166 bits (403), Expect = 2e-40
Identities = 113/363 (31%), Positives = 180/363 (49%), Gaps = 16/363 (4%)
Query: 208 ASSSPGVAPADNTGPRAAPSSPS--QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS 265
+SSS + P+ P + P P + C VC D ++ HYGV CEGCKGFF+R++QK
Sbjct: 400 SSSSEEIVPS----PPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM 455
Query: 266 KYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXX 325
Y C +K+C ++ C VGM KE VR D K ++ +
Sbjct: 456 VYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKEVPKPECSESYT 514
Query: 326 XXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMS-DLEVIHQFYSLLTTSID 384
LI + +AH +T P L +Y + E +S D+++ +F L T I
Sbjct: 515 LTPEVGELIEKVRKAHQETFPALCQL--GKYTTNNSSEQRVSLDIDLWDKFSELSTKCII 572
Query: 385 MIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQC 444
FA+++PG+ L D+ L +A L++ +LR+ R E +TF +GL L++ Q
Sbjct: 573 KTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQM 632
Query: 445 QRS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMKIIG 502
+ FG V F+N L +++D + L A+ LI DR L++P RV+ LQ ++
Sbjct: 633 HNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLE 692
Query: 503 CLRAHMPXXXXXXXXAPH-FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMF 561
L+ ++ PH F ++L + +LRS+S +G +R+ +LK+E PPLI+ M
Sbjct: 693 ALKVYV---RKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEML 749
Query: 562 RAS 564
S
Sbjct: 750 ENS 752
>Y00291-1|CAA68398.1| 448|Homo sapiens protein ( Human hap mRNA
encoding a DNA-binding hormone receptor. ).
Length = 448
Score = 165 bits (402), Expect = 3e-40
Identities = 106/336 (31%), Positives = 167/336 (49%), Gaps = 10/336 (2%)
Query: 233 CAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXX 292
C VC D ++ HYGV CEGCKGFF+R++QK Y C +K+C ++
Sbjct: 81 CFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNCVINKVTRNRCQYCRLQK 140
Query: 293 CLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLD 352
C VGM KE VR D K ++ L + +AH +T P L
Sbjct: 141 CFEVGMSKESVRNDRNK-KKKETSKQECTESYEMTAELDDLTEKIRKAHQETFPSLCQL- 198
Query: 353 YSQYREPSPLEPPMS-DLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASA 411
++Y S + + DL + +F L T I I FA+++PG+ L D+ L +A
Sbjct: 199 -AKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAA 257
Query: 412 RLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRS-FGDWLHAVLDFSNTLHSMDIDIS 470
L++ +LR+ R E +TF +GL L++ Q + FG V F+N L +++D +
Sbjct: 258 CLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDT 317
Query: 471 TFACLCALTLIT-DRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPH-FSRVLGAL 528
L A+ LI DR L+EP +V++LQ ++ L+ ++ PH F ++L +
Sbjct: 318 ETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYI---RKRRPSKPHMFPKILMKI 374
Query: 529 PELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRAS 564
+LRS+S +G +R+ +LK+E PPLI+ M S
Sbjct: 375 TDLRSISAKGAERVITLKMEIPGSMPPLIQEMMENS 410
>BC060794-1|AAH60794.1| 448|Homo sapiens retinoic acid receptor,
beta protein.
Length = 448
Score = 165 bits (401), Expect = 4e-40
Identities = 106/336 (31%), Positives = 166/336 (49%), Gaps = 10/336 (2%)
Query: 233 CAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXX 292
C VC D ++ HYGV CEGCKGFF+R++QK Y C +K+C ++
Sbjct: 81 CFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNCVINKVTRNRCQYCRLQK 140
Query: 293 CLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLD 352
C VGM KE VR D K ++ L + +AH +T P L
Sbjct: 141 CFEVGMSKESVRNDRNK-KKKETSKQECTESYEMTAELDDLTEKIRKAHQETFPSLCQL- 198
Query: 353 YSQYREPSPLEPPMS-DLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASA 411
+Y S + + DL + +F L T I I FA+++PG+ L D+ L +A
Sbjct: 199 -GKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAA 257
Query: 412 RLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRS-FGDWLHAVLDFSNTLHSMDIDIS 470
L++ +LR+ R E +TF +GL L++ Q + FG V F+N L +++D +
Sbjct: 258 CLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDT 317
Query: 471 TFACLCALTLIT-DRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPH-FSRVLGAL 528
L A+ LI DR L+EP +V++LQ ++ L+ ++ PH F ++L +
Sbjct: 318 ETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYI---RKRRPSKPHMFPKILMKI 374
Query: 529 PELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRAS 564
+LRS+S +G +R+ +LK+E PPLI+ M S
Sbjct: 375 TDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENS 410
>AJ250835-1|CAB60726.1| 381|Homo sapiens retinoic acid receptor
protein.
Length = 381
Score = 165 bits (400), Expect = 5e-40
Identities = 107/332 (32%), Positives = 164/332 (49%), Gaps = 10/332 (3%)
Query: 233 CAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXX 292
C VC D ++ HYGV +CEGCKGFF+R+ QK Y C +K+C ++
Sbjct: 17 CFVCNDKSSGYHYGVSSCEGCKGFFRRSTQKNMVYTCHRDKNCIINKVTRNRCQYCRLQK 76
Query: 293 CLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLD 352
C VGM KE VR D K ++ + LIT + +AH +T P L
Sbjct: 77 CFEVGMSKEAVRNDRNK-KKKEVKEEGSPDSYELSPQLEELITKVSKAHQETFPSLCQL- 134
Query: 353 YSQYREPSPLEPPMS-DLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASA 411
+Y S + + DL + +F L T I I FA+++PG+ L D+ L +A
Sbjct: 135 -GKYTTNSSADHRVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFAGLSIADQITLLKAA 193
Query: 412 RLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRS-FGDWLHAVLDFSNTLHSMDIDIS 470
L++ +LR+ R E +TF +GL L++ Q + FG V F+ L +++D +
Sbjct: 194 CLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAGQLLPLEMDDT 253
Query: 471 TFACLCALTLIT-DRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPH-FSRVLGAL 528
L A+ LI DR L+EP +V++LQ ++ LR + P+ F R+L +
Sbjct: 254 ETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLY---ARRRRPSQPYMFPRMLMKI 310
Query: 529 PELRSLSVQGLQRIFSLKLEDLVPAPPLIENM 560
+LR +S +G +R +LK+E P PPLI M
Sbjct: 311 TDLRGISTKGAERAITLKMEIPGPMPPLIREM 342
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 151 bits (366), Expect = 6e-36
Identities = 84/159 (52%), Positives = 99/159 (62%), Gaps = 9/159 (5%)
Query: 204 TPN-SASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQ 262
TP+ +ASS G +P+ + P + SS CAVCGD AACQHYGVRTCEGCKGFFKRTVQ
Sbjct: 262 TPSPTASSLLGESPSLPSPPSRSSSSGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQ 321
Query: 263 KGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXX 322
K +KYVCLA K+CPVD CL+VGMVKEVVRTDSLKGRRGRL
Sbjct: 322 KNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSP 381
Query: 323 XXXXXXXXX------XLITALVRAHVDTSPDFANLDYSQ 355
++ ALVRA D++P +LDYS+
Sbjct: 382 LQQEPSQPSPPSPPICMMNALVRALTDSTP--RDLDYSR 418
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 151 bits (366), Expect = 6e-36
Identities = 84/159 (52%), Positives = 99/159 (62%), Gaps = 9/159 (5%)
Query: 204 TPN-SASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQ 262
TP+ +ASS G +P+ + P + SS CAVCGD AACQHYGVRTCEGCKGFFKRTVQ
Sbjct: 262 TPSPTASSLLGESPSLPSPPSRSSSSGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQ 321
Query: 263 KGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXX 322
K +KYVCLA K+CPVD CL+VGMVKEVVRTDSLKGRRGRL
Sbjct: 322 KNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSP 381
Query: 323 XXXXXXXXX------XLITALVRAHVDTSPDFANLDYSQ 355
++ ALVRA D++P +LDYS+
Sbjct: 382 LQQEPSQPSPPSPPICMMNALVRALTDSTP--RDLDYSR 418
>BC050415-1|AAH50415.2| 346|Homo sapiens RARB protein protein.
Length = 346
Score = 133 bits (322), Expect = 1e-30
Identities = 93/314 (29%), Positives = 151/314 (48%), Gaps = 10/314 (3%)
Query: 255 GFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGR 314
GFF+R++QK Y C +K+C ++ C VGM KE VR D K ++
Sbjct: 1 GFFRRSIQKNMIYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKK-E 59
Query: 315 LXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMS-DLEVIH 373
L + +AH +T P L +Y S + + DL +
Sbjct: 60 TSKQECTESYEMTAELDDLTEKIRKAHQETFPSLCQL--GKYTTNSSADHRVRLDLGLWD 117
Query: 374 QFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTF 433
+F L T I I FA+++PG+ L D+ L +A L++ +LR+ R E +TF
Sbjct: 118 KFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTF 177
Query: 434 CNGLVLDKRQCQRS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPH 491
+GL L++ Q + FG V F+N L +++D + L A+ LI DR L+EP
Sbjct: 178 SDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPT 237
Query: 492 RVEQLQMKIIGCLRAHMPXXXXXXXXAPH-FSRVLGALPELRSLSVQGLQRIFSLKLEDL 550
+V++LQ ++ L+ ++ PH F ++L + +LRS+S +G +R+ +LK+E
Sbjct: 238 KVDKLQEPLLEALKIYI---RKRRPSKPHMFPKILMKITDLRSISAKGTERVITLKMEIP 294
Query: 551 VPAPPLIENMFRAS 564
PPLI+ M S
Sbjct: 295 GSMPPLIQEMLENS 308
>AY528719-1|AAS00098.1| 435|Homo sapiens estrogen-related receptor
gamma protein.
Length = 435
Score = 132 bits (318), Expect = 4e-30
Identities = 93/342 (27%), Positives = 152/342 (44%), Gaps = 8/342 (2%)
Query: 227 SSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXX 286
S P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 99 SMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQ 158
Query: 287 XXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSP 346
CL VGM+KE VR D ++G GR L+ + +
Sbjct: 159 ACRFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVS 216
Query: 347 DFANLDYSQ-YREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDRE 405
+ + Y P P P SD++ + L + +I +A+ +PG+ L D+
Sbjct: 217 HLLVAEPEKIYAMPDPTVPD-SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQM 275
Query: 406 QLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ-RSFGDWLHAVLDFSNTLHS 464
L SA +E+ +L + YR+ + +L + + ++D+ Q + D +A+L S
Sbjct: 276 SLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKS 335
Query: 465 MDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSR 523
M ++ F L A+ L +D +++ V++LQ + L+ + +
Sbjct: 336 MKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDY--EAGQHMEDPRRAGK 393
Query: 524 VLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASL 565
+L LP LR S + +Q +++KLE VP L M A +
Sbjct: 394 MLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV 435
>AY388461-1|AAQ93381.1| 435|Homo sapiens estrogen-related receptor
gamma protein.
Length = 435
Score = 132 bits (318), Expect = 4e-30
Identities = 93/342 (27%), Positives = 152/342 (44%), Gaps = 8/342 (2%)
Query: 227 SSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXX 286
S P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 99 SMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQ 158
Query: 287 XXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSP 346
CL VGM+KE VR D ++G GR L+ + +
Sbjct: 159 ACRFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVS 216
Query: 347 DFANLDYSQ-YREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDRE 405
+ + Y P P P SD++ + L + +I +A+ +PG+ L D+
Sbjct: 217 HLLVAEPEKIYAMPDPTVPD-SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQM 275
Query: 406 QLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ-RSFGDWLHAVLDFSNTLHS 464
L SA +E+ +L + YR+ + +L + + ++D+ Q + D +A+L S
Sbjct: 276 SLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKS 335
Query: 465 MDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSR 523
M ++ F L A+ L +D +++ V++LQ + L+ + +
Sbjct: 336 MKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDY--EAGQHMEDPRRAGK 393
Query: 524 VLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASL 565
+L LP LR S + +Q +++KLE VP L M A +
Sbjct: 394 MLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV 435
>AY388460-1|AAQ93380.1| 435|Homo sapiens estrogen-related receptor
gamma protein.
Length = 435
Score = 132 bits (318), Expect = 4e-30
Identities = 93/342 (27%), Positives = 152/342 (44%), Gaps = 8/342 (2%)
Query: 227 SSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXX 286
S P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 99 SMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQ 158
Query: 287 XXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSP 346
CL VGM+KE VR D ++G GR L+ + +
Sbjct: 159 ACRFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVS 216
Query: 347 DFANLDYSQ-YREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDRE 405
+ + Y P P P SD++ + L + +I +A+ +PG+ L D+
Sbjct: 217 HLLVAEPEKIYAMPDPTVPD-SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQM 275
Query: 406 QLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ-RSFGDWLHAVLDFSNTLHS 464
L SA +E+ +L + YR+ + +L + + ++D+ Q + D +A+L S
Sbjct: 276 SLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKS 335
Query: 465 MDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSR 523
M ++ F L A+ L +D +++ V++LQ + L+ + +
Sbjct: 336 MKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDY--EAGQHMEDPRRAGK 393
Query: 524 VLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASL 565
+L LP LR S + +Q +++KLE VP L M A +
Sbjct: 394 MLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV 435
>AY388459-1|AAQ93379.1| 435|Homo sapiens estrogen-related receptor
gamma protein.
Length = 435
Score = 132 bits (318), Expect = 4e-30
Identities = 93/342 (27%), Positives = 152/342 (44%), Gaps = 8/342 (2%)
Query: 227 SSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXX 286
S P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 99 SMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQ 158
Query: 287 XXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSP 346
CL VGM+KE VR D ++G GR L+ + +
Sbjct: 159 ACRFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVS 216
Query: 347 DFANLDYSQ-YREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDRE 405
+ + Y P P P SD++ + L + +I +A+ +PG+ L D+
Sbjct: 217 HLLVAEPEKIYAMPDPTVPD-SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQM 275
Query: 406 QLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ-RSFGDWLHAVLDFSNTLHS 464
L SA +E+ +L + YR+ + +L + + ++D+ Q + D +A+L S
Sbjct: 276 SLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKS 335
Query: 465 MDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSR 523
M ++ F L A+ L +D +++ V++LQ + L+ + +
Sbjct: 336 MKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDY--EAGQHMEDPRRAGK 393
Query: 524 VLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASL 565
+L LP LR S + +Q +++KLE VP L M A +
Sbjct: 394 MLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV 435
>AY388458-1|AAQ93378.1| 435|Homo sapiens estrogen-related receptor
gamma protein.
Length = 435
Score = 132 bits (318), Expect = 4e-30
Identities = 93/342 (27%), Positives = 152/342 (44%), Gaps = 8/342 (2%)
Query: 227 SSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXX 286
S P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 99 SMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQ 158
Query: 287 XXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSP 346
CL VGM+KE VR D ++G GR L+ + +
Sbjct: 159 ACRFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVS 216
Query: 347 DFANLDYSQ-YREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDRE 405
+ + Y P P P SD++ + L + +I +A+ +PG+ L D+
Sbjct: 217 HLLVAEPEKIYAMPDPTVPD-SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQM 275
Query: 406 QLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ-RSFGDWLHAVLDFSNTLHS 464
L SA +E+ +L + YR+ + +L + + ++D+ Q + D +A+L S
Sbjct: 276 SLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKS 335
Query: 465 MDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSR 523
M ++ F L A+ L +D +++ V++LQ + L+ + +
Sbjct: 336 MKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDY--EAGQHMEDPRRAGK 393
Query: 524 VLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASL 565
+L LP LR S + +Q +++KLE VP L M A +
Sbjct: 394 MLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV 435
>AY388457-1|AAQ93377.1| 435|Homo sapiens estrogen-related receptor
gamma protein.
Length = 435
Score = 132 bits (318), Expect = 4e-30
Identities = 93/342 (27%), Positives = 152/342 (44%), Gaps = 8/342 (2%)
Query: 227 SSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXX 286
S P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 99 SMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQ 158
Query: 287 XXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSP 346
CL VGM+KE VR D ++G GR L+ + +
Sbjct: 159 ACRFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVS 216
Query: 347 DFANLDYSQ-YREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDRE 405
+ + Y P P P SD++ + L + +I +A+ +PG+ L D+
Sbjct: 217 HLLVAEPEKIYAMPDPTVPD-SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQM 275
Query: 406 QLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ-RSFGDWLHAVLDFSNTLHS 464
L SA +E+ +L + YR+ + +L + + ++D+ Q + D +A+L S
Sbjct: 276 SLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKS 335
Query: 465 MDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSR 523
M ++ F L A+ L +D +++ V++LQ + L+ + +
Sbjct: 336 MKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDY--EAGQHMEDPRRAGK 393
Query: 524 VLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASL 565
+L LP LR S + +Q +++KLE VP L M A +
Sbjct: 394 MLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV 435
>AY388456-1|AAQ93376.1| 458|Homo sapiens estrogen-related receptor
gamma protein.
Length = 458
Score = 132 bits (318), Expect = 4e-30
Identities = 93/342 (27%), Positives = 152/342 (44%), Gaps = 8/342 (2%)
Query: 227 SSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXX 286
S P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 122 SMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQ 181
Query: 287 XXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSP 346
CL VGM+KE VR D ++G GR L+ + +
Sbjct: 182 ACRFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVS 239
Query: 347 DFANLDYSQ-YREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDRE 405
+ + Y P P P SD++ + L + +I +A+ +PG+ L D+
Sbjct: 240 HLLVAEPEKIYAMPDPTVPD-SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQM 298
Query: 406 QLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ-RSFGDWLHAVLDFSNTLHS 464
L SA +E+ +L + YR+ + +L + + ++D+ Q + D +A+L S
Sbjct: 299 SLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKS 358
Query: 465 MDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSR 523
M ++ F L A+ L +D +++ V++LQ + L+ + +
Sbjct: 359 MKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDY--EAGQHMEDPRRAGK 416
Query: 524 VLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASL 565
+L LP LR S + +Q +++KLE VP L M A +
Sbjct: 417 MLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV 458
>AL512650-1|CAH71594.1| 435|Homo sapiens estrogen-related receptor
gamma protein.
Length = 435
Score = 132 bits (318), Expect = 4e-30
Identities = 93/342 (27%), Positives = 152/342 (44%), Gaps = 8/342 (2%)
Query: 227 SSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXX 286
S P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 99 SMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQ 158
Query: 287 XXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSP 346
CL VGM+KE VR D ++G GR L+ + +
Sbjct: 159 ACRFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVS 216
Query: 347 DFANLDYSQ-YREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDRE 405
+ + Y P P P SD++ + L + +I +A+ +PG+ L D+
Sbjct: 217 HLLVAEPEKIYAMPDPTVPD-SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQM 275
Query: 406 QLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ-RSFGDWLHAVLDFSNTLHS 464
L SA +E+ +L + YR+ + +L + + ++D+ Q + D +A+L S
Sbjct: 276 SLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKS 335
Query: 465 MDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSR 523
M ++ F L A+ L +D +++ V++LQ + L+ + +
Sbjct: 336 MKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDY--EAGQHMEDPRRAGK 393
Query: 524 VLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASL 565
+L LP LR S + +Q +++KLE VP L M A +
Sbjct: 394 MLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV 435
>AL445650-1|CAH70618.1| 435|Homo sapiens estrogen-related receptor
gamma protein.
Length = 435
Score = 132 bits (318), Expect = 4e-30
Identities = 93/342 (27%), Positives = 152/342 (44%), Gaps = 8/342 (2%)
Query: 227 SSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXX 286
S P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 99 SMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQ 158
Query: 287 XXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSP 346
CL VGM+KE VR D ++G GR L+ + +
Sbjct: 159 ACRFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVS 216
Query: 347 DFANLDYSQ-YREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDRE 405
+ + Y P P P SD++ + L + +I +A+ +PG+ L D+
Sbjct: 217 HLLVAEPEKIYAMPDPTVPD-SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQM 275
Query: 406 QLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ-RSFGDWLHAVLDFSNTLHS 464
L SA +E+ +L + YR+ + +L + + ++D+ Q + D +A+L S
Sbjct: 276 SLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKS 335
Query: 465 MDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSR 523
M ++ F L A+ L +D +++ V++LQ + L+ + +
Sbjct: 336 MKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDY--EAGQHMEDPRRAGK 393
Query: 524 VLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASL 565
+L LP LR S + +Q +++KLE VP L M A +
Sbjct: 394 MLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV 435
>AF094518-1|AAC99410.1| 458|Homo sapiens nuclear receptor ERRG2
protein.
Length = 458
Score = 132 bits (318), Expect = 4e-30
Identities = 93/342 (27%), Positives = 152/342 (44%), Gaps = 8/342 (2%)
Query: 227 SSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXX 286
S P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 122 SMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQ 181
Query: 287 XXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSP 346
CL VGM+KE VR D ++G GR L+ + +
Sbjct: 182 ACRFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVS 239
Query: 347 DFANLDYSQ-YREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDRE 405
+ + Y P P P SD++ + L + +I +A+ +PG+ L D+
Sbjct: 240 HLLVAEPEKIYAMPDPTVPD-SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQM 298
Query: 406 QLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ-RSFGDWLHAVLDFSNTLHS 464
L SA +E+ +L + YR+ + +L + + ++D+ Q + D +A+L S
Sbjct: 299 SLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKS 358
Query: 465 MDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSR 523
M ++ F L A+ L +D +++ V++LQ + L+ + +
Sbjct: 359 MKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDY--EAGQHMEDPRRAGK 416
Query: 524 VLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASL 565
+L LP LR S + +Q +++KLE VP L M A +
Sbjct: 417 MLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV 458
>AB020639-1|BAA74855.2| 469|Homo sapiens KIAA0832 protein protein.
Length = 469
Score = 132 bits (318), Expect = 4e-30
Identities = 93/342 (27%), Positives = 152/342 (44%), Gaps = 8/342 (2%)
Query: 227 SSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXX 286
S P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 133 SMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQ 192
Query: 287 XXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSP 346
CL VGM+KE VR D ++G GR L+ + +
Sbjct: 193 ACRFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVS 250
Query: 347 DFANLDYSQ-YREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDRE 405
+ + Y P P P SD++ + L + +I +A+ +PG+ L D+
Sbjct: 251 HLLVAEPEKIYAMPDPTVPD-SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQM 309
Query: 406 QLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ-RSFGDWLHAVLDFSNTLHS 464
L SA +E+ +L + YR+ + +L + + ++D+ Q + D +A+L S
Sbjct: 310 SLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKS 369
Query: 465 MDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSR 523
M ++ F L A+ L +D +++ V++LQ + L+ + +
Sbjct: 370 MKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDY--EAGQHMEDPRRAGK 427
Query: 524 VLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASL 565
+L LP LR S + +Q +++KLE VP L M A +
Sbjct: 428 MLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV 469
>BC064700-1|AAH64700.1| 442|Homo sapiens ESRRG protein protein.
Length = 442
Score = 130 bits (314), Expect = 1e-29
Identities = 95/348 (27%), Positives = 157/348 (45%), Gaps = 13/348 (3%)
Query: 227 SSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXX 286
S P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 99 SMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQ 158
Query: 287 XXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSP 346
CL VGM+KE VR D ++G GR L+ + + + P
Sbjct: 159 ACRFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPLLWSDP 216
Query: 347 -DFANLDYSQYREPSPL----EP--PMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDL 399
D + + EP + +P P SD++ + L + +I +A+ +PG+ L
Sbjct: 217 ADNKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTL 276
Query: 400 CPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ-RSFGDWLHAVLDF 458
D+ L SA +E+ +L + YR+ + +L + + ++D+ Q + D +A+L
Sbjct: 277 SLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQL 336
Query: 459 SNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXX 517
SM ++ F L A+ L +D +++ V++LQ + L+ +
Sbjct: 337 VKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDY--EAGQHMED 394
Query: 518 APHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASL 565
++L LP LR S + +Q +++KLE VP L M A +
Sbjct: 395 PRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV 442
>AL512650-2|CAH71595.1| 442|Homo sapiens estrogen-related receptor
gamma protein.
Length = 442
Score = 130 bits (314), Expect = 1e-29
Identities = 95/348 (27%), Positives = 157/348 (45%), Gaps = 13/348 (3%)
Query: 227 SSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXX 286
S P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 99 SMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQ 158
Query: 287 XXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSP 346
CL VGM+KE VR D ++G GR L+ + + + P
Sbjct: 159 ACRFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPLLWSDP 216
Query: 347 -DFANLDYSQYREPSPL----EP--PMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDL 399
D + + EP + +P P SD++ + L + +I +A+ +PG+ L
Sbjct: 217 ADNKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTL 276
Query: 400 CPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ-RSFGDWLHAVLDF 458
D+ L SA +E+ +L + YR+ + +L + + ++D+ Q + D +A+L
Sbjct: 277 SLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQL 336
Query: 459 SNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXX 517
SM ++ F L A+ L +D +++ V++LQ + L+ +
Sbjct: 337 VKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDY--EAGQHMED 394
Query: 518 APHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASL 565
++L LP LR S + +Q +++KLE VP L M A +
Sbjct: 395 PRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV 442
>AL445650-2|CAH70619.1| 442|Homo sapiens estrogen-related receptor
gamma protein.
Length = 442
Score = 130 bits (314), Expect = 1e-29
Identities = 95/348 (27%), Positives = 157/348 (45%), Gaps = 13/348 (3%)
Query: 227 SSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXX 286
S P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 99 SMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQ 158
Query: 287 XXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSP 346
CL VGM+KE VR D ++G GR L+ + + + P
Sbjct: 159 ACRFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPLLWSDP 216
Query: 347 -DFANLDYSQYREPSPL----EP--PMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDL 399
D + + EP + +P P SD++ + L + +I +A+ +PG+ L
Sbjct: 217 ADNKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTL 276
Query: 400 CPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ-RSFGDWLHAVLDF 458
D+ L SA +E+ +L + YR+ + +L + + ++D+ Q + D +A+L
Sbjct: 277 SLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQL 336
Query: 459 SNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXX 517
SM ++ F L A+ L +D +++ V++LQ + L+ +
Sbjct: 337 VKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDY--EAGQHMED 394
Query: 518 APHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASL 565
++L LP LR S + +Q +++KLE VP L M A +
Sbjct: 395 PRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV 442
>L38487-1|AAB17015.1| 481|Homo sapiens estrogen receptor-related
protein protein.
Length = 481
Score = 128 bits (308), Expect = 7e-29
Identities = 102/364 (28%), Positives = 155/364 (42%), Gaps = 11/364 (3%)
Query: 213 GVAPADNTGPRAAPSS-PSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLA 271
G P + G + SS P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A
Sbjct: 117 GAGPGEQGGGKLVLSSLPKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPA 176
Query: 272 EKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXX 331
C + CL VGM+KE VR D ++G R +
Sbjct: 177 SNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFP 236
Query: 332 XLITALVRAHVDTSPDFANLDYSQYREPSPL----EP--PMSDLEVIHQFYSLLTTSIDM 385
A+ T+P A + + EP L +P P L + L I +
Sbjct: 237 AGPLAVAGGPRKTAPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIVV 296
Query: 386 IKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ 445
+A+ +PG+ L D+ + S +E+ VL +A R+ +L F LVLD+ +
Sbjct: 297 TISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGAR 356
Query: 446 RS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGC 503
+ G+ A+L L ++ ++ + L AL L +D +++ VEQL+ +
Sbjct: 357 AAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHEA 416
Query: 504 LRAHMPXXXXXXXXAP--HFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMF 561
L + A R+L LP LR + + L + +KLE VP L M
Sbjct: 417 LLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFLEML 476
Query: 562 RASL 565
A +
Sbjct: 477 EAMM 480
>X51417-1|CAA35779.1| 433|Homo sapiens protein ( Human mRNA for
steroid hormone receptor hERR2. ).
Length = 433
Score = 124 bits (299), Expect = 8e-28
Identities = 92/345 (26%), Positives = 148/345 (42%), Gaps = 18/345 (5%)
Query: 229 PSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXX 288
P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 99 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 158
Query: 289 XXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXX-----XXXLITALVRAHVD 343
CL VGM+KE VR D ++G R + +T +V +
Sbjct: 159 RFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSENSPYLSLQISPPAKKPLTKIVSYLLV 218
Query: 344 TSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPED 403
PD Y P P + P D++ + L + + +A+ +PG+ +L D
Sbjct: 219 AEPD------KLYAMP-PDDVPEGDIKALTTLCDLADRELVFLISWAKHIPGFSNLTLGD 271
Query: 404 REQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRSFG--DWLHAVLDFSNT 461
+ L SA +E+ +L + YR+ D KL + ++D+ R G + A+L
Sbjct: 272 QMSLLQSAWMEILILGIVYRSLPYDDKLAYAEDYIMDEEH-SRLVGLLELYRAILQLVRR 330
Query: 462 LHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPH 520
+ ++ F L AL L +D ++ V++LQ + L+ +
Sbjct: 331 YKKLKVEKEEFVMLKALALANSDSMYIENLEAVQKLQDLLHEALQDY--ELSQRHEEPRR 388
Query: 521 FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASL 565
++L LP LR + + +Q +S+KL+ VP L M A +
Sbjct: 389 AGKLLLTLPLLRQTAAKAVQHFYSVKLQGKVPMHKLFLEMLEAKV 433
>AY451390-1|AAS15572.1| 508|Homo sapiens estrogen receptor-related
receptor beta2-delta-10 protein.
Length = 508
Score = 124 bits (299), Expect = 8e-28
Identities = 91/344 (26%), Positives = 147/344 (42%), Gaps = 16/344 (4%)
Query: 229 PSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXX 288
P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 99 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 158
Query: 289 XXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXL-----ITALVRAHVD 343
CL VGM+KE VR D ++G R + +T +V +
Sbjct: 159 RFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSESSPYLSLQISPPAKKPLTKIVSYLLV 218
Query: 344 TSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPED 403
PD Y P P P D++ + L + +I +A+ +PG+ L D
Sbjct: 219 AEPD------KLYAMPPP-GMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSSLSLGD 271
Query: 404 REQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ-RSFGDWLHAVLDFSNTL 462
+ L SA +E+ +L + YR+ D KL + ++D+ + + A+L
Sbjct: 272 QMSLLQSAWMEILILGIVYRSLPYDDKLVYAEDYIMDEEHSRLAGLLELYRAILQLVRRY 331
Query: 463 HSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHF 521
+ ++ F L AL L +D +++ V++LQ + L+ +
Sbjct: 332 KKLKVEKEEFVTLKALALANSDSMYIEDLEAVQKLQDLLHEALQDY--ELSQRHEEPWRT 389
Query: 522 SRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASL 565
++L LP LR + + +Q +S+KL+ VP L M A +
Sbjct: 390 GKLLLTLPLLRQTAAKAVQHFYSVKLQGKVPMHKLFLEMLEAKV 433
>AY451389-1|AAS15571.1| 433|Homo sapiens estrogen receptor-related
receptor beta short form protein.
Length = 433
Score = 124 bits (299), Expect = 8e-28
Identities = 91/344 (26%), Positives = 147/344 (42%), Gaps = 16/344 (4%)
Query: 229 PSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXX 288
P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 99 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 158
Query: 289 XXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXL-----ITALVRAHVD 343
CL VGM+KE VR D ++G R + +T +V +
Sbjct: 159 RFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSESSPYLSLQISPPAKKPLTKIVSYLLV 218
Query: 344 TSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPED 403
PD Y P P P D++ + L + +I +A+ +PG+ L D
Sbjct: 219 AEPD------KLYAMPPP-GMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSSLSLGD 271
Query: 404 REQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ-RSFGDWLHAVLDFSNTL 462
+ L SA +E+ +L + YR+ D KL + ++D+ + + A+L
Sbjct: 272 QMSLLQSAWMEILILGIVYRSLPYDDKLVYAEDYIMDEEHSRLAGLLELYRAILQLVRRY 331
Query: 463 HSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHF 521
+ ++ F L AL L +D +++ V++LQ + L+ +
Sbjct: 332 KKLKVEKEEFVTLKALALANSDSMYIEDLEAVQKLQDLLHEALQDY--ELSQRHEEPWRT 389
Query: 522 SRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASL 565
++L LP LR + + +Q +S+KL+ VP L M A +
Sbjct: 390 GKLLLTLPLLRQTAAKAVQHFYSVKLQGKVPMHKLFLEMLEAKV 433
>AF058291-1|AAC39899.1| 436|Homo sapiens estrogen-related receptor
gamma protein.
Length = 436
Score = 124 bits (299), Expect = 8e-28
Identities = 90/342 (26%), Positives = 148/342 (43%), Gaps = 8/342 (2%)
Query: 227 SSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXX 286
S P +LC VCGD A+ HYGV +CE CK FKR +Q +Y C A C +
Sbjct: 99 SMPKRLCLVCGDIASGYHYGVASCEACKASFKRKIQANIEYSCPATNECEITKRRRKSCQ 158
Query: 287 XXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSP 346
CL VGM+KE VR D ++G GR L+ + +
Sbjct: 159 ACRFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVS 216
Query: 347 DFANLDYSQ-YREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDRE 405
+ + Y P P P SD++ + + +I +A+ +PG+ L D+
Sbjct: 217 HLLVAEPEKIYAMPDPTVPD-SDIKALTTLCDCADRELVVIIGWAKHIPGFSTLSLADQM 275
Query: 406 QLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ-RSFGDWLHAVLDFSNTLHS 464
L SA +E+ +L YR+ + +L + + ++D+ Q + D +A+L S
Sbjct: 276 SLLQSAWMEILILGFVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKS 335
Query: 465 MDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSR 523
M ++ F L A+ L +D +++ V++LQ + L+ + +
Sbjct: 336 MKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDY--EAGQHMEDPRRAGK 393
Query: 524 VLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASL 565
+L LP LR S + +Q +++KLE VP L M A +
Sbjct: 394 MLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLEAKV 435
>BC131517-1|AAI31518.1| 503|Homo sapiens ESRRB protein protein.
Length = 503
Score = 124 bits (298), Expect = 1e-27
Identities = 91/344 (26%), Positives = 147/344 (42%), Gaps = 16/344 (4%)
Query: 229 PSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXX 288
P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 99 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 158
Query: 289 XXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXL-----ITALVRAHVD 343
CL VGM+KE VR D ++G R + +T +V +
Sbjct: 159 RFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSESSPYLSLQISPPAKKPLTKIVSYLLV 218
Query: 344 TSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPED 403
PD Y P P P D++ + L + +I +A+ +PG+ L D
Sbjct: 219 AEPD------KLYAMPPP-GMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSSLSLGD 271
Query: 404 REQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ-RSFGDWLHAVLDFSNTL 462
+ L SA +E+ +L + YR+ D KL + ++D+ + + A+L
Sbjct: 272 QMSLLQSAWMEILILGIVYRSLPYDDKLVYAEDYIMDEEHSRLAGLLELYRAILQLVRRY 331
Query: 463 HSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHF 521
+ ++ F L AL L +D +++ V++LQ + L+ +
Sbjct: 332 KKLKVEKEEFVTLKALALANSDSMYIEDLEAVQKLQDLLHEALQDY--ELSQRHEEPWRT 389
Query: 522 SRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASL 565
++L LP LR + + +Q +S+KL+ VP L M A +
Sbjct: 390 GKLLLTLPLLRQTAAKAVQHFYSVKLQGKVPMHKLFLEMVEAKV 433
>AF094517-1|AAC99409.1| 500|Homo sapiens nuclear receptor ERRB2
protein.
Length = 500
Score = 124 bits (298), Expect = 1e-27
Identities = 91/342 (26%), Positives = 146/342 (42%), Gaps = 16/342 (4%)
Query: 229 PSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXX 288
P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 99 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 158
Query: 289 XXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXL-----ITALVRAHVD 343
CL VGM+KE VR D ++G R + +T +V +
Sbjct: 159 RFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSESSPYLSLQISPPAKKPLTKIVSYLLV 218
Query: 344 TSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPED 403
PD Y P P P D++ + L + +I +A+ +PG+ L D
Sbjct: 219 AEPD------KLYAMPPP-GMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSSLSLGD 271
Query: 404 REQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ-RSFGDWLHAVLDFSNTL 462
+ L SA +E+ +L + YR+ D KL + ++D+ + + A+L
Sbjct: 272 QMSLLQSAWMEILILGIVYRSLPYDDKLVYAEDYIMDEEHSRLAGLLELYRAILQLVRRY 331
Query: 463 HSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHF 521
+ ++ F L AL L +D +++ V++LQ + L+ +
Sbjct: 332 KKLKVEKEEFVTLKALALANSDSMYIEDLEAVQKLQDLLHEALQDY--ELSQRHEEPWRT 389
Query: 522 SRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRA 563
++L LP LR + + +Q +S+KL+ VP L M A
Sbjct: 390 GKLLLTLPLLRQTAAKAVQHFYSVKLQGKVPMHKLFLEMLEA 431
>DQ514553-1|ABF47104.1| 423|Homo sapiens estrogen-related receptor
alpha protein.
Length = 423
Score = 123 bits (297), Expect = 1e-27
Identities = 102/365 (27%), Positives = 155/365 (42%), Gaps = 12/365 (3%)
Query: 213 GVAPADNTGPRAAPSS-PSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLA 271
G P + G + SS P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A
Sbjct: 58 GAGPGEQGGGKLVLSSLPKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPA 117
Query: 272 EKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXX 331
C + CL VGM+KE VR D ++G R +
Sbjct: 118 SNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFP 177
Query: 332 XLITALVRAHVDT-SPDFANLDYSQYREPSPL----EP--PMSDLEVIHQFYSLLTTSID 384
A+ T +P A + + EP L +P P L + L I
Sbjct: 178 AGPLAVAGGPRKTAAPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIV 237
Query: 385 MIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQC 444
+ +A+ +PG+ L D+ + S +E+ VL +A R+ +L F LVLD+
Sbjct: 238 VTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGA 297
Query: 445 QRS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIG 502
+ + G+ A+L L ++ ++ + L AL L +D +++ VEQL+ +
Sbjct: 298 RAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHE 357
Query: 503 CLRAHMPXXXXXXXXAP--HFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENM 560
L + A R+L LP LR + + L + +KLE VP L M
Sbjct: 358 ALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFLEM 417
Query: 561 FRASL 565
A +
Sbjct: 418 LEAMM 422
>BC093722-1|AAH93722.1| 423|Homo sapiens estrogen-related receptor
alpha protein.
Length = 423
Score = 123 bits (297), Expect = 1e-27
Identities = 102/365 (27%), Positives = 155/365 (42%), Gaps = 12/365 (3%)
Query: 213 GVAPADNTGPRAAPSS-PSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLA 271
G P + G + SS P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A
Sbjct: 58 GAGPGEQGGGKLVLSSLPKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPA 117
Query: 272 EKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXX 331
C + CL VGM+KE VR D ++G R +
Sbjct: 118 SNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFP 177
Query: 332 XLITALVRAHVDT-SPDFANLDYSQYREPSPL----EP--PMSDLEVIHQFYSLLTTSID 384
A+ T +P A + + EP L +P P L + L I
Sbjct: 178 AGPLAVAGGPRKTAAPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIV 237
Query: 385 MIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQC 444
+ +A+ +PG+ L D+ + S +E+ VL +A R+ +L F LVLD+
Sbjct: 238 VTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGA 297
Query: 445 QRS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIG 502
+ + G+ A+L L ++ ++ + L AL L +D +++ VEQL+ +
Sbjct: 298 RAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHE 357
Query: 503 CLRAHMPXXXXXXXXAP--HFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENM 560
L + A R+L LP LR + + L + +KLE VP L M
Sbjct: 358 ALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFLEM 417
Query: 561 FRASL 565
A +
Sbjct: 418 LEAMM 422
>BC093720-1|AAH93720.1| 423|Homo sapiens estrogen-related receptor
alpha protein.
Length = 423
Score = 123 bits (297), Expect = 1e-27
Identities = 102/365 (27%), Positives = 155/365 (42%), Gaps = 12/365 (3%)
Query: 213 GVAPADNTGPRAAPSS-PSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLA 271
G P + G + SS P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A
Sbjct: 58 GAGPGEQGGGKLVLSSLPKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPA 117
Query: 272 EKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXX 331
C + CL VGM+KE VR D ++G R +
Sbjct: 118 SNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFP 177
Query: 332 XLITALVRAHVDT-SPDFANLDYSQYREPSPL----EP--PMSDLEVIHQFYSLLTTSID 384
A+ T +P A + + EP L +P P L + L I
Sbjct: 178 AGPLAVAGGPRKTAAPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIV 237
Query: 385 MIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQC 444
+ +A+ +PG+ L D+ + S +E+ VL +A R+ +L F LVLD+
Sbjct: 238 VTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGA 297
Query: 445 QRS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIG 502
+ + G+ A+L L ++ ++ + L AL L +D +++ VEQL+ +
Sbjct: 298 RAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHE 357
Query: 503 CLRAHMPXXXXXXXXAP--HFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENM 560
L + A R+L LP LR + + L + +KLE VP L M
Sbjct: 358 ALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFLEM 417
Query: 561 FRASL 565
A +
Sbjct: 418 LEAMM 422
>BC092470-1|AAH92470.1| 423|Homo sapiens ESRRA protein protein.
Length = 423
Score = 123 bits (297), Expect = 1e-27
Identities = 102/365 (27%), Positives = 155/365 (42%), Gaps = 12/365 (3%)
Query: 213 GVAPADNTGPRAAPSS-PSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLA 271
G P + G + SS P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A
Sbjct: 58 GAGPGEQGGGKLVLSSLPKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPA 117
Query: 272 EKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXX 331
C + CL VGM+KE VR D ++G R +
Sbjct: 118 SNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFP 177
Query: 332 XLITALVRAHVDT-SPDFANLDYSQYREPSPL----EP--PMSDLEVIHQFYSLLTTSID 384
A+ T +P A + + EP L +P P L + L I
Sbjct: 178 AGPLAVAGGPRKTAAPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIV 237
Query: 385 MIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQC 444
+ +A+ +PG+ L D+ + S +E+ VL +A R+ +L F LVLD+
Sbjct: 238 VTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGA 297
Query: 445 QRS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIG 502
+ + G+ A+L L ++ ++ + L AL L +D +++ VEQL+ +
Sbjct: 298 RAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHE 357
Query: 503 CLRAHMPXXXXXXXXAP--HFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENM 560
L + A R+L LP LR + + L + +KLE VP L M
Sbjct: 358 ALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFLEM 417
Query: 561 FRASL 565
A +
Sbjct: 418 LEAMM 422
>BC063795-1|AAH63795.2| 423|Homo sapiens estrogen-related receptor
alpha protein.
Length = 423
Score = 123 bits (297), Expect = 1e-27
Identities = 102/365 (27%), Positives = 155/365 (42%), Gaps = 12/365 (3%)
Query: 213 GVAPADNTGPRAAPSS-PSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLA 271
G P + G + SS P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A
Sbjct: 58 GAGPGEQGGGKLVLSSLPKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPA 117
Query: 272 EKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXX 331
C + CL VGM+KE VR D ++G R +
Sbjct: 118 SNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFP 177
Query: 332 XLITALVRAHVDT-SPDFANLDYSQYREPSPL----EP--PMSDLEVIHQFYSLLTTSID 384
A+ T +P A + + EP L +P P L + L I
Sbjct: 178 AGPLAVAGGPRKTAAPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIV 237
Query: 385 MIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQC 444
+ +A+ +PG+ L D+ + S +E+ VL +A R+ +L F LVLD+
Sbjct: 238 VTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGA 297
Query: 445 QRS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIG 502
+ + G+ A+L L ++ ++ + L AL L +D +++ VEQL+ +
Sbjct: 298 RAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHE 357
Query: 503 CLRAHMPXXXXXXXXAP--HFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENM 560
L + A R+L LP LR + + L + +KLE VP L M
Sbjct: 358 ALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFLEM 417
Query: 561 FRASL 565
A +
Sbjct: 418 LEAMM 422
>D85242-1|BAA31221.1| 143|Homo sapiens NOR-1 3'-variant protein.
Length = 143
Score = 123 bits (296), Expect = 2e-27
Identities = 66/120 (55%), Positives = 75/120 (62%), Gaps = 8/120 (6%)
Query: 242 CQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKE 301
CQHYGVRTCEGCKGFFKRTVQK +KYVCLA K+CPVD CL+VGMVKE
Sbjct: 1 CQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMVKE 60
Query: 302 VVRTDSLKGRRGRLXXXXXXXXXXXXXXXX------XLITALVRAHVDTSPDFANLDYSQ 355
VVRTDSLKGRRGRL ++ ALVRA D++P +LDYS+
Sbjct: 61 VVRTDSLKGRRGRLPSKPKSPLQQEPSQPSPPSPPICMMNALVRALTDSTP--RDLDYSR 118
>U38480-1|AAA80681.1| 463|Homo sapiens retinoid X receptor-gamma
protein.
Length = 463
Score = 122 bits (295), Expect = 3e-27
Identities = 98/376 (26%), Positives = 159/376 (42%), Gaps = 25/376 (6%)
Query: 201 QPSTPNSASSS------PGVAPADNTG-PRAAPSS-PSQLCAVCGDTAACQHYGVRTCEG 252
Q + NS SSS PG+ N P +P S +CA+CGD ++ +HYGV +CEG
Sbjct: 99 QLNVVNSVSSSEDIKPLPGLPGIGNMNYPSTSPGSLVKHICAICGDRSSGKHYGVYSCEG 158
Query: 253 CKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRR 312
CKGFFKRT++K Y C K C +D CL +GM +E V+ + + R
Sbjct: 159 CKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRE 218
Query: 313 GRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVI 372
+ ++ A + P + Y + P+++ +
Sbjct: 219 ----RAESEAECATSGHEDMPVERILEAELAVEPKTES--YGDMNMENSTNDPVTN--IC 270
Query: 373 HQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLT 432
H L T ++ +A+++P + DL ED+ L + EL + ++R+ +
Sbjct: 271 HAADKQLFTLVE----WAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGIL 326
Query: 433 FCNGLVLDKRQCQRS-FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT-DRHGLKE 489
GL + + + G VL + + + M +D S CL A+ L D GL
Sbjct: 327 LATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSN 386
Query: 490 PHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLED 549
P VE L+ K+ L A+ F+++L LP LRS+ ++ L+ +F KL
Sbjct: 387 PSEVETLREKVYATLEAY--TKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG 444
Query: 550 LVPAPPLIENMFRASL 565
P + M L
Sbjct: 445 DTPIDTFLMEMLETPL 460
>CR456705-1|CAG32986.1| 463|Homo sapiens RXRG protein.
Length = 463
Score = 122 bits (295), Expect = 3e-27
Identities = 98/376 (26%), Positives = 159/376 (42%), Gaps = 25/376 (6%)
Query: 201 QPSTPNSASSS------PGVAPADNTG-PRAAPSS-PSQLCAVCGDTAACQHYGVRTCEG 252
Q + NS SSS PG+ N P +P S +CA+CGD ++ +HYGV +CEG
Sbjct: 99 QLNVVNSVSSSEDIKPLPGLPGIGNMNYPSTSPGSLVKHICAICGDRSSGKHYGVYSCEG 158
Query: 253 CKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRR 312
CKGFFKRT++K Y C K C +D CL +GM +E V+ + + R
Sbjct: 159 CKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRE 218
Query: 313 GRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVI 372
+ ++ A + P + Y + P+++ +
Sbjct: 219 ----RAESEAECATSGHEDMPVERILEAELAVEPKTES--YGDMNMENSTNDPVTN--IC 270
Query: 373 HQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLT 432
H L T ++ +A+++P + DL ED+ L + EL + ++R+ +
Sbjct: 271 HAADKQLFTLVE----WAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGIL 326
Query: 433 FCNGLVLDKRQCQRS-FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT-DRHGLKE 489
GL + + + G VL + + + M +D S CL A+ L D GL
Sbjct: 327 LATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSN 386
Query: 490 PHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLED 549
P VE L+ K+ L A+ F+++L LP LRS+ ++ L+ +F KL
Sbjct: 387 PSEVETLREKVYATLEAY--TKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG 444
Query: 550 LVPAPPLIENMFRASL 565
P + M L
Sbjct: 445 DTPIDTFLMEMLETPL 460
>BC012063-1|AAH12063.1| 463|Homo sapiens retinoid X receptor, gamma
protein.
Length = 463
Score = 122 bits (295), Expect = 3e-27
Identities = 98/376 (26%), Positives = 159/376 (42%), Gaps = 25/376 (6%)
Query: 201 QPSTPNSASSS------PGVAPADNTG-PRAAPSS-PSQLCAVCGDTAACQHYGVRTCEG 252
Q + NS SSS PG+ N P +P S +CA+CGD ++ +HYGV +CEG
Sbjct: 99 QLNVVNSVSSSEDIKPLPGLPGIGNMNYPSTSPGSLVKHICAICGDRSSGKHYGVYSCEG 158
Query: 253 CKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRR 312
CKGFFKRT++K Y C K C +D CL +GM +E V+ + + R
Sbjct: 159 CKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRE 218
Query: 313 GRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVI 372
+ ++ A + P + Y + P+++ +
Sbjct: 219 ----RAESEAECATSGHEDMPVERILEAELAVEPKTES--YGDMNMENSTNDPVTN--IC 270
Query: 373 HQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLT 432
H L T ++ +A+++P + DL ED+ L + EL + ++R+ +
Sbjct: 271 HAADKQLFTLVE----WAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGIL 326
Query: 433 FCNGLVLDKRQCQRS-FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT-DRHGLKE 489
GL + + + G VL + + + M +D S CL A+ L D GL
Sbjct: 327 LATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSN 386
Query: 490 PHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLED 549
P VE L+ K+ L A+ F+++L LP LRS+ ++ L+ +F KL
Sbjct: 387 PSEVETLREKVYATLEAY--TKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG 444
Query: 550 LVPAPPLIENMFRASL 565
P + M L
Sbjct: 445 DTPIDTFLMEMLETPL 460
>AL160058-2|CAC00596.1| 463|Homo sapiens retinoid X receptor, gamma
protein.
Length = 463
Score = 122 bits (295), Expect = 3e-27
Identities = 98/376 (26%), Positives = 159/376 (42%), Gaps = 25/376 (6%)
Query: 201 QPSTPNSASSS------PGVAPADNTG-PRAAPSS-PSQLCAVCGDTAACQHYGVRTCEG 252
Q + NS SSS PG+ N P +P S +CA+CGD ++ +HYGV +CEG
Sbjct: 99 QLNVVNSVSSSEDIKPLPGLPGIGNMNYPSTSPGSLVKHICAICGDRSSGKHYGVYSCEG 158
Query: 253 CKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRR 312
CKGFFKRT++K Y C K C +D CL +GM +E V+ + + R
Sbjct: 159 CKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRE 218
Query: 313 GRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVI 372
+ ++ A + P + Y + P+++ +
Sbjct: 219 ----RAESEAECATSGHEDMPVERILEAELAVEPKTES--YGDMNMENSTNDPVTN--IC 270
Query: 373 HQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLT 432
H L T ++ +A+++P + DL ED+ L + EL + ++R+ +
Sbjct: 271 HAADKQLFTLVE----WAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGIL 326
Query: 433 FCNGLVLDKRQCQRS-FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT-DRHGLKE 489
GL + + + G VL + + + M +D S CL A+ L D GL
Sbjct: 327 LATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSN 386
Query: 490 PHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLED 549
P VE L+ K+ L A+ F+++L LP LRS+ ++ L+ +F KL
Sbjct: 387 PSEVETLREKVYATLEAY--TKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG 444
Query: 550 LVPAPPLIENMFRASL 565
P + M L
Sbjct: 445 DTPIDTFLMEMLETPL 460
>AY501390-1|AAS85757.1| 336|Homo sapiens retinoic acid receptor
beta 5 protein.
Length = 336
Score = 119 bits (287), Expect = 2e-26
Identities = 87/302 (28%), Positives = 142/302 (47%), Gaps = 10/302 (3%)
Query: 267 YVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXX 326
Y C +K+C ++ C VGM KE VR D K ++
Sbjct: 3 YTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKK-ETSKQECTESYEM 61
Query: 327 XXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMS-DLEVIHQFYSLLTTSIDM 385
L + +AH +T P L +Y S + + DL + +F L T I
Sbjct: 62 TAELDDLTEKIRKAHQETFPSLCQL--GKYTTNSSADHRVRLDLGLWDKFSELATKCIIK 119
Query: 386 IKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ 445
I FA+++PG+ L D+ L +A L++ +LR+ R E +TF +GL L++ Q
Sbjct: 120 IVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMH 179
Query: 446 RS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMKIIGC 503
+ FG V F+N L +++D + L A+ LI DR L+EP +V++LQ ++
Sbjct: 180 NAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEA 239
Query: 504 LRAHMPXXXXXXXXAPH-FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFR 562
L+ ++ PH F ++L + +LRS+S +G +R+ +LK+E PPLI+ M
Sbjct: 240 LKIYI---RKRRPSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLE 296
Query: 563 AS 564
S
Sbjct: 297 NS 298
>AF157483-1|AAD45688.1| 336|Homo sapiens retinoic acid receptor
beta 4 protein.
Length = 336
Score = 119 bits (287), Expect = 2e-26
Identities = 87/302 (28%), Positives = 142/302 (47%), Gaps = 10/302 (3%)
Query: 267 YVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXX 326
Y C +K+C ++ C VGM KE VR D K ++
Sbjct: 3 YTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKK-ETSKQECTESYEM 61
Query: 327 XXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMS-DLEVIHQFYSLLTTSIDM 385
L + +AH +T P L +Y S + + DL + +F L T I
Sbjct: 62 TAELDDLTEKIRKAHQETFPSLCQL--GKYTTNSSADHRVRLDLGLWDKFSELATKCIIK 119
Query: 386 IKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ 445
I FA+++PG+ L D+ L +A L++ +LR+ R E +TF +GL L++ Q
Sbjct: 120 IVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMH 179
Query: 446 RS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMKIIGC 503
+ FG V F+N L +++D + L A+ LI DR L+EP +V++LQ ++
Sbjct: 180 NAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEA 239
Query: 504 LRAHMPXXXXXXXXAPH-FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFR 562
L+ ++ PH F ++L + +LRS+S +G +R+ +LK+E PPLI+ M
Sbjct: 240 LKIYI---RKRRPSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLE 296
Query: 563 AS 564
S
Sbjct: 297 NS 298
>CR536558-1|CAG38795.1| 336|Homo sapiens RARB protein.
Length = 336
Score = 118 bits (285), Expect = 4e-26
Identities = 87/302 (28%), Positives = 142/302 (47%), Gaps = 10/302 (3%)
Query: 267 YVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXX 326
Y C +K+C ++ C VGM KE VR D K ++
Sbjct: 3 YTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKK-ETSKQECTESYEM 61
Query: 327 XXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMS-DLEVIHQFYSLLTTSIDM 385
L + +AH +T P L +Y S + + DL + +F L T I
Sbjct: 62 TAELDDLTEKIRKAHQETFPSLCQL--GKYTTNSSADHRVRLDLGLWDKFSELATKCIIK 119
Query: 386 IKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ 445
I FA+++PG+ L D+ L +A L++ +LR+ R E +TF +GL L++ Q
Sbjct: 120 IVEFAKRLPGFTGLTIADQITLLKAACLDILILRIYTRYTPEQDTMTFSDGLTLNRTQMH 179
Query: 446 RS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMKIIGC 503
+ FG V F+N L +++D + L A+ LI DR L+EP +V++LQ ++
Sbjct: 180 NAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEA 239
Query: 504 LRAHMPXXXXXXXXAPH-FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFR 562
L+ ++ PH F ++L + +LRS+S +G +R+ +LK+E PPLI+ M
Sbjct: 240 LKIYI---RKRRPSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLE 296
Query: 563 AS 564
S
Sbjct: 297 NS 298
>X52773-1|CAA36982.1| 462|Homo sapiens protein ( Human mRNA for
retinoic acid receptor-like protein. ).
Length = 462
Score = 118 bits (283), Expect = 7e-26
Identities = 97/376 (25%), Positives = 161/376 (42%), Gaps = 24/376 (6%)
Query: 201 QPSTP-NSASSSPGVAPADN-TGPRAAPSSPS--------QLCAVCGDTAACQHYGVRTC 250
Q S+P N SSS + P G P+ PS +CA+CGD ++ +HYGV +C
Sbjct: 93 QLSSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSC 152
Query: 251 EGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKG 310
EGCKGFFKRTV+K Y C K C +D CLA+GM +E V+ + +G
Sbjct: 153 EGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRG 212
Query: 311 RRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLE 370
+ ++ A + T ++ + PS P+++
Sbjct: 213 KDRNENEVESTSSANEDMPVERILEAELAVEPKTE---TYVEANMGLNPSSPNDPVTN-- 267
Query: 371 VIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTK 430
+ L T ++ +A+++P + +L +D+ L + EL + ++R+
Sbjct: 268 ICQAADKQLFTLVE----WAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDG 323
Query: 431 LTFCNGLVLDKRQCQRS-FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT-DRHGL 487
+ GL + + + G VL + + + M +D + CL A+ L D GL
Sbjct: 324 ILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGL 383
Query: 488 KEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKL 547
P VE L+ K+ L A+ F+++L LP LRS+ ++ L+ +F KL
Sbjct: 384 SNPAEVEALREKVYASLEAYC--KHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKL 441
Query: 548 EDLVPAPPLIENMFRA 563
P + M A
Sbjct: 442 IGDTPIDTFLMEMLEA 457
>DQ303444-1|ABB96254.1| 452|Homo sapiens retinoid X receptor, alpha
protein.
Length = 452
Score = 118 bits (283), Expect = 7e-26
Identities = 97/376 (25%), Positives = 161/376 (42%), Gaps = 24/376 (6%)
Query: 201 QPSTP-NSASSSPGVAPADN-TGPRAAPSSPS--------QLCAVCGDTAACQHYGVRTC 250
Q S+P N SSS + P G P+ PS +CA+CGD ++ +HYGV +C
Sbjct: 83 QLSSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSC 142
Query: 251 EGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKG 310
EGCKGFFKRTV+K Y C K C +D CLA+GM +E V+ + +G
Sbjct: 143 EGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRG 202
Query: 311 RRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLE 370
+ ++ A + T ++ + PS P+++
Sbjct: 203 KDRNENEVESTSSANEDMPVERILEAELAVEPKTE---TYVEANMGLNPSSPNDPVTN-- 257
Query: 371 VIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTK 430
+ L T ++ +A+++P + +L +D+ L + EL + ++R+
Sbjct: 258 ICQAADKQLFTLVE----WAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDG 313
Query: 431 LTFCNGLVLDKRQCQRS-FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT-DRHGL 487
+ GL + + + G VL + + + M +D + CL A+ L D GL
Sbjct: 314 ILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGL 373
Query: 488 KEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKL 547
P VE L+ K+ L A+ F+++L LP LRS+ ++ L+ +F KL
Sbjct: 374 SNPAEVEALREKVYASLEAYC--KHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKL 431
Query: 548 EDLVPAPPLIENMFRA 563
P + M A
Sbjct: 432 IGDTPIDTFLMEMLEA 447
>BC110998-1|AAI10999.1| 462|Homo sapiens retinoid X receptor, alpha
protein.
Length = 462
Score = 118 bits (283), Expect = 7e-26
Identities = 97/376 (25%), Positives = 161/376 (42%), Gaps = 24/376 (6%)
Query: 201 QPSTP-NSASSSPGVAPADN-TGPRAAPSSPS--------QLCAVCGDTAACQHYGVRTC 250
Q S+P N SSS + P G P+ PS +CA+CGD ++ +HYGV +C
Sbjct: 93 QLSSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSC 152
Query: 251 EGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKG 310
EGCKGFFKRTV+K Y C K C +D CLA+GM +E V+ + +G
Sbjct: 153 EGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRG 212
Query: 311 RRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLE 370
+ ++ A + T ++ + PS P+++
Sbjct: 213 KDRNENEVESTSSANEDMPVERILEAELAVEPKTE---TYVEANMGLNPSSPNDPVTN-- 267
Query: 371 VIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTK 430
+ L T ++ +A+++P + +L +D+ L + EL + ++R+
Sbjct: 268 ICQAADKQLFTLVE----WAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDG 323
Query: 431 LTFCNGLVLDKRQCQRS-FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT-DRHGL 487
+ GL + + + G VL + + + M +D + CL A+ L D GL
Sbjct: 324 ILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGL 383
Query: 488 KEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKL 547
P VE L+ K+ L A+ F+++L LP LRS+ ++ L+ +F KL
Sbjct: 384 SNPAEVEALREKVYASLEAYC--KHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKL 441
Query: 548 EDLVPAPPLIENMFRA 563
P + M A
Sbjct: 442 IGDTPIDTFLMEMLEA 457
>BC063827-1|AAH63827.1| 516|Homo sapiens RXRA protein protein.
Length = 516
Score = 118 bits (283), Expect = 7e-26
Identities = 97/376 (25%), Positives = 161/376 (42%), Gaps = 24/376 (6%)
Query: 201 QPSTP-NSASSSPGVAPADN-TGPRAAPSSPS--------QLCAVCGDTAACQHYGVRTC 250
Q S+P N SSS + P G P+ PS +CA+CGD ++ +HYGV +C
Sbjct: 147 QLSSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSC 206
Query: 251 EGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKG 310
EGCKGFFKRTV+K Y C K C +D CLA+GM +E V+ + +G
Sbjct: 207 EGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRG 266
Query: 311 RRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLE 370
+ ++ A + T ++ + PS P+++
Sbjct: 267 KDRNENEVESTSSANEDMPVERILEAELAVEPKTE---TYVEANMGLNPSSPNDPVTN-- 321
Query: 371 VIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTK 430
+ L T ++ +A+++P + +L +D+ L + EL + ++R+
Sbjct: 322 ICQAADKQLFTLVE----WAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDG 377
Query: 431 LTFCNGLVLDKRQCQRS-FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT-DRHGL 487
+ GL + + + G VL + + + M +D + CL A+ L D GL
Sbjct: 378 ILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGL 437
Query: 488 KEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKL 547
P VE L+ K+ L A+ F+++L LP LRS+ ++ L+ +F KL
Sbjct: 438 SNPAEVEALREKVYASLEAYC--KHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKL 495
Query: 548 EDLVPAPPLIENMFRA 563
P + M A
Sbjct: 496 IGDTPIDTFLMEMLEA 511
>AL669970-1|CAM45733.1| 462|Homo sapiens retinoid X receptor, alpha
protein.
Length = 462
Score = 118 bits (283), Expect = 7e-26
Identities = 97/376 (25%), Positives = 161/376 (42%), Gaps = 24/376 (6%)
Query: 201 QPSTP-NSASSSPGVAPADN-TGPRAAPSSPS--------QLCAVCGDTAACQHYGVRTC 250
Q S+P N SSS + P G P+ PS +CA+CGD ++ +HYGV +C
Sbjct: 93 QLSSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSC 152
Query: 251 EGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKG 310
EGCKGFFKRTV+K Y C K C +D CLA+GM +E V+ + +G
Sbjct: 153 EGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRG 212
Query: 311 RRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLE 370
+ ++ A + T ++ + PS P+++
Sbjct: 213 KDRNENEVESTSSANEDMPVERILEAELAVEPKTE---TYVEANMGLNPSSPNDPVTN-- 267
Query: 371 VIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTK 430
+ L T ++ +A+++P + +L +D+ L + EL + ++R+
Sbjct: 268 ICQAADKQLFTLVE----WAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDG 323
Query: 431 LTFCNGLVLDKRQCQRS-FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT-DRHGL 487
+ GL + + + G VL + + + M +D + CL A+ L D GL
Sbjct: 324 ILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGL 383
Query: 488 KEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKL 547
P VE L+ K+ L A+ F+++L LP LRS+ ++ L+ +F KL
Sbjct: 384 SNPAEVEALREKVYASLEAYC--KHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKL 441
Query: 548 EDLVPAPPLIENMFRA 563
P + M A
Sbjct: 442 IGDTPIDTFLMEMLEA 457
>AL354796-1|CAH70571.1| 462|Homo sapiens retinoid X receptor, alpha
protein.
Length = 462
Score = 118 bits (283), Expect = 7e-26
Identities = 97/376 (25%), Positives = 161/376 (42%), Gaps = 24/376 (6%)
Query: 201 QPSTP-NSASSSPGVAPADN-TGPRAAPSSPS--------QLCAVCGDTAACQHYGVRTC 250
Q S+P N SSS + P G P+ PS +CA+CGD ++ +HYGV +C
Sbjct: 93 QLSSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSC 152
Query: 251 EGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKG 310
EGCKGFFKRTV+K Y C K C +D CLA+GM +E V+ + +G
Sbjct: 153 EGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRG 212
Query: 311 RRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLE 370
+ ++ A + T ++ + PS P+++
Sbjct: 213 KDRNENEVESTSSANEDMPVERILEAELAVEPKTE---TYVEANMGLNPSSPNDPVTN-- 267
Query: 371 VIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTK 430
+ L T ++ +A+++P + +L +D+ L + EL + ++R+
Sbjct: 268 ICQAADKQLFTLVE----WAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDG 323
Query: 431 LTFCNGLVLDKRQCQRS-FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT-DRHGL 487
+ GL + + + G VL + + + M +D + CL A+ L D GL
Sbjct: 324 ILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGL 383
Query: 488 KEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKL 547
P VE L+ K+ L A+ F+++L LP LRS+ ++ L+ +F KL
Sbjct: 384 SNPAEVEALREKVYASLEAYC--KHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKL 441
Query: 548 EDLVPAPPLIENMFRA 563
P + M A
Sbjct: 442 IGDTPIDTFLMEMLEA 457
>BT019411-1|AAV38218.1| 447|Homo sapiens nuclear receptor subfamily
1, group H, member 3 protein.
Length = 447
Score = 117 bits (282), Expect = 1e-25
Identities = 104/436 (23%), Positives = 190/436 (43%), Gaps = 30/436 (6%)
Query: 152 LPPFPSTVDL-HISAEQAARQRRS-SLPVQRSESNSSNDSPKLHGTRVHCMQPSTPNSAS 209
+PP S V+L A+ A+ Q + S + R E+ + + G + +P+ + +
Sbjct: 12 IPP-DSAVELWKPGAQDASSQAQGGSSCILREEARMPHSAGGTAGVGLEAAEPTALLTRA 70
Query: 210 SSPG----VAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS 265
P + P A ++LC+VCGD A+ HY V +CEGCKGFF+R+V KG+
Sbjct: 71 EPPSEPKEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGA 130
Query: 266 KYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDS----LKGRRGRLXXXXXX 321
Y+C + CP+D C GM +E V ++ K +R
Sbjct: 131 HYICHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQIRLKKLKRQEEEQAHAT 190
Query: 322 XXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYRE---------PSPLEPPMSDLEVI 372
++ L R + R P P+ P E
Sbjct: 191 SLPPRASSPPQILPQLSREQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPMAPDPHSREAR 250
Query: 373 HQ----FYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLED 428
Q F L S+ I FA+++PG+ L ED+ L ++ +E+ +L + R
Sbjct: 251 QQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRYNPGS 310
Query: 429 TKLTFCNGLVLDKRQCQRS--FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRH 485
+TF ++ ++ ++++ + +FS ++ + ++ + FA L A+++ + DR
Sbjct: 311 ESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLIAISIFSADRP 370
Query: 486 GLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSL 545
+++ +VE+LQ + L A++ F R+L L LR+LS +++F+L
Sbjct: 371 NVQDQLQVERLQHTYVEALHAYVSIHHPHDRLM--FPRMLMKLVSLRTLSSVHSEQVFAL 428
Query: 546 KLEDLVPAPPLIENMF 561
+L+D PPL+ ++
Sbjct: 429 RLQD-KKLPPLLSEIW 443
>X16155-1|CAA34277.1| 418|Homo sapiens COUP-TF protein.
Length = 418
Score = 116 bits (280), Expect = 2e-25
Identities = 100/375 (26%), Positives = 160/375 (42%), Gaps = 22/375 (5%)
Query: 202 PSTPNS--ASSSPGVAPADNTGPRAAPSSPSQL-CAVCGDTAACQHYGVRTCEGCKGFFK 258
P TP A ++PG A GP + S + C VCGD ++ +HYG TCEGCK FFK
Sbjct: 47 PQTPGQPGAPATPGTAGDKGQGPPGSGQSQQHIECVVCGDKSSGKHYGQFTCEGCKSFFK 106
Query: 259 RTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGR--LX 316
R+V++ Y C A ++CP+D CL VGM +E V+ + +
Sbjct: 107 RSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQPNPGQY 166
Query: 317 XXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFY 376
I+ L+RA + + SQ +P+ + M +
Sbjct: 167 ALTNGDPLNGHCYLSGYISLLLRAEPYPTSRYG----SQCMQPNNI---MGIENICELAA 219
Query: 377 SLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTR-LEDTKLTFCN 435
LL ++++ +A +P + DL D+ L ELFVL A + L L
Sbjct: 220 RLLFSAVE----WARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLHVAPLLAAA 275
Query: 436 GLVLDKRQCQR--SFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHR 492
GL R +F D + + L ++ +D + ++CL A+ L T D GL +
Sbjct: 276 GLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDAAH 335
Query: 493 VEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVP 552
+E LQ K L ++ F ++L LP LR++S ++++F ++L P
Sbjct: 336 IESLQEKSQCALEEYV--RSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTP 393
Query: 553 APPLIENMFRASLPF 567
LI +M + F
Sbjct: 394 IETLIRDMLLSGSSF 408
>X12795-1|CAA31283.1| 423|Homo sapiens protein ( Human v-erbA
related ear-3 gene. ).
Length = 423
Score = 116 bits (280), Expect = 2e-25
Identities = 100/375 (26%), Positives = 160/375 (42%), Gaps = 22/375 (5%)
Query: 202 PSTPNS--ASSSPGVAPADNTGPRAAPSSPSQL-CAVCGDTAACQHYGVRTCEGCKGFFK 258
P TP A ++PG A GP + S + C VCGD ++ +HYG TCEGCK FFK
Sbjct: 52 PQTPGQPGAPATPGTAGDKGQGPPGSGQSQQHIECVVCGDKSSGKHYGQFTCEGCKSFFK 111
Query: 259 RTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGR--LX 316
R+V++ Y C A ++CP+D CL VGM +E V+ + +
Sbjct: 112 RSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQPNPGQY 171
Query: 317 XXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFY 376
I+ L+RA + + SQ +P+ + M +
Sbjct: 172 ALTNGDPLNGHCYLSGYISLLLRAEPYPTSRYG----SQCMQPNNI---MGIENICELAA 224
Query: 377 SLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTR-LEDTKLTFCN 435
LL ++++ +A +P + DL D+ L ELFVL A + L L
Sbjct: 225 RLLFSAVE----WARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLHVAPLLAAA 280
Query: 436 GLVLDKRQCQR--SFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHR 492
GL R +F D + + L ++ +D + ++CL A+ L T D GL +
Sbjct: 281 GLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDAAH 340
Query: 493 VEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVP 552
+E LQ K L ++ F ++L LP LR++S ++++F ++L P
Sbjct: 341 IESLQEKSQCALEEYV--RSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTP 398
Query: 553 APPLIENMFRASLPF 567
LI +M + F
Sbjct: 399 IETLIRDMLLSGSSF 413
>BC017493-1|AAH17493.1| 423|Homo sapiens nuclear receptor subfamily
2, group F, member 1 protein.
Length = 423
Score = 116 bits (280), Expect = 2e-25
Identities = 100/375 (26%), Positives = 160/375 (42%), Gaps = 22/375 (5%)
Query: 202 PSTPNS--ASSSPGVAPADNTGPRAAPSSPSQL-CAVCGDTAACQHYGVRTCEGCKGFFK 258
P TP A ++PG A GP + S + C VCGD ++ +HYG TCEGCK FFK
Sbjct: 52 PQTPGQPGAPATPGTAGDKGQGPPGSGQSQQHIECVVCGDKSSGKHYGQFTCEGCKSFFK 111
Query: 259 RTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGR--LX 316
R+V++ Y C A ++CP+D CL VGM +E V+ + +
Sbjct: 112 RSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQPNPGQY 171
Query: 317 XXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFY 376
I+ L+RA + + SQ +P+ + M +
Sbjct: 172 ALTNGDPLNGHCYLSGYISLLLRAEPYPTSRYG----SQCMQPNNI---MGIENICELAA 224
Query: 377 SLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTR-LEDTKLTFCN 435
LL ++++ +A +P + DL D+ L ELFVL A + L L
Sbjct: 225 RLLFSAVE----WARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLHVAPLLAAA 280
Query: 436 GLVLDKRQCQR--SFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHR 492
GL R +F D + + L ++ +D + ++CL A+ L T D GL +
Sbjct: 281 GLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDAAH 340
Query: 493 VEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVP 552
+E LQ K L ++ F ++L LP LR++S ++++F ++L P
Sbjct: 341 IESLQEKSQCALEEYV--RSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTP 398
Query: 553 APPLIENMFRASLPF 567
LI +M + F
Sbjct: 399 IETLIRDMLLSGSSF 413
>BC004154-1|AAH04154.1| 423|Homo sapiens nuclear receptor subfamily
2, group F, member 1 protein.
Length = 423
Score = 116 bits (280), Expect = 2e-25
Identities = 100/375 (26%), Positives = 160/375 (42%), Gaps = 22/375 (5%)
Query: 202 PSTPNS--ASSSPGVAPADNTGPRAAPSSPSQL-CAVCGDTAACQHYGVRTCEGCKGFFK 258
P TP A ++PG A GP + S + C VCGD ++ +HYG TCEGCK FFK
Sbjct: 52 PQTPGQPGAPATPGTAGDKGQGPPGSGQSQQHIECVVCGDKSSGKHYGQFTCEGCKSFFK 111
Query: 259 RTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGR--LX 316
R+V++ Y C A ++CP+D CL VGM +E V+ + +
Sbjct: 112 RSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQPNPGQY 171
Query: 317 XXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFY 376
I+ L+RA + + SQ +P+ + M +
Sbjct: 172 ALTNGDPLNGHCYLSGYISLLLRAEPYPTSRYG----SQCMQPNNI---MGIENICELAA 224
Query: 377 SLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTR-LEDTKLTFCN 435
LL ++++ +A +P + DL D+ L ELFVL A + L L
Sbjct: 225 RLLFSAVE----WARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLHVAPLLAAA 280
Query: 436 GLVLDKRQCQR--SFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHR 492
GL R +F D + + L ++ +D + ++CL A+ L T D GL +
Sbjct: 281 GLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDAAH 340
Query: 493 VEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVP 552
+E LQ K L ++ F ++L LP LR++S ++++F ++L P
Sbjct: 341 IESLQEKSQCALEEYV--RSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTP 398
Query: 553 APPLIENMFRASLPF 567
LI +M + F
Sbjct: 399 IETLIRDMLLSGSSF 413
>X51416-1|CAA35778.1| 521|Homo sapiens protein ( Human mRNA for
steroid hormone receptor hERR1. ).
Length = 521
Score = 116 bits (278), Expect = 3e-25
Identities = 100/366 (27%), Positives = 149/366 (40%), Gaps = 13/366 (3%)
Query: 213 GVAPADNTGPRAAPSS-PSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLA 271
G P + G + SS P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A
Sbjct: 155 GAGPGEQGGGKLVLSSLPKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPA 214
Query: 272 EKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXX 331
C + CL VGM+KE VR D ++G R +
Sbjct: 215 SNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFP 274
Query: 332 XLITALVRAHVDT-SPDFANLDYSQYREPSPL----EP--PMSDLEVIHQFYSLLTTSID 384
A+ T +P A + + EP L +P P L + L I
Sbjct: 275 AGPLAVAGGPRKTAAPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIV 334
Query: 385 MIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQC 444
+ +A+ +PG+ L D+ + S +E+ VL +A R+ +L F LVLD+
Sbjct: 335 VTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGA 394
Query: 445 QRS-FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLITDR--HGLKEPHRVEQLQMKII 501
+ + G+ A+L L ++ ++ + L AL L H EP + +
Sbjct: 395 RAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDEPRLWSSCEKLLH 454
Query: 502 GCLRAHMPXXXXXXXXAP--HFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIEN 559
L + A R+L LP LR + + L + +KLE VP L
Sbjct: 455 EALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFLE 514
Query: 560 MFRASL 565
M A +
Sbjct: 515 MLEAMM 520
>U60477-1|AAB09475.1| 414|Homo sapiens apoliprotein AI regulatory
protein-1 protein.
Length = 414
Score = 113 bits (271), Expect = 2e-24
Identities = 107/406 (26%), Positives = 169/406 (41%), Gaps = 30/406 (7%)
Query: 178 VQRSESNSSNDSPKLHGTRVHCMQ-PSTPNSA--SSSPGVAPADNTGPRAAPSSPSQL-- 232
V S+ + ++ +P + G P TP +S+P A G P S Q
Sbjct: 15 VPGSQGSQASQAPPVPGPPPGAPHTPQTPGQGGPASTPAQTAAGGQGGPGGPGSDKQQQQ 74
Query: 233 ----CAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXX 288
C VCGD ++ +HYG TCEGCK FFKR+V++ Y C A ++CP+D
Sbjct: 75 QHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYC 134
Query: 289 XXXXCLAVGMVKEVV---RTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTS 345
CL VGM +E V R + G+ I+ L+RA +
Sbjct: 135 RLKKCLKVGMRREAVQRGRMPPTQPTHGQF-ALTNGDPLNCHSYLSGYISLLLRAEPYPT 193
Query: 346 PDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDRE 405
F SQ +P+ + M + +L ++++ +A +P + DL D+
Sbjct: 194 SRFG----SQCMQPNNI---MGIENICELAARMLFSAVE----WARNIPFFPDLQITDQV 242
Query: 406 QLFASARLELFVLRLAYRTR-LEDTKLTFCNGLVLDKRQCQR--SFGDWLHAVLDFSNTL 462
L ELFVL A + L L GL R +F D + + L
Sbjct: 243 ALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKL 302
Query: 463 HSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHF 521
++ +D + ++CL A+ L T D GL + VE LQ K L ++ F
Sbjct: 303 KALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQCALEEYV--RSQYPNQPTRF 360
Query: 522 SRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASLPF 567
++L LP LR++S ++++F ++L P LI +M + F
Sbjct: 361 GKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDMLLSGSSF 406
>M64497-1|AAA86429.1| 414|Homo sapiens apolipoprotein AI regulatory
protein-1 protein.
Length = 414
Score = 113 bits (271), Expect = 2e-24
Identities = 107/406 (26%), Positives = 169/406 (41%), Gaps = 30/406 (7%)
Query: 178 VQRSESNSSNDSPKLHGTRVHCMQ-PSTPNSA--SSSPGVAPADNTGPRAAPSSPSQL-- 232
V S+ + ++ +P + G P TP +S+P A G P S Q
Sbjct: 15 VPGSQGSQASQAPPVPGPPPGAPHTPQTPGQGGPASTPAQTAAGGQGGPGGPGSDKQQQQ 74
Query: 233 ----CAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXX 288
C VCGD ++ +HYG TCEGCK FFKR+V++ Y C A ++CP+D
Sbjct: 75 QHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYC 134
Query: 289 XXXXCLAVGMVKEVV---RTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTS 345
CL VGM +E V R + G+ I+ L+RA +
Sbjct: 135 RLKKCLKVGMRREAVQRGRMPPTQPTHGQF-ALTNGDPLNCHSYLSGYISLLLRAEPYPT 193
Query: 346 PDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDRE 405
F SQ +P+ + M + +L ++++ +A +P + DL D+
Sbjct: 194 SRFG----SQCMQPNNI---MGIENICELAARMLFSAVE----WARNIPFFPDLQITDQV 242
Query: 406 QLFASARLELFVLRLAYRTR-LEDTKLTFCNGLVLDKRQCQR--SFGDWLHAVLDFSNTL 462
L ELFVL A + L L GL R +F D + + L
Sbjct: 243 ALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKL 302
Query: 463 HSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHF 521
++ +D + ++CL A+ L T D GL + VE LQ K L ++ F
Sbjct: 303 KALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQCALEEYV--RSQYPNQPTRF 360
Query: 522 SRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASLPF 567
++L LP LR++S ++++F ++L P LI +M + F
Sbjct: 361 GKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDMLLSGSSF 406
>BC042897-1|AAH42897.1| 414|Homo sapiens nuclear receptor subfamily
2, group F, member 2 protein.
Length = 414
Score = 113 bits (271), Expect = 2e-24
Identities = 107/406 (26%), Positives = 169/406 (41%), Gaps = 30/406 (7%)
Query: 178 VQRSESNSSNDSPKLHGTRVHCMQ-PSTPNSA--SSSPGVAPADNTGPRAAPSSPSQL-- 232
V S+ + ++ +P + G P TP +S+P A G P S Q
Sbjct: 15 VPGSQGSQASQAPPVPGPPPGAPHTPQTPGQGGPASTPAQTAAGGQGGPGGPGSDKQQQQ 74
Query: 233 ----CAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXX 288
C VCGD ++ +HYG TCEGCK FFKR+V++ Y C A ++CP+D
Sbjct: 75 QHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYC 134
Query: 289 XXXXCLAVGMVKEVV---RTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTS 345
CL VGM +E V R + G+ I+ L+RA +
Sbjct: 135 RLKKCLKVGMRREAVQRGRMPPTQPTHGQF-ALTNGDPLNCHSYLSGYISLLLRAEPYPT 193
Query: 346 PDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDRE 405
F SQ +P+ + M + +L ++++ +A +P + DL D+
Sbjct: 194 SRFG----SQCMQPNNI---MGIENICELAARMLFSAVE----WARNIPFFPDLQITDQV 242
Query: 406 QLFASARLELFVLRLAYRTR-LEDTKLTFCNGLVLDKRQCQR--SFGDWLHAVLDFSNTL 462
L ELFVL A + L L GL R +F D + + L
Sbjct: 243 ALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKL 302
Query: 463 HSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHF 521
++ +D + ++CL A+ L T D GL + VE LQ K L ++ F
Sbjct: 303 KALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQCALEEYV--RSQYPNQPTRF 360
Query: 522 SRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASLPF 567
++L LP LR++S ++++F ++L P LI +M + F
Sbjct: 361 GKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDMLLSGSSF 406
>BC014664-1|AAH14664.1| 414|Homo sapiens nuclear receptor subfamily
2, group F, member 2 protein.
Length = 414
Score = 113 bits (271), Expect = 2e-24
Identities = 107/406 (26%), Positives = 169/406 (41%), Gaps = 30/406 (7%)
Query: 178 VQRSESNSSNDSPKLHGTRVHCMQ-PSTPNSA--SSSPGVAPADNTGPRAAPSSPSQL-- 232
V S+ + ++ +P + G P TP +S+P A G P S Q
Sbjct: 15 VPGSQGSQASQAPPVPGPPPGAPHTPQTPGQGGPASTPAQTAAGGQGGPGGPGSDKQQQQ 74
Query: 233 ----CAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXX 288
C VCGD ++ +HYG TCEGCK FFKR+V++ Y C A ++CP+D
Sbjct: 75 QHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYC 134
Query: 289 XXXXCLAVGMVKEVV---RTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTS 345
CL VGM +E V R + G+ I+ L+RA +
Sbjct: 135 RLKKCLKVGMRREAVQRGRMPPTQPTHGQF-ALTNGDPLNCHSYLSGYISLLLRAEPYPT 193
Query: 346 PDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDRE 405
F SQ +P+ + M + +L ++++ +A +P + DL D+
Sbjct: 194 SRFG----SQCMQPNNI---MGIENICELAARMLFSAVE----WARNIPFFPDLQITDQV 242
Query: 406 QLFASARLELFVLRLAYRTR-LEDTKLTFCNGLVLDKRQCQR--SFGDWLHAVLDFSNTL 462
L ELFVL A + L L GL R +F D + + L
Sbjct: 243 ALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKL 302
Query: 463 HSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHF 521
++ +D + ++CL A+ L T D GL + VE LQ K L ++ F
Sbjct: 303 KALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQCALEEYV--RSQYPNQPTRF 360
Query: 522 SRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASLPF 567
++L LP LR++S ++++F ++L P LI +M + F
Sbjct: 361 GKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDMLLSGSSF 406
>X63522-1|CAA45087.1| 533|Homo sapiens retinoic acid X receptor b
protein.
Length = 533
Score = 110 bits (264), Expect = 1e-23
Identities = 107/438 (24%), Positives = 178/438 (40%), Gaps = 40/438 (9%)
Query: 132 PPQPCSPTFDTVTPNQDSYSLPPFPSTVDLHISAEQAARQRRSSLPVQRSESNSSND-SP 190
PP P F ++ + S LPP P+ S ++ Q S++ + S D P
Sbjct: 125 PPPPLGSPFPVISSSMGSPGLPP-PAPPGF--SGPVSSPQINSTVSLPGGGSGPPEDVKP 181
Query: 191 KLHGTR-VHCMQPSTPNSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRT 249
+ G R +HC P PG P + +LCA+CGD ++ +HYGV +
Sbjct: 182 PVLGVRGLHCPPP---------PG-----------GPGAGKRLCAICGDRSSGKHYGVYS 221
Query: 250 CEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLK 309
CEGCKGFFKRT++K Y C K C VD CLA GM +E V+ + +
Sbjct: 222 CEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQR 281
Query: 310 GRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDL 369
G + + ++ A + + + SP +P +
Sbjct: 282 G-KDKDGDGEGAGGAPEEMPVDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNIC 340
Query: 370 EVI-HQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLED 428
+ Q ++L+ +A+++P + L +D+ L + EL + ++R+
Sbjct: 341 QAADKQLFTLVE--------WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVR 392
Query: 429 TKLTFCNGLVLDKRQCQRS-FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT-DRH 485
+ GL + + + G VL + + + M +D + CL A+ L D
Sbjct: 393 DGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAK 452
Query: 486 GLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSL 545
GL P VE L+ K+ L + F+++L LP LRS+ ++ L+ +F
Sbjct: 453 GLSNPSEVEVLREKVYASLETYCKQKYPEQQG--RFAKLLLRLPALRSIGLKCLEHLFFF 510
Query: 546 KLEDLVPAPPLIENMFRA 563
KL P + M A
Sbjct: 511 KLIGDTPIDTFLMEMLEA 528
>M84820-1|AAA60293.1| 533|Homo sapiens retinoid X receptor beta
protein.
Length = 533
Score = 110 bits (264), Expect = 1e-23
Identities = 107/438 (24%), Positives = 178/438 (40%), Gaps = 40/438 (9%)
Query: 132 PPQPCSPTFDTVTPNQDSYSLPPFPSTVDLHISAEQAARQRRSSLPVQRSESNSSND-SP 190
PP P F ++ + S LPP P+ S ++ Q S++ + S D P
Sbjct: 125 PPPPLGSPFPVISSSMGSPGLPP-PAPPGF--SGPVSSPQINSTVSLPGGGSGPPEDVKP 181
Query: 191 KLHGTR-VHCMQPSTPNSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRT 249
+ G R +HC P PG P + +LCA+CGD ++ +HYGV +
Sbjct: 182 PVLGVRGLHCPPP---------PG-----------GPGAGKRLCAICGDRSSGKHYGVYS 221
Query: 250 CEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLK 309
CEGCKGFFKRT++K Y C K C VD CLA GM +E V+ + +
Sbjct: 222 CEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQR 281
Query: 310 GRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDL 369
G + + ++ A + + + SP +P +
Sbjct: 282 G-KDKDGDGEGAGGAPEEMPVDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNIC 340
Query: 370 EVI-HQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLED 428
+ Q ++L+ +A+++P + L +D+ L + EL + ++R+
Sbjct: 341 QAADKQLFTLVE--------WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVR 392
Query: 429 TKLTFCNGLVLDKRQCQRS-FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT-DRH 485
+ GL + + + G VL + + + M +D + CL A+ L D
Sbjct: 393 DGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAK 452
Query: 486 GLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSL 545
GL P VE L+ K+ L + F+++L LP LRS+ ++ L+ +F
Sbjct: 453 GLSNPSEVEVLREKVYASLETYCKQKYPEQQG--RFAKLLLRLPALRSIGLKCLEHLFFF 510
Query: 546 KLEDLVPAPPLIENMFRA 563
KL P + M A
Sbjct: 511 KLIGDTPIDTFLMEMLEA 528
>BT007280-1|AAP35944.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 110 bits (264), Expect = 1e-23
Identities = 107/438 (24%), Positives = 178/438 (40%), Gaps = 40/438 (9%)
Query: 132 PPQPCSPTFDTVTPNQDSYSLPPFPSTVDLHISAEQAARQRRSSLPVQRSESNSSND-SP 190
PP P F ++ + S LPP P+ S ++ Q S++ + S D P
Sbjct: 125 PPPPLGSPFPVISSSMGSPGLPP-PAPPGF--SGPVSSPQINSTVSLPGGGSGPPEDVKP 181
Query: 191 KLHGTR-VHCMQPSTPNSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRT 249
+ G R +HC P PG P + +LCA+CGD ++ +HYGV +
Sbjct: 182 PVLGVRGLHCPPP---------PG-----------GPGAGKRLCAICGDRSSGKHYGVYS 221
Query: 250 CEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLK 309
CEGCKGFFKRT++K Y C K C VD CLA GM +E V+ + +
Sbjct: 222 CEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQR 281
Query: 310 GRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDL 369
G + + ++ A + + + SP +P +
Sbjct: 282 G-KDKDGDGEGAGGAPEEMPVDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNIC 340
Query: 370 EVI-HQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLED 428
+ Q ++L+ +A+++P + L +D+ L + EL + ++R+
Sbjct: 341 QAADKQLFTLVE--------WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVR 392
Query: 429 TKLTFCNGLVLDKRQCQRS-FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT-DRH 485
+ GL + + + G VL + + + M +D + CL A+ L D
Sbjct: 393 DGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAK 452
Query: 486 GLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSL 545
GL P VE L+ K+ L + F+++L LP LRS+ ++ L+ +F
Sbjct: 453 GLSNPSEVEVLREKVYASLETYCKQKYPEQQG--RFAKLLLRLPALRSIGLKCLEHLFFF 510
Query: 546 KLEDLVPAPPLIENMFRA 563
KL P + M A
Sbjct: 511 KLIGDTPIDTFLMEMLEA 528
>BC001167-1|AAH01167.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 110 bits (264), Expect = 1e-23
Identities = 107/438 (24%), Positives = 178/438 (40%), Gaps = 40/438 (9%)
Query: 132 PPQPCSPTFDTVTPNQDSYSLPPFPSTVDLHISAEQAARQRRSSLPVQRSESNSSND-SP 190
PP P F ++ + S LPP P+ S ++ Q S++ + S D P
Sbjct: 125 PPPPLGSPFPVISSSMGSPGLPP-PAPPGF--SGPVSSPQINSTVSLPGGGSGPPEDVKP 181
Query: 191 KLHGTR-VHCMQPSTPNSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRT 249
+ G R +HC P PG P + +LCA+CGD ++ +HYGV +
Sbjct: 182 PVLGVRGLHCPPP---------PG-----------GPGAGKRLCAICGDRSSGKHYGVYS 221
Query: 250 CEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLK 309
CEGCKGFFKRT++K Y C K C VD CLA GM +E V+ + +
Sbjct: 222 CEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQR 281
Query: 310 GRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDL 369
G + + ++ A + + + SP +P +
Sbjct: 282 G-KDKDGDGEGAGGAPEEMPVDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNIC 340
Query: 370 EVI-HQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLED 428
+ Q ++L+ +A+++P + L +D+ L + EL + ++R+
Sbjct: 341 QAADKQLFTLVE--------WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVR 392
Query: 429 TKLTFCNGLVLDKRQCQRS-FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT-DRH 485
+ GL + + + G VL + + + M +D + CL A+ L D
Sbjct: 393 DGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAK 452
Query: 486 GLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSL 545
GL P VE L+ K+ L + F+++L LP LRS+ ++ L+ +F
Sbjct: 453 GLSNPSEVEVLREKVYASLETYCKQKYPEQQG--RFAKLLLRLPALRSIGLKCLEHLFFF 510
Query: 546 KLEDLVPAPPLIENMFRA 563
KL P + M A
Sbjct: 511 KLIGDTPIDTFLMEMLEA 528
>AL844527-8|CAI41837.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 110 bits (264), Expect = 1e-23
Identities = 107/438 (24%), Positives = 178/438 (40%), Gaps = 40/438 (9%)
Query: 132 PPQPCSPTFDTVTPNQDSYSLPPFPSTVDLHISAEQAARQRRSSLPVQRSESNSSND-SP 190
PP P F ++ + S LPP P+ S ++ Q S++ + S D P
Sbjct: 125 PPPPLGSPFPVISSSMGSPGLPP-PAPPGF--SGPVSSPQINSTVSLPGGGSGPPEDVKP 181
Query: 191 KLHGTR-VHCMQPSTPNSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRT 249
+ G R +HC P PG P + +LCA+CGD ++ +HYGV +
Sbjct: 182 PVLGVRGLHCPPP---------PG-----------GPGAGKRLCAICGDRSSGKHYGVYS 221
Query: 250 CEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLK 309
CEGCKGFFKRT++K Y C K C VD CLA GM +E V+ + +
Sbjct: 222 CEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQR 281
Query: 310 GRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDL 369
G + + ++ A + + + SP +P +
Sbjct: 282 G-KDKDGDGEGAGGAPEEMPVDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNIC 340
Query: 370 EVI-HQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLED 428
+ Q ++L+ +A+++P + L +D+ L + EL + ++R+
Sbjct: 341 QAADKQLFTLVE--------WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVR 392
Query: 429 TKLTFCNGLVLDKRQCQRS-FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT-DRH 485
+ GL + + + G VL + + + M +D + CL A+ L D
Sbjct: 393 DGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAK 452
Query: 486 GLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSL 545
GL P VE L+ K+ L + F+++L LP LRS+ ++ L+ +F
Sbjct: 453 GLSNPSEVEVLREKVYASLETYCKQKYPEQQG--RFAKLLLRLPALRSIGLKCLEHLFFF 510
Query: 546 KLEDLVPAPPLIENMFRA 563
KL P + M A
Sbjct: 511 KLIGDTPIDTFLMEMLEA 528
>AL662824-20|CAI17614.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 110 bits (264), Expect = 1e-23
Identities = 107/438 (24%), Positives = 178/438 (40%), Gaps = 40/438 (9%)
Query: 132 PPQPCSPTFDTVTPNQDSYSLPPFPSTVDLHISAEQAARQRRSSLPVQRSESNSSND-SP 190
PP P F ++ + S LPP P+ S ++ Q S++ + S D P
Sbjct: 125 PPPPLGSPFPVISSSMGSPGLPP-PAPPGF--SGPVSSPQINSTVSLPGGGSGPPEDVKP 181
Query: 191 KLHGTR-VHCMQPSTPNSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRT 249
+ G R +HC P PG P + +LCA+CGD ++ +HYGV +
Sbjct: 182 PVLGVRGLHCPPP---------PG-----------GPGAGKRLCAICGDRSSGKHYGVYS 221
Query: 250 CEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLK 309
CEGCKGFFKRT++K Y C K C VD CLA GM +E V+ + +
Sbjct: 222 CEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQR 281
Query: 310 GRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDL 369
G + + ++ A + + + SP +P +
Sbjct: 282 G-KDKDGDGEGAGGAPEEMPVDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNIC 340
Query: 370 EVI-HQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLED 428
+ Q ++L+ +A+++P + L +D+ L + EL + ++R+
Sbjct: 341 QAADKQLFTLVE--------WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVR 392
Query: 429 TKLTFCNGLVLDKRQCQRS-FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT-DRH 485
+ GL + + + G VL + + + M +D + CL A+ L D
Sbjct: 393 DGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAK 452
Query: 486 GLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSL 545
GL P VE L+ K+ L + F+++L LP LRS+ ++ L+ +F
Sbjct: 453 GLSNPSEVEVLREKVYASLETYCKQKYPEQQG--RFAKLLLRLPALRSIGLKCLEHLFFF 510
Query: 546 KLEDLVPAPPLIENMFRA 563
KL P + M A
Sbjct: 511 KLIGDTPIDTFLMEMLEA 528
>AL645940-8|CAI18066.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 110 bits (264), Expect = 1e-23
Identities = 107/438 (24%), Positives = 178/438 (40%), Gaps = 40/438 (9%)
Query: 132 PPQPCSPTFDTVTPNQDSYSLPPFPSTVDLHISAEQAARQRRSSLPVQRSESNSSND-SP 190
PP P F ++ + S LPP P+ S ++ Q S++ + S D P
Sbjct: 125 PPPPLGSPFPVISSSMGSPGLPP-PAPPGF--SGPVSSPQINSTVSLPGGGSGPPEDVKP 181
Query: 191 KLHGTR-VHCMQPSTPNSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRT 249
+ G R +HC P PG P + +LCA+CGD ++ +HYGV +
Sbjct: 182 PVLGVRGLHCPPP---------PG-----------GPGAGKRLCAICGDRSSGKHYGVYS 221
Query: 250 CEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLK 309
CEGCKGFFKRT++K Y C K C VD CLA GM +E V+ + +
Sbjct: 222 CEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQR 281
Query: 310 GRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDL 369
G + + ++ A + + + SP +P +
Sbjct: 282 G-KDKDGDGEGAGGAPEEMPVDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNIC 340
Query: 370 EVI-HQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLED 428
+ Q ++L+ +A+++P + L +D+ L + EL + ++R+
Sbjct: 341 QAADKQLFTLVE--------WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVR 392
Query: 429 TKLTFCNGLVLDKRQCQRS-FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT-DRH 485
+ GL + + + G VL + + + M +D + CL A+ L D
Sbjct: 393 DGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAK 452
Query: 486 GLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSL 545
GL P VE L+ K+ L + F+++L LP LRS+ ++ L+ +F
Sbjct: 453 GLSNPSEVEVLREKVYASLETYCKQKYPEQQG--RFAKLLLRLPALRSIGLKCLEHLFFF 510
Query: 546 KLEDLVPAPPLIENMFRA 563
KL P + M A
Sbjct: 511 KLIGDTPIDTFLMEMLEA 528
>AL031228-14|CAI95622.1| 482|Homo sapiens retinoid X receptor, beta
protein.
Length = 482
Score = 110 bits (264), Expect = 1e-23
Identities = 107/438 (24%), Positives = 178/438 (40%), Gaps = 40/438 (9%)
Query: 132 PPQPCSPTFDTVTPNQDSYSLPPFPSTVDLHISAEQAARQRRSSLPVQRSESNSSND-SP 190
PP P F ++ + S LPP P+ S ++ Q S++ + S D P
Sbjct: 74 PPPPLGSPFPVISSSMGSPGLPP-PAPPGF--SGPVSSPQINSTVSLPGGGSGPPEDVKP 130
Query: 191 KLHGTR-VHCMQPSTPNSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRT 249
+ G R +HC P PG P + +LCA+CGD ++ +HYGV +
Sbjct: 131 PVLGVRGLHCPPP---------PG-----------GPGAGKRLCAICGDRSSGKHYGVYS 170
Query: 250 CEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLK 309
CEGCKGFFKRT++K Y C K C VD CLA GM +E V+ + +
Sbjct: 171 CEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQR 230
Query: 310 GRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDL 369
G + + ++ A + + + SP +P +
Sbjct: 231 G-KDKDGDGEGAGGAPEEMPVDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNIC 289
Query: 370 EVI-HQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLED 428
+ Q ++L+ +A+++P + L +D+ L + EL + ++R+
Sbjct: 290 QAADKQLFTLVE--------WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVR 341
Query: 429 TKLTFCNGLVLDKRQCQRS-FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT-DRH 485
+ GL + + + G VL + + + M +D + CL A+ L D
Sbjct: 342 DGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAK 401
Query: 486 GLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSL 545
GL P VE L+ K+ L + F+++L LP LRS+ ++ L+ +F
Sbjct: 402 GLSNPSEVEVLREKVYASLETYCKQKYPEQQG--RFAKLLLRLPALRSIGLKCLEHLFFF 459
Query: 546 KLEDLVPAPPLIENMFRA 563
KL P + M A
Sbjct: 460 KLIGDTPIDTFLMEMLEA 477
>AL031228-13|CAA20239.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 110 bits (264), Expect = 1e-23
Identities = 107/438 (24%), Positives = 178/438 (40%), Gaps = 40/438 (9%)
Query: 132 PPQPCSPTFDTVTPNQDSYSLPPFPSTVDLHISAEQAARQRRSSLPVQRSESNSSND-SP 190
PP P F ++ + S LPP P+ S ++ Q S++ + S D P
Sbjct: 125 PPPPLGSPFPVISSSMGSPGLPP-PAPPGF--SGPVSSPQINSTVSLPGGGSGPPEDVKP 181
Query: 191 KLHGTR-VHCMQPSTPNSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRT 249
+ G R +HC P PG P + +LCA+CGD ++ +HYGV +
Sbjct: 182 PVLGVRGLHCPPP---------PG-----------GPGAGKRLCAICGDRSSGKHYGVYS 221
Query: 250 CEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLK 309
CEGCKGFFKRT++K Y C K C VD CLA GM +E V+ + +
Sbjct: 222 CEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQR 281
Query: 310 GRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDL 369
G + + ++ A + + + SP +P +
Sbjct: 282 G-KDKDGDGEGAGGAPEEMPVDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNIC 340
Query: 370 EVI-HQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLED 428
+ Q ++L+ +A+++P + L +D+ L + EL + ++R+
Sbjct: 341 QAADKQLFTLVE--------WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVR 392
Query: 429 TKLTFCNGLVLDKRQCQRS-FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT-DRH 485
+ GL + + + G VL + + + M +D + CL A+ L D
Sbjct: 393 DGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAK 452
Query: 486 GLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSL 545
GL P VE L+ K+ L + F+++L LP LRS+ ++ L+ +F
Sbjct: 453 GLSNPSEVEVLREKVYASLETYCKQKYPEQQG--RFAKLLLRLPALRSIGLKCLEHLFFF 510
Query: 546 KLEDLVPAPPLIENMFRA 563
KL P + M A
Sbjct: 511 KLIGDTPIDTFLMEMLEA 528
>AF120161-1|AAD13794.1| 533|Homo sapiens retinoic X receptor beta
protein.
Length = 533
Score = 110 bits (264), Expect = 1e-23
Identities = 107/438 (24%), Positives = 178/438 (40%), Gaps = 40/438 (9%)
Query: 132 PPQPCSPTFDTVTPNQDSYSLPPFPSTVDLHISAEQAARQRRSSLPVQRSESNSSND-SP 190
PP P F ++ + S LPP P+ S ++ Q S++ + S D P
Sbjct: 125 PPPPLGSPFPVISSSMGSPGLPP-PAPPGF--SGPVSSPQINSTVSLPGGGSGPPEDVKP 181
Query: 191 KLHGTR-VHCMQPSTPNSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRT 249
+ G R +HC P PG P + +LCA+CGD ++ +HYGV +
Sbjct: 182 PVLGVRGLHCPPP---------PG-----------GPGAGKRLCAICGDRSSGKHYGVYS 221
Query: 250 CEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLK 309
CEGCKGFFKRT++K Y C K C VD CLA GM +E V+ + +
Sbjct: 222 CEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQR 281
Query: 310 GRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDL 369
G + + ++ A + + + SP +P +
Sbjct: 282 G-KDKDGDGEGAGGAPEEMPVDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNIC 340
Query: 370 EVI-HQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLED 428
+ Q ++L+ +A+++P + L +D+ L + EL + ++R+
Sbjct: 341 QAADKQLFTLVE--------WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVR 392
Query: 429 TKLTFCNGLVLDKRQCQRS-FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT-DRH 485
+ GL + + + G VL + + + M +D + CL A+ L D
Sbjct: 393 DGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAK 452
Query: 486 GLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSL 545
GL P VE L+ K+ L + F+++L LP LRS+ ++ L+ +F
Sbjct: 453 GLSNPSEVEVLREKVYASLETYCKQKYPEQQG--RFAKLLLRLPALRSIGLKCLEHLFFF 510
Query: 546 KLEDLVPAPPLIENMFRA 563
KL P + M A
Sbjct: 511 KLIGDTPIDTFLMEMLEA 528
>AF065396-1|AAC18599.1| 533|Homo sapiens retinoic X receptor B
protein.
Length = 533
Score = 110 bits (264), Expect = 1e-23
Identities = 107/438 (24%), Positives = 178/438 (40%), Gaps = 40/438 (9%)
Query: 132 PPQPCSPTFDTVTPNQDSYSLPPFPSTVDLHISAEQAARQRRSSLPVQRSESNSSND-SP 190
PP P F ++ + S LPP P+ S ++ Q S++ + S D P
Sbjct: 125 PPPPLGSPFPVISSSMGSPGLPP-PAPPGF--SGPVSSPQINSTVSLPGGGSGPPEDVKP 181
Query: 191 KLHGTR-VHCMQPSTPNSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRT 249
+ G R +HC P PG P + +LCA+CGD ++ +HYGV +
Sbjct: 182 PVLGVRGLHCPPP---------PG-----------GPGAGKRLCAICGDRSSGKHYGVYS 221
Query: 250 CEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLK 309
CEGCKGFFKRT++K Y C K C VD CLA GM +E V+ + +
Sbjct: 222 CEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQR 281
Query: 310 GRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDL 369
G + + ++ A + + + SP +P +
Sbjct: 282 G-KDKDGDGEGAGGAPEEMPVDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNIC 340
Query: 370 EVI-HQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLED 428
+ Q ++L+ +A+++P + L +D+ L + EL + ++R+
Sbjct: 341 QAADKQLFTLVE--------WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVR 392
Query: 429 TKLTFCNGLVLDKRQCQRS-FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT-DRH 485
+ GL + + + G VL + + + M +D + CL A+ L D
Sbjct: 393 DGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAK 452
Query: 486 GLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSL 545
GL P VE L+ K+ L + F+++L LP LRS+ ++ L+ +F
Sbjct: 453 GLSNPSEVEVLREKVYASLETYCKQKYPEQQG--RFAKLLLRLPALRSIGLKCLEHLFFF 510
Query: 546 KLEDLVPAPPLIENMFRA 563
KL P + M A
Sbjct: 511 KLIGDTPIDTFLMEMLEA 528
>BC041172-1|AAH41172.1| 402|Homo sapiens NR1H3 protein protein.
Length = 402
Score = 109 bits (263), Expect = 2e-23
Identities = 86/352 (24%), Positives = 161/352 (45%), Gaps = 23/352 (6%)
Query: 230 SQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXX 289
++LC+VCGD A+ HY V +CEGCKGFF+R+V KG+ Y+C + CP+D
Sbjct: 50 NELCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHSGGHCPMDTYMRRKCQECR 109
Query: 290 XXXCLAVGMVKEVVRTDS----LKGRRGRLXXXXXXXXXXXXXXXXXLITAL-------V 338
C GM +E V ++ K +R ++ L +
Sbjct: 110 LRKCRQAGMREECVLSEEQIRLKKLKRQEEEQAHATSLPPRASSPPQILPQLSPEQLGMI 169
Query: 339 RAHVDTSPDFANLDYSQYREPSP--LEPPMSDLEVIHQFYSLLT----TSIDMIKLFAEK 392
V +S +P + P E Q ++ T S+ I FA++
Sbjct: 170 EKLVAAQQQCNRRSFSDRLRVTPWPMAPDPHSREARQQRFAHFTELAIVSVQEIVDFAKQ 229
Query: 393 VPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRS--FGD 450
+PG+ L ED+ L ++ +E+ +L + R +TF ++ ++ +
Sbjct: 230 LPGFLQLSREDQIALLKTSAIEVMLLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVE 289
Query: 451 WLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMKIIGCLRAHMP 509
+++ + +FS ++ + ++ + FA L A+++ + DR +++ +VE+LQ + L A++
Sbjct: 290 FINPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVS 349
Query: 510 XXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMF 561
F R+L L LR+LS +++F+L+L+D PPL+ ++
Sbjct: 350 IHHPHDRLM--FPRMLMKLVSLRTLSSVHSEQVFALRLQD-KKLPPLLSEIW 398
>BC008218-1|AAH08218.1| 343|Homo sapiens ESRRG protein protein.
Length = 343
Score = 108 bits (260), Expect = 4e-23
Identities = 69/244 (28%), Positives = 110/244 (45%), Gaps = 5/244 (2%)
Query: 227 SSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXX 286
S P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 99 SMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQ 158
Query: 287 XXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSP 346
CL VGM+KE VR D ++G GR L+ + +
Sbjct: 159 ACRFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVS 216
Query: 347 DFANLDYSQ-YREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDRE 405
+ + Y P P P SD++ + L + +I +A+ +PG+ L D+
Sbjct: 217 HLLVAEPEKIYAMPDPTVPD-SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQM 275
Query: 406 QLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ-RSFGDWLHAVLDFSNTLHS 464
L SA +E+ +L + YR+ + +L + + ++D+ Q + D +A+L S
Sbjct: 276 SLLQSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKS 335
Query: 465 MDID 468
M ++
Sbjct: 336 MKLE 339
>AL844527-9|CAI41836.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 108 bits (260), Expect = 4e-23
Identities = 108/442 (24%), Positives = 179/442 (40%), Gaps = 44/442 (9%)
Query: 132 PPQPCSPTFDTVTPNQDSYSLPPFPSTVDLHISAEQAARQRRSSLPVQRSESNSSND-SP 190
PP P F ++ + S LPP P+ S ++ Q S++ + S D P
Sbjct: 125 PPPPLGSPFPVISSSMGSPGLPP-PAPPGF--SGPVSSPQINSTVSLPGGGSGPPEDVKP 181
Query: 191 KLHGTR-VHCMQPSTPNSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRT 249
+ G R +HC P PG P + +LCA+CGD ++ +HYGV +
Sbjct: 182 PVLGVRGLHCPPP---------PG-----------GPGAGKRLCAICGDRSSGKHYGVYS 221
Query: 250 CEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLK 309
CEGCKGFFKRT++K Y C K C VD CLA GM +E V+ + +
Sbjct: 222 CEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQR 281
Query: 310 GRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDL 369
G + + ++ A + + + SP +P +
Sbjct: 282 G-KDKDGDGEGAGGAPEEMPVDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNIC 340
Query: 370 EVI-HQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLED 428
+ Q ++L+ +A+++P + L +D+ L + EL + ++R+
Sbjct: 341 QAADKQLFTLVE--------WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVR 392
Query: 429 TKLTFCNGLVLDKRQCQRS-----FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT 482
+ GL + + + F L VL + + + M +D + CL A+ L
Sbjct: 393 DGILLATGLHVHRNSAHSAGVGAIFDRSLSRVLTELVSKMRDMRMDKTELGCLRAIILFN 452
Query: 483 -DRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQR 541
D GL P VE L+ K+ L + F+++L LP LRS+ ++ L+
Sbjct: 453 PDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQG--RFAKLLLRLPALRSIGLKCLEH 510
Query: 542 IFSLKLEDLVPAPPLIENMFRA 563
+F KL P + M A
Sbjct: 511 LFFFKLIGDTPIDTFLMEMLEA 532
>AL662824-21|CAI17612.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 108 bits (260), Expect = 4e-23
Identities = 108/442 (24%), Positives = 179/442 (40%), Gaps = 44/442 (9%)
Query: 132 PPQPCSPTFDTVTPNQDSYSLPPFPSTVDLHISAEQAARQRRSSLPVQRSESNSSND-SP 190
PP P F ++ + S LPP P+ S ++ Q S++ + S D P
Sbjct: 125 PPPPLGSPFPVISSSMGSPGLPP-PAPPGF--SGPVSSPQINSTVSLPGGGSGPPEDVKP 181
Query: 191 KLHGTR-VHCMQPSTPNSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRT 249
+ G R +HC P PG P + +LCA+CGD ++ +HYGV +
Sbjct: 182 PVLGVRGLHCPPP---------PG-----------GPGAGKRLCAICGDRSSGKHYGVYS 221
Query: 250 CEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLK 309
CEGCKGFFKRT++K Y C K C VD CLA GM +E V+ + +
Sbjct: 222 CEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQR 281
Query: 310 GRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDL 369
G + + ++ A + + + SP +P +
Sbjct: 282 G-KDKDGDGEGAGGAPEEMPVDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNIC 340
Query: 370 EVI-HQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLED 428
+ Q ++L+ +A+++P + L +D+ L + EL + ++R+
Sbjct: 341 QAADKQLFTLVE--------WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVR 392
Query: 429 TKLTFCNGLVLDKRQCQRS-----FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT 482
+ GL + + + F L VL + + + M +D + CL A+ L
Sbjct: 393 DGILLATGLHVHRNSAHSAGVGAIFDRSLSRVLTELVSKMRDMRMDKTELGCLRAIILFN 452
Query: 483 -DRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQR 541
D GL P VE L+ K+ L + F+++L LP LRS+ ++ L+
Sbjct: 453 PDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQG--RFAKLLLRLPALRSIGLKCLEH 510
Query: 542 IFSLKLEDLVPAPPLIENMFRA 563
+F KL P + M A
Sbjct: 511 LFFFKLIGDTPIDTFLMEMLEA 532
>AL645940-7|CAI18064.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 108 bits (260), Expect = 4e-23
Identities = 108/442 (24%), Positives = 179/442 (40%), Gaps = 44/442 (9%)
Query: 132 PPQPCSPTFDTVTPNQDSYSLPPFPSTVDLHISAEQAARQRRSSLPVQRSESNSSND-SP 190
PP P F ++ + S LPP P+ S ++ Q S++ + S D P
Sbjct: 125 PPPPLGSPFPVISSSMGSPGLPP-PAPPGF--SGPVSSPQINSTVSLPGGGSGPPEDVKP 181
Query: 191 KLHGTR-VHCMQPSTPNSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRT 249
+ G R +HC P PG P + +LCA+CGD ++ +HYGV +
Sbjct: 182 PVLGVRGLHCPPP---------PG-----------GPGAGKRLCAICGDRSSGKHYGVYS 221
Query: 250 CEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLK 309
CEGCKGFFKRT++K Y C K C VD CLA GM +E V+ + +
Sbjct: 222 CEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQR 281
Query: 310 GRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDL 369
G + + ++ A + + + SP +P +
Sbjct: 282 G-KDKDGDGEGAGGAPEEMPVDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNIC 340
Query: 370 EVI-HQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLED 428
+ Q ++L+ +A+++P + L +D+ L + EL + ++R+
Sbjct: 341 QAADKQLFTLVE--------WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVR 392
Query: 429 TKLTFCNGLVLDKRQCQRS-----FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT 482
+ GL + + + F L VL + + + M +D + CL A+ L
Sbjct: 393 DGILLATGLHVHRNSAHSAGVGAIFDRSLSRVLTELVSKMRDMRMDKTELGCLRAIILFN 452
Query: 483 -DRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQR 541
D GL P VE L+ K+ L + F+++L LP LRS+ ++ L+
Sbjct: 453 PDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQG--RFAKLLLRLPALRSIGLKCLEH 510
Query: 542 IFSLKLEDLVPAPPLIENMFRA 563
+F KL P + M A
Sbjct: 511 LFFFKLIGDTPIDTFLMEMLEA 532
>AB209244-1|BAD92481.1| 577|Homo sapiens retinoid X receptor, beta
variant protein.
Length = 577
Score = 108 bits (260), Expect = 4e-23
Identities = 108/442 (24%), Positives = 179/442 (40%), Gaps = 44/442 (9%)
Query: 132 PPQPCSPTFDTVTPNQDSYSLPPFPSTVDLHISAEQAARQRRSSLPVQRSESNSSND-SP 190
PP P F ++ + S LPP P+ S ++ Q S++ + S D P
Sbjct: 165 PPPPLGSPFPVISSSMGSPGLPP-PAPPGF--SGPVSSPQINSTVSLPGGGSGPPEDVKP 221
Query: 191 KLHGTR-VHCMQPSTPNSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRT 249
+ G R +HC P PG P + +LCA+CGD ++ +HYGV +
Sbjct: 222 PVLGVRGLHCPPP---------PG-----------GPGAGKRLCAICGDRSSGKHYGVYS 261
Query: 250 CEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLK 309
CEGCKGFFKRT++K Y C K C VD CLA GM +E V+ + +
Sbjct: 262 CEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQR 321
Query: 310 GRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDL 369
G + + ++ A + + + SP +P +
Sbjct: 322 G-KDKDGDGEGAGGAPEEMPVDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNIC 380
Query: 370 EVI-HQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLED 428
+ Q ++L+ +A+++P + L +D+ L + EL + ++R+
Sbjct: 381 QAADKQLFTLVE--------WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVR 432
Query: 429 TKLTFCNGLVLDKRQCQRS-----FGDWLHAVL-DFSNTLHSMDIDISTFACLCALTLIT 482
+ GL + + + F L VL + + + M +D + CL A+ L
Sbjct: 433 DGILLATGLHVHRNSAHSAGVGAIFDRSLSRVLTELVSKMRDMRMDKTELGCLRAIILFN 492
Query: 483 -DRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQR 541
D GL P VE L+ K+ L + F+++L LP LRS+ ++ L+
Sbjct: 493 PDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQG--RFAKLLLRLPALRSIGLKCLEH 550
Query: 542 IFSLKLEDLVPAPPLIENMFRA 563
+F KL P + M A
Sbjct: 551 LFFFKLIGDTPIDTFLMEMLEA 572
>X04707-1|CAA28412.1| 456|Homo sapiens put.thyroid hormone receptor
protein.
Length = 456
Score = 105 bits (251), Expect = 6e-22
Identities = 101/358 (28%), Positives = 145/358 (40%), Gaps = 30/358 (8%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLAEKSCPVDXXXXXXXXXX 288
+LC VCGD A HY TCEGCKGFF+RT+QK Y C E C +D
Sbjct: 100 ELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQEC 159
Query: 289 XXXXCLAVGMVKEVVRTDSLK------------GRRGRLXXXXXXXXXXXXXXXXXLITA 336
C+ VGM ++V DS + RR LI
Sbjct: 160 RFKKCIYVGMATDLVLDDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKT 219
Query: 337 LVRAHVDTS---------PDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIK 387
+ AHV T+ P F D Q + E DLE F ++T +I +
Sbjct: 220 VTEAHVATNAQGSHWKQKPKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVV 279
Query: 388 LFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR- 446
FA+K+P + +L ED+ L +E+ LR A R E LT + + + Q +
Sbjct: 280 DFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVIRGQLKNG 339
Query: 447 SFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLR 505
G A+ D +L S ++D + A L A+ L+ +DR GL R+E+ Q L
Sbjct: 340 GLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSF---LL 396
Query: 506 AHMPXXXXXXXXAPHF-SRVLGALPELRSLSVQGLQRIFSLKLE-DLVPAPPLIENMF 561
A HF ++L + +LR + R +K+E PPL +F
Sbjct: 397 AFEHYINYRKHHVTHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELLPPLFLEVF 454
>M26747-1|AAA35677.1| 456|Homo sapiens c-erbA protein.
Length = 456
Score = 105 bits (251), Expect = 6e-22
Identities = 101/358 (28%), Positives = 145/358 (40%), Gaps = 30/358 (8%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLAEKSCPVDXXXXXXXXXX 288
+LC VCGD A HY TCEGCKGFF+RT+QK Y C E C +D
Sbjct: 100 ELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQEC 159
Query: 289 XXXXCLAVGMVKEVVRTDSLK------------GRRGRLXXXXXXXXXXXXXXXXXLITA 336
C+ VGM ++V DS + RR LI
Sbjct: 160 RFKKCIYVGMATDLVLDDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKT 219
Query: 337 LVRAHVDTS---------PDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIK 387
+ AHV T+ P F D Q + E DLE F ++T +I +
Sbjct: 220 VTEAHVATNAQGSHWKQKPKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVV 279
Query: 388 LFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR- 446
FA+K+P + +L ED+ L +E+ LR A R E LT + + + Q +
Sbjct: 280 DFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVIRGQLKNG 339
Query: 447 SFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLR 505
G A+ D +L S ++D + A L A+ L+ +DR GL R+E+ Q L
Sbjct: 340 GLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSF---LL 396
Query: 506 AHMPXXXXXXXXAPHF-SRVLGALPELRSLSVQGLQRIFSLKLE-DLVPAPPLIENMF 561
A HF ++L + +LR + R +K+E PPL +F
Sbjct: 397 AFEHYINYRKHHVTHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELLPPLFLEVF 454
>BC106930-1|AAI06931.1| 461|Homo sapiens THRB protein protein.
Length = 461
Score = 103 bits (246), Expect = 2e-21
Identities = 100/358 (27%), Positives = 144/358 (40%), Gaps = 30/358 (8%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLAEKSCPVDXXXXXXXXXX 288
+LC VCGD A HY TCEGCKGFF+RT+QK Y C E C +D
Sbjct: 105 ELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQEC 164
Query: 289 XXXXCLAVGMVKEVVRTDSLK------------GRRGRLXXXXXXXXXXXXXXXXXLITA 336
C+ VGM ++V DS + RR LI
Sbjct: 165 RFKKCIYVGMATDLVLDDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKT 224
Query: 337 LVRAHVDTSPD---------FANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIK 387
+ AHV T+ F D Q + E DLE F ++T +I +
Sbjct: 225 VTEAHVATNAQGSHWKQKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVV 284
Query: 388 LFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR- 446
FA+K+P + +L ED+ L +E+ LR A R E LT + + + Q +
Sbjct: 285 DFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNG 344
Query: 447 SFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLR 505
G A+ D +L S ++D + A L A+ L+ +DR GL R+E+ Q L
Sbjct: 345 GLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSF---LL 401
Query: 506 AHMPXXXXXXXXAPHF-SRVLGALPELRSLSVQGLQRIFSLKLEDLVPA-PPLIENMF 561
A HF ++L + +LR + R +K+E PPL +F
Sbjct: 402 AFEHYINYRKHHVTHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVF 459
>BC106929-1|AAI06930.1| 461|Homo sapiens thyroid hormone receptor,
beta (erythroblastic leukemia viral (v-erb-a) oncogen
protein.
Length = 461
Score = 103 bits (246), Expect = 2e-21
Identities = 100/358 (27%), Positives = 144/358 (40%), Gaps = 30/358 (8%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLAEKSCPVDXXXXXXXXXX 288
+LC VCGD A HY TCEGCKGFF+RT+QK Y C E C +D
Sbjct: 105 ELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQEC 164
Query: 289 XXXXCLAVGMVKEVVRTDSLK------------GRRGRLXXXXXXXXXXXXXXXXXLITA 336
C+ VGM ++V DS + RR LI
Sbjct: 165 RFKKCIYVGMATDLVLDDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKT 224
Query: 337 LVRAHVDTSPD---------FANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIK 387
+ AHV T+ F D Q + E DLE F ++T +I +
Sbjct: 225 VTEAHVATNAQGSHWKQKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVV 284
Query: 388 LFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR- 446
FA+K+P + +L ED+ L +E+ LR A R E LT + + + Q +
Sbjct: 285 DFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNG 344
Query: 447 SFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLR 505
G A+ D +L S ++D + A L A+ L+ +DR GL R+E+ Q L
Sbjct: 345 GLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSF---LL 401
Query: 506 AHMPXXXXXXXXAPHF-SRVLGALPELRSLSVQGLQRIFSLKLEDLVPA-PPLIENMF 561
A HF ++L + +LR + R +K+E PPL +F
Sbjct: 402 AFEHYINYRKHHVTHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVF 459
>X55005-1|CAA38749.1| 410|Homo sapiens thyriod hormone receptor
alpha 1, THRA1 protein.
Length = 410
Score = 100 bits (240), Expect = 1e-20
Identities = 109/404 (26%), Positives = 164/404 (40%), Gaps = 41/404 (10%)
Query: 195 TRVHCMQPSTPNSASSSPGVAPADNTGPRAAPSS-----PSQL-----CAVCGDTAACQH 244
++V C NSA S G N G + +S PS L C VCGD A H
Sbjct: 6 SKVECGSDPEENSARSPDGKRKRKN-GQCSLKTSMSGYIPSYLDKDEQCVVCGDKATGYH 64
Query: 245 YGVRTCEGCKGFFKRTVQKG--SKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEV 302
Y TCEGCKGFF+RT+QK Y C + C +D C+AVGM ++
Sbjct: 65 YRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKITRNQCQLCRFKKCIAVGMAMDL 124
Query: 303 VRTDSLKGRRGRLXXXXXXXXXXXXXXXX------------XLITALVRAHVDTSPDFAN 350
V DS + + +L LI AH T+ ++
Sbjct: 125 VLDDSKRVAKRKLIEQNRERRRKEEMIRSLQQRPEPTPEEWDLIHIATEAHRSTNAQGSH 184
Query: 351 LDYSQYREP-----SPL-EPPMSD---LEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCP 401
+ P SP+ P D LE +F ++T +I + FA+K+P + +L
Sbjct: 185 WKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPC 244
Query: 402 EDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR-SFGDWLHAVLDFSN 460
ED+ L +E+ LR A R E LT + + + Q + G A+ +
Sbjct: 245 EDQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIFELGK 304
Query: 461 TLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAP 519
+L + ++D + A L A+ L+ TDR GL ++E+ Q L A P
Sbjct: 305 SLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQE---AYLLAFEHYVNHRKHNIP 361
Query: 520 HF-SRVLGALPELRSLSVQGLQRIFSLKLEDLVPA-PPLIENMF 561
HF ++L + +LR + R +K+E PPL +F
Sbjct: 362 HFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVF 405
>M24748-2|AAA66021.1| 410|Homo sapiens thyroid receptor alpha-1
protein.
Length = 410
Score = 100 bits (240), Expect = 1e-20
Identities = 109/404 (26%), Positives = 164/404 (40%), Gaps = 41/404 (10%)
Query: 195 TRVHCMQPSTPNSASSSPGVAPADNTGPRAAPSS-----PSQL-----CAVCGDTAACQH 244
++V C NSA S G N G + +S PS L C VCGD A H
Sbjct: 6 SKVECGSDPEENSARSPDGKRKRKN-GQCSLKTSMSGYIPSYLDKDEQCVVCGDKATGYH 64
Query: 245 YGVRTCEGCKGFFKRTVQKG--SKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEV 302
Y TCEGCKGFF+RT+QK Y C + C +D C+AVGM ++
Sbjct: 65 YRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKITRNQCQLCRFKKCIAVGMAMDL 124
Query: 303 VRTDSLKGRRGRLXXXXXXXXXXXXXXXX------------XLITALVRAHVDTSPDFAN 350
V DS + + +L LI AH T+ ++
Sbjct: 125 VLDDSKRVAKRKLIEQNRERRRKEEMIRSLQQRPEPTPEEWDLIHIATEAHRSTNAQGSH 184
Query: 351 LDYSQYREP-----SPL-EPPMSD---LEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCP 401
+ P SP+ P D LE +F ++T +I + FA+K+P + +L
Sbjct: 185 WKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPC 244
Query: 402 EDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR-SFGDWLHAVLDFSN 460
ED+ L +E+ LR A R E LT + + + Q + G A+ +
Sbjct: 245 EDQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIFELGK 304
Query: 461 TLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAP 519
+L + ++D + A L A+ L+ TDR GL ++E+ Q L A P
Sbjct: 305 SLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQE---AYLLAFEHYVNHRKHNIP 361
Query: 520 HF-SRVLGALPELRSLSVQGLQRIFSLKLEDLVPA-PPLIENMF 561
HF ++L + +LR + R +K+E PPL +F
Sbjct: 362 HFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVF 405
>CR541915-1|CAG46713.1| 410|Homo sapiens THRA protein.
Length = 410
Score = 100 bits (240), Expect = 1e-20
Identities = 109/404 (26%), Positives = 164/404 (40%), Gaps = 41/404 (10%)
Query: 195 TRVHCMQPSTPNSASSSPGVAPADNTGPRAAPSS-----PSQL-----CAVCGDTAACQH 244
++V C NSA S G N G + +S PS L C VCGD A H
Sbjct: 6 SKVECGSDPEENSARSPDGKRKRKN-GQCSLKTSMSGYIPSYLDKDEQCVVCGDKATGYH 64
Query: 245 YGVRTCEGCKGFFKRTVQKG--SKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEV 302
Y TCEGCKGFF+RT+QK Y C + C +D C+AVGM ++
Sbjct: 65 YRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKITRNQCQLCRFKKCIAVGMAMDL 124
Query: 303 VRTDSLKGRRGRLXXXXXXXXXXXXXXXX------------XLITALVRAHVDTSPDFAN 350
V DS + + +L LI AH T+ ++
Sbjct: 125 VLDDSKRVAKRKLIEQNRERRRKEEMIRSLQQRPEPTPEEWDLIHIATEAHRSTNAQGSH 184
Query: 351 LDYSQYREP-----SPL-EPPMSD---LEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCP 401
+ P SP+ P D LE +F ++T +I + FA+K+P + +L
Sbjct: 185 WKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPC 244
Query: 402 EDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR-SFGDWLHAVLDFSN 460
ED+ L +E+ LR A R E LT + + + Q + G A+ +
Sbjct: 245 EDQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIFELGK 304
Query: 461 TLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAP 519
+L + ++D + A L A+ L+ TDR GL ++E+ Q L A P
Sbjct: 305 SLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQE---AYLLAFEHYVNHRKHNIP 361
Query: 520 HF-SRVLGALPELRSLSVQGLQRIFSLKLEDLVPA-PPLIENMF 561
HF ++L + +LR + R +K+E PPL +F
Sbjct: 362 HFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVF 405
>BC008851-1|AAH08851.1| 410|Homo sapiens THRA protein protein.
Length = 410
Score = 100 bits (240), Expect = 1e-20
Identities = 109/404 (26%), Positives = 164/404 (40%), Gaps = 41/404 (10%)
Query: 195 TRVHCMQPSTPNSASSSPGVAPADNTGPRAAPSS-----PSQL-----CAVCGDTAACQH 244
++V C NSA S G N G + +S PS L C VCGD A H
Sbjct: 6 SKVECGSDPEENSARSPDGKRKRKN-GQCSLKTSMSGYIPSYLDKDEQCVVCGDKATGYH 64
Query: 245 YGVRTCEGCKGFFKRTVQKG--SKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEV 302
Y TCEGCKGFF+RT+QK Y C + C +D C+AVGM ++
Sbjct: 65 YRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKITRNQCQLCRFKKCIAVGMAMDL 124
Query: 303 VRTDSLKGRRGRLXXXXXXXXXXXXXXXX------------XLITALVRAHVDTSPDFAN 350
V DS + + +L LI AH T+ ++
Sbjct: 125 VLDDSKRVAKRKLIEQNRERRRKEEMIRSLQQRPEPTPEEWDLIHIATEAHRSTNAQGSH 184
Query: 351 LDYSQYREP-----SPL-EPPMSD---LEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCP 401
+ P SP+ P D LE +F ++T +I + FA+K+P + +L
Sbjct: 185 WKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPC 244
Query: 402 EDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR-SFGDWLHAVLDFSN 460
ED+ L +E+ LR A R E LT + + + Q + G A+ +
Sbjct: 245 EDQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIFELGK 304
Query: 461 TLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAP 519
+L + ++D + A L A+ L+ TDR GL ++E+ Q L A P
Sbjct: 305 SLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQE---AYLLAFEHYVNHRKHNIP 361
Query: 520 HF-SRVLGALPELRSLSVQGLQRIFSLKLEDLVPA-PPLIENMF 561
HF ++L + +LR + R +K+E PPL +F
Sbjct: 362 HFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVF 405
>X55074-1|CAA38899.1| 410|Homo sapiens thyroid hormone receptor
alpha 1 protein.
Length = 410
Score = 100 bits (239), Expect = 2e-20
Identities = 109/404 (26%), Positives = 164/404 (40%), Gaps = 41/404 (10%)
Query: 195 TRVHCMQPSTPNSASSSPGVAPADNTGPRAAPSS-----PSQL-----CAVCGDTAACQH 244
++V C NSA S G N G + +S PS L C VCGD A H
Sbjct: 6 SKVECGSDPEENSARSPDGKRKRKN-GQCSLKTSMSGYIPSYLDKDEQCVVCGDKATGYH 64
Query: 245 YGVRTCEGCKGFFKRTVQKG--SKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEV 302
Y TCEGCKGFF+RT+QK Y C + C +D C+AVGM ++
Sbjct: 65 YRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKITRNQCQLCRFKKCIAVGMAMDL 124
Query: 303 VRTDSLKGRRGRLXXXXXXXXXXXXXXXX------------XLITALVRAHVDTSPDFAN 350
V DS + + +L LI AH T+ ++
Sbjct: 125 VLDDSKRVAKRKLIEQNRERRRKEEMIRSLQQRPEPTPEEWDLIHIATEAHRSTNAQGSH 184
Query: 351 LDYSQYREP-----SPL-EPPMSD---LEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCP 401
+ P SP+ P D LE +F ++T +I + FA+K+P + +L
Sbjct: 185 WKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPC 244
Query: 402 EDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR-SFGDWLHAVLDFSN 460
ED+ L +E+ LR A R E LT + + + Q + G A+ +
Sbjct: 245 EDQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKRAQLKNGGLGVVSDAIFELGK 304
Query: 461 TLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAP 519
+L + ++D + A L A+ L+ TDR GL ++E+ Q L A P
Sbjct: 305 SLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQE---AYLLAFEHYVNHRKHNIP 361
Query: 520 HF-SRVLGALPELRSLSVQGLQRIFSLKLEDLVPA-PPLIENMF 561
HF ++L + +LR + R +K+E PPL +F
Sbjct: 362 HFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVF 405
>AB209346-1|BAD92583.1| 397|Homo sapiens thyroid hormone receptor,
alpha isoform 1 variant protein.
Length = 397
Score = 100 bits (239), Expect = 2e-20
Identities = 96/356 (26%), Positives = 147/356 (41%), Gaps = 30/356 (8%)
Query: 233 CAVCGDTAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLAEKSCPVDXXXXXXXXXXXX 290
C VCGD A HY TCEGCKGFF+RT+QK Y C + C +D
Sbjct: 40 CVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKITRNQCQLCRF 99
Query: 291 XXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXX------------XLITALV 338
C+AVGM ++V DS + + +L LI
Sbjct: 100 KKCIAVGMAMDLVLDDSKRVAKRKLIEQNRERRRKEEMIRSLQQRPEPTPEEWDLIHIAT 159
Query: 339 RAHVDTSPDFANLDYSQYREP-----SPL-EPPMSD---LEVIHQFYSLLTTSIDMIKLF 389
AH T+ ++ + P SP+ P D LE +F ++T +I + F
Sbjct: 160 EAHRSTNAQGSHWKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPAITRVVDF 219
Query: 390 AEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR-SF 448
A+K+P + +L ED+ L +E+ LR A R E LT + + + Q +
Sbjct: 220 AKKLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGL 279
Query: 449 GDWLHAVLDFSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAH 507
G A+ + +L + ++D + A L A+ L+ TDR GL ++E+ Q L A
Sbjct: 280 GVVSDAIFELGKSLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQE---AYLLAF 336
Query: 508 MPXXXXXXXXAPHF-SRVLGALPELRSLSVQGLQRIFSLKLEDLVPA-PPLIENMF 561
PHF ++L + +LR + R +K+E PPL +F
Sbjct: 337 EHYVNHRKHNIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVF 392
>Z49826-1|CAA89990.2| 408|Homo sapiens hepatocyte nuclear factor 4
gamma (HNF4gamma) protein.
Length = 408
Score = 99 bits (238), Expect = 2e-20
Identities = 79/332 (23%), Positives = 141/332 (42%), Gaps = 21/332 (6%)
Query: 232 LCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXX 291
LCA+CGD A +HYG TC+GCKGFF+R+++K Y C + C VD
Sbjct: 11 LCAICGDRATGKHYGASTCDGCKGFFRRSIRKSHIYSCRFSRQCVVDKDKRNQCRYCRLR 70
Query: 292 XCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRA-HVDTSPDFAN 350
C GM KE V+ + R R+ L A VR+ + S ++
Sbjct: 71 KCFRAGMKKEAVQNE-----RDRISTRRSTFDGSNIPSINTLAQAEVRSRQISVSSPGSS 125
Query: 351 LDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFAS 410
D + + + I + + ++ +A+ +P + +L +D+ L +
Sbjct: 126 TDIN-----------VKKIASIGDVCESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRA 174
Query: 411 ARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRSFGDWLHAVLD-FSNTLHSMDIDI 469
E +L R+ + L N V+ + C+ + VLD + ID
Sbjct: 175 HAGEHLLLGATKRSMMYKDILLLGNNYVIHRNSCEVEISRVANRVLDELVRPFQEIQIDD 234
Query: 470 STFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGAL 528
+ +ACL A+ D GL +P +++ ++ ++ L ++ F +L L
Sbjct: 235 NEYACLKAIVFFDPDAKGLSDPVKIKNMRFQVQIGLEDYI--NDRQYDSRGRFGELLLLL 292
Query: 529 PELRSLSVQGLQRIFSLKLEDLVPAPPLIENM 560
P L+S++ Q +++I +KL +V L++ M
Sbjct: 293 PTLQSITWQMIEQIQFVKLFGMVKIDNLLQEM 324
>AF133504-1|AAF00110.1| 408|Homo sapiens hepatocyte nuclear factor
4 gamma protein.
Length = 408
Score = 99 bits (238), Expect = 2e-20
Identities = 79/332 (23%), Positives = 141/332 (42%), Gaps = 21/332 (6%)
Query: 232 LCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXX 291
LCA+CGD A +HYG TC+GCKGFF+R+++K Y C + C VD
Sbjct: 11 LCAICGDRATGKHYGASTCDGCKGFFRRSIRKSHIYSCRFSRQCVVDKDKRNQCRYCRLR 70
Query: 292 XCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRA-HVDTSPDFAN 350
C GM KE V+ + R R+ L A VR+ + S ++
Sbjct: 71 KCFRAGMKKEAVQNE-----RDRISTRRSTFDGSNIPSINTLAQAEVRSRQISVSSPGSS 125
Query: 351 LDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFAS 410
D + + + I + + ++ +A+ +P + +L +D+ L +
Sbjct: 126 TDIN-----------VKKIASIGDVCESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRA 174
Query: 411 ARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRSFGDWLHAVLD-FSNTLHSMDIDI 469
E +L R+ + L N V+ + C+ + VLD + ID
Sbjct: 175 HAGEHLLLGATKRSMIYKDILLLGNNYVIHRNSCEVEISRVANRVLDELVRPFQEIQIDD 234
Query: 470 STFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGAL 528
+ +ACL A+ D GL +P +++ ++ ++ L ++ F +L L
Sbjct: 235 NEYACLKAIVFFDPDAKGLSDPVKIKNMRFQVQIGLEDYI--NDRQYDSRGRFGELLLLL 292
Query: 529 PELRSLSVQGLQRIFSLKLEDLVPAPPLIENM 560
P L+S++ Q +++I +KL +V L++ M
Sbjct: 293 PTLQSITWQMIEQIQFVKLFGMVKIDNLLQEM 324
>BC105011-1|AAI05012.1| 408|Homo sapiens HNF4G protein protein.
Length = 408
Score = 98.7 bits (235), Expect = 5e-20
Identities = 78/332 (23%), Positives = 141/332 (42%), Gaps = 21/332 (6%)
Query: 232 LCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXX 291
LCA+CGD A +HYG +C+GCKGFF+R+++K Y C + C VD
Sbjct: 11 LCAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSCRFSRQCVVDKDKRNQCRYCRLR 70
Query: 292 XCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRA-HVDTSPDFAN 350
C GM KE V+ + R R+ L A VR+ + S ++
Sbjct: 71 KCFRAGMKKEAVQNE-----RDRISTRRSTFDGSNIPSINTLAQAEVRSRQISVSSPGSS 125
Query: 351 LDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFAS 410
D + + + I + + ++ +A+ +P + +L +D+ L +
Sbjct: 126 TDIN-----------VKKIASIGDVCESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRA 174
Query: 411 ARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRSFGDWLHAVLD-FSNTLHSMDIDI 469
E +L R+ + L N V+ + C+ + VLD + ID
Sbjct: 175 HAGEHLLLGATKRSMMYKDILLLGNNYVIHRNSCEVEISRVANRVLDELVRPFQEIQIDD 234
Query: 470 STFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGAL 528
+ +ACL A+ D GL +P +++ ++ ++ L ++ F +L L
Sbjct: 235 NEYACLKAIVFFDPDAKGLSDPVKIKNMRFQVQIGLEDYI--NDRQYDSRGRFGELLLLL 292
Query: 529 PELRSLSVQGLQRIFSLKLEDLVPAPPLIENM 560
P L+S++ Q +++I +KL +V L++ M
Sbjct: 293 PTLQSITWQMIEQIQFVKLFGMVKIDNLLQEM 324
>BC105009-1|AAI05010.1| 408|Homo sapiens HNF4G protein protein.
Length = 408
Score = 98.7 bits (235), Expect = 5e-20
Identities = 78/332 (23%), Positives = 141/332 (42%), Gaps = 21/332 (6%)
Query: 232 LCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXX 291
LCA+CGD A +HYG +C+GCKGFF+R+++K Y C + C VD
Sbjct: 11 LCAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSCRFSRQCVVDKDKRNQCRYCRLR 70
Query: 292 XCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRA-HVDTSPDFAN 350
C GM KE V+ + R R+ L A VR+ + S ++
Sbjct: 71 KCFRAGMKKEAVQNE-----RDRISTRRSTFDGSNIPSINTLAQAEVRSRQISVSSPGSS 125
Query: 351 LDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFAS 410
D + + + I + + ++ +A+ +P + +L +D+ L +
Sbjct: 126 TDIN-----------VKKIASIGDVCESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRA 174
Query: 411 ARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRSFGDWLHAVLD-FSNTLHSMDIDI 469
E +L R+ + L N V+ + C+ + VLD + ID
Sbjct: 175 HAGEHLLLGATKRSMMYKDILLLGNNYVIHRNSCEVEISRVANRVLDELVRPFQEIQIDD 234
Query: 470 STFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGAL 528
+ +ACL A+ D GL +P +++ ++ ++ L ++ F +L L
Sbjct: 235 NEYACLKAIVFFDPDAKGLSDPVKIKNMRFQVQIGLEDYI--NDRQYDSRGRFGELLLLL 292
Query: 529 PELRSLSVQGLQRIFSLKLEDLVPAPPLIENM 560
P L+S++ Q +++I +KL +V L++ M
Sbjct: 293 PTLQSITWQMIEQIQFVKLFGMVKIDNLLQEM 324
>M62760-1|AAA21479.1| 351|Homo sapiens ovalbumin upstream promoter
transcription factor II protein.
Length = 351
Score = 97.9 bits (233), Expect = 8e-20
Identities = 92/338 (27%), Positives = 140/338 (41%), Gaps = 28/338 (8%)
Query: 178 VQRSESNSSNDSPKLHGTRVHCMQ-PSTPNSA--SSSPGVAPADNTGPRAAPSSPSQL-- 232
V S+ + ++ +P + G P TP +S+P A G P S Q
Sbjct: 15 VPGSQGSQASQAPPVPGPPPGAPHTPQTPGQGGPASTPAQTAAGGQGGPGGPGSDKQQQQ 74
Query: 233 ----CAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXX 288
C VCGD ++ +HYG TCEGCK FFKR+V++ Y C A ++CP+D
Sbjct: 75 QHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYC 134
Query: 289 XXXXCLAVGMVKEVV---RTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAHVDTS 345
CL VGM +E V R + G+ I+ L+RA +
Sbjct: 135 RLKKCLKVGMRREAVQRGRMPPTQPTHGQF-ALTNGDPLNCHSYLSGYISLLLRAEPYPT 193
Query: 346 PDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDRE 405
F SQ +P+ + M + +L ++++ +A +P + DL D+
Sbjct: 194 SRFG----SQCMQPNNI---MGIENICELAARMLFSAVE----WARNIPFFPDLQITDQV 242
Query: 406 QLFASARLELFVLRLAYRTR-LEDTKLTFCNGLVLDKRQCQR--SFGDWLHAVLDFSNTL 462
L ELFVL A + L L GL R +F D + + L
Sbjct: 243 ALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKL 302
Query: 463 HSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMK 499
++ +D + ++CL A+ L T D GL + VE LQ K
Sbjct: 303 KALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEK 340
>BC035137-1|AAH35137.1| 451|Homo sapiens THRA protein protein.
Length = 451
Score = 97.5 bits (232), Expect = 1e-19
Identities = 104/379 (27%), Positives = 155/379 (40%), Gaps = 40/379 (10%)
Query: 195 TRVHCMQPSTPNSASSSPGVAPADNTGPRAAPSS-----PSQL-----CAVCGDTAACQH 244
++V C NSA S G N G + +S PS L C VCGD A H
Sbjct: 6 SKVECGSDPEENSARSPDGKRKRKN-GQCSLKTSMSGYIPSYLDKDEQCVVCGDKATGYH 64
Query: 245 YGVRTCEGCKGFFKRTVQKG--SKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEV 302
Y TCEGCKGFF+RT+QK Y C + C +D C+AVGM ++
Sbjct: 65 YRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKITRNQCQLCRFKKCIAVGMAMDL 124
Query: 303 VRTDSLKGRRGRLXXXXXXXXXXXXXXXX------------XLITALVRAHVDTSPDFAN 350
V DS + + +L LI AH T+ ++
Sbjct: 125 VLDDSKRVAKRKLIEQNRERRRKEEMIRSLQQRPEPTPEEWDLIHIATEAHRSTNAQGSH 184
Query: 351 LDYSQYREP-----SPL-EPPMSD---LEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCP 401
+ P SP+ P D LE +F ++T +I + FA+K+P + +L
Sbjct: 185 WKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPC 244
Query: 402 EDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR-SFGDWLHAVLDFSN 460
ED+ L +E+ LR A R E LT + + + Q + G A+ +
Sbjct: 245 EDQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIFELGK 304
Query: 461 TLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAP 519
+L + ++D + A L A+ L+ TDR GL ++E+ Q L A P
Sbjct: 305 SLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQE---AYLLAFEHYVNHRKHNIP 361
Query: 520 HF-SRVLGALPELRSLSVQ 537
HF ++L P++R L Q
Sbjct: 362 HFWPKLLMKGPQVRQLEQQ 380
>CR542091-1|CAG46888.1| 408|Homo sapiens HNF4G protein.
Length = 408
Score = 97.1 bits (231), Expect = 1e-19
Identities = 77/332 (23%), Positives = 141/332 (42%), Gaps = 21/332 (6%)
Query: 232 LCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXX 291
LCA+CGD A +HYG +C+GCKGFF+R+++K Y C + C VD
Sbjct: 11 LCAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSCRFSRQCVVDKDKRNQCRYCRLR 70
Query: 292 XCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALVRA-HVDTSPDFAN 350
C GM K+ V+ + R R+ L A VR+ + S ++
Sbjct: 71 KCFRAGMKKKAVQNE-----RDRISTRRSTFDGSNIPSINTLAQAEVRSRQISVSSPGSS 125
Query: 351 LDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFAS 410
D + + + I + + ++ +A+ +P + +L +D+ L +
Sbjct: 126 TDIN-----------VKKIASIGDVCESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRA 174
Query: 411 ARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRSFGDWLHAVLD-FSNTLHSMDIDI 469
E +L R+ + L N V+ + C+ + VLD + ID
Sbjct: 175 HSGEHLLLGATKRSMMYKDILLLGNNYVIHRNSCEVEISRVANRVLDELVRPFQEIQIDD 234
Query: 470 STFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGAL 528
+ +ACL A+ D GL +P +++ ++ ++ L ++ F +L L
Sbjct: 235 NEYACLKAIVFFDPDAKGLSDPVKIKNMRFQVQIGLEDYI--NDRQYDSRGRFGELLLLL 292
Query: 529 PELRSLSVQGLQRIFSLKLEDLVPAPPLIENM 560
P L+S++ Q +++I +KL +V L++ M
Sbjct: 293 PTLQSITWQMIEQIQFVKLFGMVKIDNLLQEM 324
>U68233-1|AAB08107.1| 472|Homo sapiens farnesol receptor HRR-1
protein.
Length = 472
Score = 96.7 bits (230), Expect = 2e-19
Identities = 90/362 (24%), Positives = 150/362 (41%), Gaps = 33/362 (9%)
Query: 221 GPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXX 280
G A +LC VCGD A+ HY TCEGCKGFF+R++ K + Y C +C +D
Sbjct: 115 GASAGRIKGDELCVVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCVMDMY 174
Query: 281 XXXXXXXXXXXXCLAVGMVKEVVRTD-SLKGRRGR------LXXXXXXXXXXXXXXXXXL 333
C +GM+ E + T+ K +R R
Sbjct: 175 MRRKCQECRLRKCKEMGMLAECLLTEIQCKSKRLRKNVKQHADQTVNEDSEGRDLRQVTS 234
Query: 334 ITALVRAHVDTSPDFANL------DYSQYREPSP-----LEPPMSDLEVIHQFYSLLTTS 382
T R + +PD L Y++ R P L+ S E + T
Sbjct: 235 TTKSCREKTELTPDQQTLLHFIMDSYNKQRMPQEITNKILKEEFSAEENFLILTEMATNH 294
Query: 383 IDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKR 442
+ ++ F +K+PG+ L ED+ L + +E LR A + + KL + +L++R
Sbjct: 295 VQVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSA---EIFNKKLPSGHSDLLEER 351
Query: 443 QCQRSFGD-WLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMKI 500
D ++ + F ++ + + +A L A+ +++ DR +K+ VE+LQ +
Sbjct: 352 IRNSGISDEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPL 411
Query: 501 IGCL----RAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPL 556
+ L + H P HF+ +LG L ELR+ + + + S ++ D P L
Sbjct: 412 LDVLQKLCKIHQP------ENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLL 465
Query: 557 IE 558
E
Sbjct: 466 CE 467
>AF478445-1|AAM53550.1| 482|Homo sapiens farnesoid-X-receptor beta
splice variant 1 protein.
Length = 482
Score = 96.7 bits (230), Expect = 2e-19
Identities = 90/362 (24%), Positives = 150/362 (41%), Gaps = 33/362 (9%)
Query: 221 GPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXX 280
G A +LC VCGD A+ HY TCEGCKGFF+R++ K + Y C +C +D
Sbjct: 125 GASAGRIKGDELCVVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCVMDMY 184
Query: 281 XXXXXXXXXXXXCLAVGMVKEVVRTD-SLKGRRGR------LXXXXXXXXXXXXXXXXXL 333
C +GM+ E + T+ K +R R
Sbjct: 185 MRRKCQECRLRKCKEMGMLAECLLTEIQCKSKRLRKNVKQHADQTVNEDSEGRDLRQVTS 244
Query: 334 ITALVRAHVDTSPDFANL------DYSQYREPSP-----LEPPMSDLEVIHQFYSLLTTS 382
T R + +PD L Y++ R P L+ S E + T
Sbjct: 245 TTKSCREKTELTPDQQTLLHFIMDSYNKQRMPQEITNKILKEEFSAEENFLILTEMATNH 304
Query: 383 IDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKR 442
+ ++ F +K+PG+ L ED+ L + +E LR A + + KL + +L++R
Sbjct: 305 VQVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSA---EIFNKKLPSGHSDLLEER 361
Query: 443 QCQRSFGD-WLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMKI 500
D ++ + F ++ + + +A L A+ +++ DR +K+ VE+LQ +
Sbjct: 362 IRNSGISDEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPL 421
Query: 501 IGCL----RAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPL 556
+ L + H P HF+ +LG L ELR+ + + + S ++ D P L
Sbjct: 422 LDVLQKLCKIHQP------ENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLL 475
Query: 557 IE 558
E
Sbjct: 476 CE 477
>M24899-1|AAA35783.1| 490|Homo sapiens triiodothyronine receptor
protein.
Length = 490
Score = 96.3 bits (229), Expect = 3e-19
Identities = 94/338 (27%), Positives = 141/338 (41%), Gaps = 36/338 (10%)
Query: 195 TRVHCMQPSTPNSASSSPGVAPADNTGPRAAPSS-----PSQL-----CAVCGDTAACQH 244
++V C NSA S G N G + +S PS L C VCGD A H
Sbjct: 6 SKVECGSDPEENSARSPDGKRKRKN-GQCSLKTSMSGYIPSYLDKDEQCVVCGDKATGYH 64
Query: 245 YGVRTCEGCKGFFKRTVQKG--SKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEV 302
Y TCEGCKGFF+RT+QK Y C + C +D C+AVGM ++
Sbjct: 65 YRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKITRNQCQLCRFKKCIAVGMAMDL 124
Query: 303 VRTDSLKGRRGRLXXXXXXXXXXXXXXXX------------XLITALVRAHVDTSPDFAN 350
V DS + + +L LI AH T+ ++
Sbjct: 125 VLDDSKRVAKRKLIEQNRERRRKEEMIRSLQQRPEPTPEEWDLIHIATEAHRSTNAQGSH 184
Query: 351 LDYSQYREP-----SPL-EPPMSD---LEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCP 401
+ P SP+ P D LE +F ++T +I + FA+K+P + +L
Sbjct: 185 WKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPC 244
Query: 402 EDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR-SFGDWLHAVLDFSN 460
ED+ L +E+ LR A R E LT + + + Q + G A+ +
Sbjct: 245 EDQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIFELGK 304
Query: 461 TLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQ 497
+L + ++D + A L A+ L+ TDR GL ++E+ Q
Sbjct: 305 SLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQ 342
>J03239-1|AAA61176.1| 490|Homo sapiens thyroid hormone receptor
protein.
Length = 490
Score = 96.3 bits (229), Expect = 3e-19
Identities = 94/338 (27%), Positives = 141/338 (41%), Gaps = 36/338 (10%)
Query: 195 TRVHCMQPSTPNSASSSPGVAPADNTGPRAAPSS-----PSQL-----CAVCGDTAACQH 244
++V C NSA S G N G + +S PS L C VCGD A H
Sbjct: 6 SKVECGSDPEENSARSPDGKRKRKN-GQCSLKTSMSGYIPSYLDKDEQCVVCGDKATGYH 64
Query: 245 YGVRTCEGCKGFFKRTVQKG--SKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEV 302
Y TCEGCKGFF+RT+QK Y C + C +D C+AVGM ++
Sbjct: 65 YRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKITRNQCQLCRFKKCIAVGMAMDL 124
Query: 303 VRTDSLKGRRGRLXXXXXXXXXXXXXXXX------------XLITALVRAHVDTSPDFAN 350
V DS + + +L LI AH T+ ++
Sbjct: 125 VLDDSKRVAKRKLIEQNRERRRKEEMIRSLQQRPEPTPEEWDLIHIATEAHRSTNAQGSH 184
Query: 351 LDYSQYREP-----SPL-EPPMSD---LEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCP 401
+ P SP+ P D LE +F ++T +I + FA+K+P + +L
Sbjct: 185 WKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPC 244
Query: 402 EDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR-SFGDWLHAVLDFSN 460
ED+ L +E+ LR A R E LT + + + Q + G A+ +
Sbjct: 245 EDQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIFELGK 304
Query: 461 TLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQ 497
+L + ++D + A L A+ L+ TDR GL ++E+ Q
Sbjct: 305 SLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQ 342
>BC002728-1|AAH02728.1| 490|Homo sapiens thyroid hormone receptor,
alpha (erythroblastic leukemia viral (v-erb-a) oncoge
protein.
Length = 490
Score = 96.3 bits (229), Expect = 3e-19
Identities = 94/338 (27%), Positives = 141/338 (41%), Gaps = 36/338 (10%)
Query: 195 TRVHCMQPSTPNSASSSPGVAPADNTGPRAAPSS-----PSQL-----CAVCGDTAACQH 244
++V C NSA S G N G + +S PS L C VCGD A H
Sbjct: 6 SKVECGSDPEENSARSPDGKRKRKN-GQCSLKTSMSGYIPSYLDKDEQCVVCGDKATGYH 64
Query: 245 YGVRTCEGCKGFFKRTVQKG--SKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEV 302
Y TCEGCKGFF+RT+QK Y C + C +D C+AVGM ++
Sbjct: 65 YRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKITRNQCQLCRFKKCIAVGMAMDL 124
Query: 303 VRTDSLKGRRGRLXXXXXXXXXXXXXXXX------------XLITALVRAHVDTSPDFAN 350
V DS + + +L LI AH T+ ++
Sbjct: 125 VLDDSKRVAKRKLIEQNRERRRKEEMIRSLQQRPEPTPEEWDLIHIATEAHRSTNAQGSH 184
Query: 351 LDYSQYREP-----SPL-EPPMSD---LEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCP 401
+ P SP+ P D LE +F ++T +I + FA+K+P + +L
Sbjct: 185 WKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPC 244
Query: 402 EDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR-SFGDWLHAVLDFSN 460
ED+ L +E+ LR A R E LT + + + Q + G A+ +
Sbjct: 245 EDQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIFELGK 304
Query: 461 TLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQ 497
+L + ++D + A L A+ L+ TDR GL ++E+ Q
Sbjct: 305 SLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQ 342
>BC000261-1|AAH00261.1| 490|Homo sapiens thyroid hormone receptor,
alpha (erythroblastic leukemia viral (v-erb-a) oncoge
protein.
Length = 490
Score = 96.3 bits (229), Expect = 3e-19
Identities = 94/338 (27%), Positives = 141/338 (41%), Gaps = 36/338 (10%)
Query: 195 TRVHCMQPSTPNSASSSPGVAPADNTGPRAAPSS-----PSQL-----CAVCGDTAACQH 244
++V C NSA S G N G + +S PS L C VCGD A H
Sbjct: 6 SKVECGSDPEENSARSPDGKRKRKN-GQCSLKTSMSGYIPSYLDKDEQCVVCGDKATGYH 64
Query: 245 YGVRTCEGCKGFFKRTVQKG--SKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEV 302
Y TCEGCKGFF+RT+QK Y C + C +D C+AVGM ++
Sbjct: 65 YRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKITRNQCQLCRFKKCIAVGMAMDL 124
Query: 303 VRTDSLKGRRGRLXXXXXXXXXXXXXXXX------------XLITALVRAHVDTSPDFAN 350
V DS + + +L LI AH T+ ++
Sbjct: 125 VLDDSKRVAKRKLIEQNRERRRKEEMIRSLQQRPEPTPEEWDLIHIATEAHRSTNAQGSH 184
Query: 351 LDYSQYREP-----SPL-EPPMSD---LEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCP 401
+ P SP+ P D LE +F ++T +I + FA+K+P + +L
Sbjct: 185 WKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPC 244
Query: 402 EDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR-SFGDWLHAVLDFSN 460
ED+ L +E+ LR A R E LT + + + Q + G A+ +
Sbjct: 245 EDQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIFELGK 304
Query: 461 TLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQ 497
+L + ++D + A L A+ L+ TDR GL ++E+ Q
Sbjct: 305 SLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQ 342
>X55074-2|CAB57886.1| 490|Homo sapiens thyroid hormone receptor
alpha 2 protein.
Length = 490
Score = 95.9 bits (228), Expect = 3e-19
Identities = 94/338 (27%), Positives = 141/338 (41%), Gaps = 36/338 (10%)
Query: 195 TRVHCMQPSTPNSASSSPGVAPADNTGPRAAPSS-----PSQL-----CAVCGDTAACQH 244
++V C NSA S G N G + +S PS L C VCGD A H
Sbjct: 6 SKVECGSDPEENSARSPDGKRKRKN-GQCSLKTSMSGYIPSYLDKDEQCVVCGDKATGYH 64
Query: 245 YGVRTCEGCKGFFKRTVQKG--SKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEV 302
Y TCEGCKGFF+RT+QK Y C + C +D C+AVGM ++
Sbjct: 65 YRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKITRNQCQLCRFKKCIAVGMAMDL 124
Query: 303 VRTDSLKGRRGRLXXXXXXXXXXXXXXXX------------XLITALVRAHVDTSPDFAN 350
V DS + + +L LI AH T+ ++
Sbjct: 125 VLDDSKRVAKRKLIEQNRERRRKEEMIRSLQQRPEPTPEEWDLIHIATEAHRSTNAQGSH 184
Query: 351 LDYSQYREP-----SPL-EPPMSD---LEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCP 401
+ P SP+ P D LE +F ++T +I + FA+K+P + +L
Sbjct: 185 WKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPC 244
Query: 402 EDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR-SFGDWLHAVLDFSN 460
ED+ L +E+ LR A R E LT + + + Q + G A+ +
Sbjct: 245 EDQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKRAQLKNGGLGVVSDAIFELGK 304
Query: 461 TLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQ 497
+L + ++D + A L A+ L+ TDR GL ++E+ Q
Sbjct: 305 SLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQ 342
>Y00479-1|CAA68539.1| 490|Homo sapiens protein ( H.sapiens mRNA for
thyroid hormone receptor. ).
Length = 490
Score = 95.1 bits (226), Expect = 6e-19
Identities = 94/338 (27%), Positives = 140/338 (41%), Gaps = 36/338 (10%)
Query: 195 TRVHCMQPSTPNSASSSPGVAPADNTGPRAAPSS-----PSQL-----CAVCGDTAACQH 244
++V C NSA S G N G + SS PS L C VCGD A H
Sbjct: 6 SKVECGSDPEENSARSPDGKRKRKN-GQCSLKSSMSGYIPSYLDKDEQCVVCGDKATGYH 64
Query: 245 YGVRTCEGCKGFFKRTVQKG--SKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEV 302
Y TCEGCKGFF+RT+QK Y C + C +D C+AV M ++
Sbjct: 65 YRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKITRNQCQLCRFKKCIAVAMAMDL 124
Query: 303 VRTDSLKGRRGRLXXXXXXXXXXXXXXXX------------XLITALVRAHVDTSPDFAN 350
V DS + + +L LI AH T+ ++
Sbjct: 125 VLDDSKRVAKRKLIEQNRERRRKEEMIRSLQQRPEPTPEEWDLIHIATEAHRSTNAQGSH 184
Query: 351 LDYSQYREP-----SPL-EPPMSD---LEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCP 401
+ P SP+ P D LE +F ++T +I + FA+K+P + +L
Sbjct: 185 WKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPC 244
Query: 402 EDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR-SFGDWLHAVLDFSN 460
ED+ L +E+ LR A R E LT + + + Q + G A+ +
Sbjct: 245 EDQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIFELGK 304
Query: 461 TLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQ 497
+L + ++D + A L A+ L+ TDR GL ++E+ Q
Sbjct: 305 SLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQ 342
>BC071778-1|AAH71778.1| 475|Homo sapiens NR1H4 protein protein.
Length = 475
Score = 94.3 bits (224), Expect = 1e-18
Identities = 91/366 (24%), Positives = 151/366 (41%), Gaps = 37/366 (10%)
Query: 221 GPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXX 280
G A +LC VCGD A+ HY TCEGCKGFF+R++ K + Y C +C +D
Sbjct: 114 GASAGRIKGDELCVVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCVMDMY 173
Query: 281 XXXXXXXXXXXXCLAVGMVKEVVRTDSL-----KGRRGR------LXXXXXXXXXXXXXX 329
C +GM+ E + T L K +R R
Sbjct: 174 MRRKCQECRLRKCKEMGMLAECMYTGLLTEIQCKSKRLRKNVKQHADQTVNEDSEGRDLR 233
Query: 330 XXXLITALVRAHVDTSPDFANL------DYSQYREPSP-----LEPPMSDLEVIHQFYSL 378
T R + +PD L Y++ R P L+ +S E +
Sbjct: 234 QVTSTTKSCREKTELTPDQQTLLHFIMDSYNKQRMPQEITNKILKEELSAEENFLILTEM 293
Query: 379 LTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLV 438
T + ++ F +K+PG+ L ED+ L + +E LR A + + KL + +
Sbjct: 294 ATNHVQVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSA---EIFNKKLPSGHSDL 350
Query: 439 LDKRQCQRSFGD-WLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQL 496
L++R D ++ + F ++ + + +A L A+ +++ DR +K+ VE+L
Sbjct: 351 LEERIRNSGISDEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKL 410
Query: 497 QMKIIGCL----RAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVP 552
Q ++ L + H P HF+ +LG L ELR+ + + + S ++ D
Sbjct: 411 QEPLLDVLQKLCKIHQP------ENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKF 464
Query: 553 APPLIE 558
P L E
Sbjct: 465 TPLLCE 470
>BC130573-1|AAI30574.1| 476|Homo sapiens NR1H4 protein protein.
Length = 476
Score = 93.5 bits (222), Expect = 2e-18
Identities = 91/366 (24%), Positives = 150/366 (40%), Gaps = 37/366 (10%)
Query: 221 GPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXX 280
G A +LC VCGD A+ HY TCEGCKGFF+R++ K + Y C +C +D
Sbjct: 115 GASAGRIKGDELCVVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCVMDMY 174
Query: 281 XXXXXXXXXXXXCLAVGMVKEVVRTDSL-----KGRRGR------LXXXXXXXXXXXXXX 329
C +GM+ E + T L K +R R
Sbjct: 175 MRRKCQECRLRKCKEMGMLAECMYTGLLTEIQCKSKRLRKNVKQHADQTVNEDSEGRDLR 234
Query: 330 XXXLITALVRAHVDTSPDFANL------DYSQYREPSP-----LEPPMSDLEVIHQFYSL 378
T R + +PD L Y++ R P L+ S E +
Sbjct: 235 QVTSTTKSCREKTELTPDQQTLLHFIMDSYNKQRMPQEITNKILKEEFSAEENFLILTEM 294
Query: 379 LTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLV 438
T + ++ F +K+PG+ L ED+ L + +E LR A + + KL + +
Sbjct: 295 ATNHVQVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSA---EIFNKKLPSGHSDL 351
Query: 439 LDKRQCQRSFGD-WLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQL 496
L++R D ++ + F ++ + + +A L A+ +++ DR +K+ VE+L
Sbjct: 352 LEERIRNSGISDEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKL 411
Query: 497 QMKIIGCL----RAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVP 552
Q ++ L + H P HF+ +LG L ELR+ + + + S ++ D
Sbjct: 412 QEPLLDVLQKLCKIHQP------ENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKF 465
Query: 553 APPLIE 558
P L E
Sbjct: 466 TPLLCE 471
>AF478446-1|AAM53551.1| 486|Homo sapiens farnesoid-X-receptor beta
splice variant 2 protein.
Length = 486
Score = 93.5 bits (222), Expect = 2e-18
Identities = 91/366 (24%), Positives = 150/366 (40%), Gaps = 37/366 (10%)
Query: 221 GPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXX 280
G A +LC VCGD A+ HY TCEGCKGFF+R++ K + Y C +C +D
Sbjct: 125 GASAGRIKGDELCVVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCVMDMY 184
Query: 281 XXXXXXXXXXXXCLAVGMVKEVVRTDSL-----KGRRGR------LXXXXXXXXXXXXXX 329
C +GM+ E + T L K +R R
Sbjct: 185 MRRKCQECRLRKCKEMGMLAECMYTGLLTEIQCKSKRLRKNVKQHADQTVNEDSEGRDLR 244
Query: 330 XXXLITALVRAHVDTSPDFANL------DYSQYREPSP-----LEPPMSDLEVIHQFYSL 378
T R + +PD L Y++ R P L+ S E +
Sbjct: 245 QVTSTTKSCREKTELTPDQQTLLHFIMDSYNKQRMPQEITNKILKEEFSAEENFLILTEM 304
Query: 379 LTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLV 438
T + ++ F +K+PG+ L ED+ L + +E LR A + + KL + +
Sbjct: 305 ATNHVQVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSA---EIFNKKLPSGHSDL 361
Query: 439 LDKRQCQRSFGD-WLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQL 496
L++R D ++ + F ++ + + +A L A+ +++ DR +K+ VE+L
Sbjct: 362 LEERIRNSGISDEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKL 421
Query: 497 QMKIIGCL----RAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVP 552
Q ++ L + H P HF+ +LG L ELR+ + + + S ++ D
Sbjct: 422 QEPLLDVLQKLCKIHQP------ENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKF 475
Query: 553 APPLIE 558
P L E
Sbjct: 476 TPLLCE 481
>AF384555-1|AAK60271.1| 476|Homo sapiens farnesol receptor protein.
Length = 476
Score = 93.5 bits (222), Expect = 2e-18
Identities = 91/366 (24%), Positives = 150/366 (40%), Gaps = 37/366 (10%)
Query: 221 GPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXX 280
G A +LC VCGD A+ HY TCEGCKGFF+R++ K + Y C +C +D
Sbjct: 115 GASAGRIKGDELCVVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCVMDMY 174
Query: 281 XXXXXXXXXXXXCLAVGMVKEVVRTDSL-----KGRRGR------LXXXXXXXXXXXXXX 329
C +GM+ E + T L K +R R
Sbjct: 175 MRRKCQECRLRKCKEMGMLAECMYTGLLTEIQCKSKRLRKNVKQHADQTVNEDSEGRDLR 234
Query: 330 XXXLITALVRAHVDTSPDFANL------DYSQYREPSP-----LEPPMSDLEVIHQFYSL 378
T R + +PD L Y++ R P L+ S E +
Sbjct: 235 QVTSTTKSCREKTELTPDQQTLLHFIMDSYNKQRMPQEITNKILKEEFSAEENFLILTEM 294
Query: 379 LTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLV 438
T + ++ F +K+PG+ L ED+ L + +E LR A + + KL + +
Sbjct: 295 ATNHVQVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSA---EIFNKKLPSGHSDL 351
Query: 439 LDKRQCQRSFGD-WLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQL 496
L++R D ++ + F ++ + + +A L A+ +++ DR +K+ VE+L
Sbjct: 352 LEERIRNSGISDEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKL 411
Query: 497 QMKIIGCL----RAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVP 552
Q ++ L + H P HF+ +LG L ELR+ + + + S ++ D
Sbjct: 412 QEPLLDVLQKLCKIHQP------ENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKF 465
Query: 553 APPLIE 558
P L E
Sbjct: 466 TPLLCE 471
>BC069626-1|AAH69626.1| 352|Homo sapiens nuclear receptor subfamily
1, group I, member 3 protein.
Length = 352
Score = 91.1 bits (216), Expect = 1e-17
Identities = 78/318 (24%), Positives = 132/318 (41%), Gaps = 16/318 (5%)
Query: 233 CAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXX 292
C VCGD A H+ TCEGCKGFF+RTV K C SC V
Sbjct: 11 CVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCPACRLQK 70
Query: 293 CLAVGMVKE-VVRTDSLKGRRGRLXXXXXXXX-XXXXXXXXXLITALVRAHVDTSPDFAN 350
CL GM K+ ++ ++L RR + LI L+ AH
Sbjct: 71 CLDAGMRKDMILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFE 130
Query: 351 LDYSQYREPS-------PLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPED 403
+ Q+R P+ PL L ++ F + T + + F + +P + L ED
Sbjct: 131 -QFVQFRPPAHLFIHHQPLPTLAPVLPLVTHFADINTFMVLQVIKFTKDLPVFRSLPIED 189
Query: 404 REQLFASARLEL--FVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRSFG---DWLHAVLDF 458
+ L A +E+ VL + + ++ + D + + G ++L + F
Sbjct: 190 QISLLKGAAVEICHIVLNTTFCLQTQNFLCGPLRYTIEDGARVSPTVGFQVEFLELLFHF 249
Query: 459 SNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXX 517
TL + + + L A+ L + DR G+ + ++QLQ ++ L++++
Sbjct: 250 HGTLRKLQLQEPEYVLLAAMALFSPDRPGVTQRDEIDQLQEEMALTLQSYIKGQQRRPRD 309
Query: 518 APHFSRVLGALPELRSLS 535
++++LG L ELRS++
Sbjct: 310 RFLYAKLLGLLAELRSIN 327
>AY680697-1|AAT91238.1| 452|Homo sapiens hepatocyte nuclear factor
4 alpha, transcript variant 8 protein.
Length = 452
Score = 91.1 bits (216), Expect = 1e-17
Identities = 88/362 (24%), Positives = 147/362 (40%), Gaps = 23/362 (6%)
Query: 210 SSPGVAPADNTGPRAAPS-SPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYV 268
SS +P++ T A S S LCA+CGD A +HYG +C+GCKGFF+R+V+K Y
Sbjct: 14 SSYDTSPSEGTNLNAPNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYS 73
Query: 269 CLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXX 328
C + C VD C GM KE V+ + R R+
Sbjct: 74 CRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNE-----RDRISTRRSSYEDSSLP 128
Query: 329 XXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKL 388
L+ A V + TSP S + S +V L ++
Sbjct: 129 SINALLQAEVLSRQITSP------VSGINGDIRAKKIASIADVCESMKEQLLVLVE---- 178
Query: 389 FAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR-- 446
+A+ +P + +L +D+ L + E +L R+ + L N ++ R C
Sbjct: 179 WAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIV-PRHCPELA 237
Query: 447 SFGDWLHAVLD-FSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCL 504
+LD + ID + +A L A+ D GL +P ++++L+ ++ L
Sbjct: 238 EMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSL 297
Query: 505 RAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRAS 564
++ F +L LP L+S++ Q +++I +KL + L++ M
Sbjct: 298 EDYI--NDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEMLLGG 355
Query: 565 LP 566
P
Sbjct: 356 SP 357
>AY680696-1|AAT91237.1| 442|Homo sapiens hepatocyte nuclear factor
4 alpha, transcript variant 7 protein.
Length = 442
Score = 91.1 bits (216), Expect = 1e-17
Identities = 88/362 (24%), Positives = 147/362 (40%), Gaps = 23/362 (6%)
Query: 210 SSPGVAPADNTGPRAAPS-SPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYV 268
SS +P++ T A S S LCA+CGD A +HYG +C+GCKGFF+R+V+K Y
Sbjct: 14 SSYDTSPSEGTNLNAPNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYS 73
Query: 269 CLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXX 328
C + C VD C GM KE V+ + R R+
Sbjct: 74 CRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNE-----RDRISTRRSSYEDSSLP 128
Query: 329 XXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKL 388
L+ A V + TSP S + S +V L ++
Sbjct: 129 SINALLQAEVLSRQITSP------VSGINGDIRAKKIASIADVCESMKEQLLVLVE---- 178
Query: 389 FAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR-- 446
+A+ +P + +L +D+ L + E +L R+ + L N ++ R C
Sbjct: 179 WAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIV-PRHCPELA 237
Query: 447 SFGDWLHAVLD-FSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCL 504
+LD + ID + +A L A+ D GL +P ++++L+ ++ L
Sbjct: 238 EMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSL 297
Query: 505 RAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRAS 564
++ F +L LP L+S++ Q +++I +KL + L++ M
Sbjct: 298 EDYI--NDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEMLLGG 355
Query: 565 LP 566
P
Sbjct: 356 SP 357
>AL590714-14|CAH72153.1| 352|Homo sapiens nuclear receptor
subfamily 1, group I, member 3 protein.
Length = 352
Score = 91.1 bits (216), Expect = 1e-17
Identities = 78/318 (24%), Positives = 132/318 (41%), Gaps = 16/318 (5%)
Query: 233 CAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXX 292
C VCGD A H+ TCEGCKGFF+RTV K C SC V
Sbjct: 11 CVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCPACRLQK 70
Query: 293 CLAVGMVKE-VVRTDSLKGRRGRLXXXXXXXX-XXXXXXXXXLITALVRAHVDTSPDFAN 350
CL GM K+ ++ ++L RR + LI L+ AH
Sbjct: 71 CLDAGMRKDMILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFE 130
Query: 351 LDYSQYREPS-------PLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPED 403
+ Q+R P+ PL L ++ F + T + + F + +P + L ED
Sbjct: 131 -QFVQFRPPAHLFIHHQPLPTLAPVLPLVTHFADINTFMVLQVIKFTKDLPVFRSLPIED 189
Query: 404 REQLFASARLEL--FVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRSFG---DWLHAVLDF 458
+ L A +E+ VL + + ++ + D + + G ++L + F
Sbjct: 190 QISLLKGAAVEICHIVLNTTFCLQTQNFLCGPLRYTIEDGARVSPTVGFQVEFLELLFHF 249
Query: 459 SNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXX 517
TL + + + L A+ L + DR G+ + ++QLQ ++ L++++
Sbjct: 250 HGTLRKLQLQEPEYVLLAAMALFSPDRPGVTQRDEIDQLQEEMALTLQSYIKGQQRRPRD 309
Query: 518 APHFSRVLGALPELRSLS 535
++++LG L ELRS++
Sbjct: 310 RFLYAKLLGLLAELRSIN 327
>Z49825-1|CAA89989.1| 504|Homo sapiens hepatocyte nuclear factor 4
alpha (HNF4alpha4) protein.
Length = 504
Score = 90.6 bits (215), Expect = 1e-17
Identities = 90/371 (24%), Positives = 149/371 (40%), Gaps = 25/371 (6%)
Query: 203 STPNSASSSP--GVAPADNTGPRAAPS-SPSQLCAVCGDTAACQHYGVRTCEGCKGFFKR 259
S SSP +P++ T A S S LCA+CGD A +HYG +C+GCKGFF+R
Sbjct: 57 SISGGVDSSPQGDTSPSEGTNLNAPNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRR 116
Query: 260 TVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXX 319
+V+K Y C + C VD C GM KE V+ + R R+
Sbjct: 117 SVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNE-----RDRISTRR 171
Query: 320 XXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLL 379
L+ A V + TSP S + S +V L
Sbjct: 172 SSYEDSSLPSINALLQAEVLSRQITSP------VSGINGDIRAKKIASIADVCESMKEQL 225
Query: 380 TTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVL 439
++ +A+ +P + +L +D+ L + E +L R+ + L N ++
Sbjct: 226 LVLVE----WAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIV 281
Query: 440 DKRQCQR--SFGDWLHAVLD-FSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQ 495
R C +LD + ID + +A L A+ D GL +P ++++
Sbjct: 282 -PRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKR 340
Query: 496 LQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPP 555
L+ ++ L ++ F +L LP L+S++ Q +++I +KL +
Sbjct: 341 LRSQVQVSLEDYI--NDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDN 398
Query: 556 LIENMFRASLP 566
L++ M P
Sbjct: 399 LLQEMLLGGSP 409
>X99101-1|CAA67555.1| 477|Homo sapiens estrogen receptor beta
protein.
Length = 477
Score = 90.6 bits (215), Expect = 1e-17
Identities = 83/362 (22%), Positives = 147/362 (40%), Gaps = 20/362 (5%)
Query: 220 TGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDX 279
TGP + + CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 85 TGPGS--KRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDK 142
Query: 280 XXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGR--RGRLXXXXXXXXXXXXXXXXXLITAL 337
C VGMVK R + R R + +
Sbjct: 143 NRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHCAGKAKRSGGHAPRV 202
Query: 338 VRAHVDT-SPDFANLDYSQYREPSPL----EPPMSDLEVIHQFYSLLTTSIDMIKLFAEK 392
+D SP+ L + P L P ++ ++ L + + +A+K
Sbjct: 203 RELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTKLADKELVHMISWAKK 262
Query: 393 VPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQ--CQRSFGD 450
+PG+ +L D+ +L S +E+ ++ L +R+ KL F LVLD+ + C +
Sbjct: 263 IPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDLVLDRDEGKCVEGILE 322
Query: 451 WLHAVLDFSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRA--- 506
+L ++ + + + C+ A+ L+ + + L + K+ L A
Sbjct: 323 IFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDADSSRKLAHLLNAVTD 382
Query: 507 -----HMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMF 561
+ + +L L +R S +G++ + ++K +++VP L+ M
Sbjct: 383 ALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMKCKNVVPVYDLLLEML 442
Query: 562 RA 563
A
Sbjct: 443 NA 444
>U72969-1|AAB48082.1| 516|Homo sapiens hepatocyte nuclear factor
4-alpha protein.
Length = 516
Score = 90.6 bits (215), Expect = 1e-17
Identities = 90/371 (24%), Positives = 149/371 (40%), Gaps = 25/371 (6%)
Query: 203 STPNSASSSP--GVAPADNTGPRAAPS-SPSQLCAVCGDTAACQHYGVRTCEGCKGFFKR 259
S SSP +P++ T A S S LCA+CGD A +HYG +C+GCKGFF+R
Sbjct: 69 SISGGVDSSPQGDTSPSEGTNLNAPNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRR 128
Query: 260 TVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXX 319
+V+K Y C + C VD C GM KE V+ + R R+
Sbjct: 129 SVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNE-----RDRISTRR 183
Query: 320 XXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLL 379
L+ A V + TSP S + S +V L
Sbjct: 184 SSYEDSSLPSINALLQAEVLSRQITSP------VSGINGDIRAKKIASIADVCESMKEQL 237
Query: 380 TTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVL 439
++ +A+ +P + +L +D+ L + E +L R+ + L N ++
Sbjct: 238 LVLVE----WAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIV 293
Query: 440 DKRQCQR--SFGDWLHAVLD-FSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQ 495
R C +LD + ID + +A L A+ D GL +P ++++
Sbjct: 294 -PRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKR 352
Query: 496 LQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPP 555
L+ ++ L ++ F +L LP L+S++ Q +++I +KL +
Sbjct: 353 LRSQVQVSLEDYI--NDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDN 410
Query: 556 LIENMFRASLP 566
L++ M P
Sbjct: 411 LLQEMLLGGSP 421
>AY785359-1|AAV31779.1| 530|Homo sapiens estrogen receptor 2 (ER
beta) protein.
Length = 530
Score = 90.6 bits (215), Expect = 1e-17
Identities = 83/362 (22%), Positives = 147/362 (40%), Gaps = 20/362 (5%)
Query: 220 TGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDX 279
TGP + + CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 138 TGPGS--KRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDK 195
Query: 280 XXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGR--RGRLXXXXXXXXXXXXXXXXXLITAL 337
C VGMVK R + R R + +
Sbjct: 196 NRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHCAGKAKRSGGHAPRV 255
Query: 338 VRAHVDT-SPDFANLDYSQYREPSPL----EPPMSDLEVIHQFYSLLTTSIDMIKLFAEK 392
+D SP+ L + P L P ++ ++ L + + +A+K
Sbjct: 256 RELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTKLADKELVHMISWAKK 315
Query: 393 VPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQ--CQRSFGD 450
+PG+ +L D+ +L S +E+ ++ L +R+ KL F LVLD+ + C +
Sbjct: 316 IPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDLVLDRDEGKCVEGILE 375
Query: 451 WLHAVLDFSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRA--- 506
+L ++ + + + C+ A+ L+ + + L + K+ L A
Sbjct: 376 IFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDADSSRKLAHLLNAVTD 435
Query: 507 -----HMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMF 561
+ + +L L +R S +G++ + ++K +++VP L+ M
Sbjct: 436 ALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMKCKNVVPVYDLLLEML 495
Query: 562 RA 563
A
Sbjct: 496 NA 497
>AL132772-3|CAI18857.1| 467|Homo sapiens hepatocyte nuclear factor
4, alpha protein.
Length = 467
Score = 90.6 bits (215), Expect = 1e-17
Identities = 90/371 (24%), Positives = 149/371 (40%), Gaps = 25/371 (6%)
Query: 203 STPNSASSSP--GVAPADNTGPRAAPS-SPSQLCAVCGDTAACQHYGVRTCEGCKGFFKR 259
S SSP +P++ T A S S LCA+CGD A +HYG +C+GCKGFF+R
Sbjct: 20 SISGGVDSSPQGDTSPSEGTNLNAPNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRR 79
Query: 260 TVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXX 319
+V+K Y C + C VD C GM KE V+ + R R+
Sbjct: 80 SVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNE-----RDRISTRR 134
Query: 320 XXXXXXXXXXXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLL 379
L+ A V + TSP S + S +V L
Sbjct: 135 SSYEDSSLPSINALLQAEVLSRQITSP------VSGINGDIRAKKIASIADVCESMKEQL 188
Query: 380 TTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVL 439
++ +A+ +P + +L +D+ L + E +L R+ + L N ++
Sbjct: 189 LVLVE----WAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIV 244
Query: 440 DKRQCQR--SFGDWLHAVLD-FSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQ 495
R C +LD + ID + +A L A+ D GL +P ++++
Sbjct: 245 -PRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKR 303
Query: 496 LQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPP 555
L+ ++ L ++ F +L LP L+S++ Q +++I +KL +
Sbjct: 304 LRSQVQVSLEDYI--NDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDN 361
Query: 556 LIENMFRASLP 566
L++ M P
Sbjct: 362 LLQEMLLGGSP 372
>AF215937-2|AAG29940.1| 530|Homo sapiens 5p152 protein.
Length = 530
Score = 90.6 bits (215), Expect = 1e-17
Identities = 83/362 (22%), Positives = 147/362 (40%), Gaps = 20/362 (5%)
Query: 220 TGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDX 279
TGP + + CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 138 TGPGS--KRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDK 195
Query: 280 XXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGR--RGRLXXXXXXXXXXXXXXXXXLITAL 337
C VGMVK R + R R + +
Sbjct: 196 NRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHCAGKAKRSGGHAPRV 255
Query: 338 VRAHVDT-SPDFANLDYSQYREPSPL----EPPMSDLEVIHQFYSLLTTSIDMIKLFAEK 392
+D SP+ L + P L P ++ ++ L + + +A+K
Sbjct: 256 RELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTKLADKELVHMISWAKK 315
Query: 393 VPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQ--CQRSFGD 450
+PG+ +L D+ +L S +E+ ++ L +R+ KL F LVLD+ + C +
Sbjct: 316 IPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDLVLDRDEGKCVEGILE 375
Query: 451 WLHAVLDFSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRA--- 506
+L ++ + + + C+ A+ L+ + + L + K+ L A
Sbjct: 376 IFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDADSSRKLAHLLNAVTD 435
Query: 507 -----HMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMF 561
+ + +L L +R S +G++ + ++K +++VP L+ M
Sbjct: 436 ALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMKCKNVVPVYDLLLEML 495
Query: 562 RA 563
A
Sbjct: 496 NA 497
>AF051427-1|AAC05985.1| 530|Homo sapiens estrogen receptor beta
protein.
Length = 530
Score = 90.6 bits (215), Expect = 1e-17
Identities = 83/362 (22%), Positives = 147/362 (40%), Gaps = 20/362 (5%)
Query: 220 TGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDX 279
TGP + + CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 138 TGPGS--KRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDK 195
Query: 280 XXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGR--RGRLXXXXXXXXXXXXXXXXXLITAL 337
C VGMVK R + R R + +
Sbjct: 196 NRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHCAGKAKRSGGHAPRV 255
Query: 338 VRAHVDT-SPDFANLDYSQYREPSPL----EPPMSDLEVIHQFYSLLTTSIDMIKLFAEK 392
+D SP+ L + P L P ++ ++ L + + +A+K
Sbjct: 256 RELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTKLADKELVHMISWAKK 315
Query: 393 VPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQ--CQRSFGD 450
+PG+ +L D+ +L S +E+ ++ L +R+ KL F LVLD+ + C +
Sbjct: 316 IPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDLVLDRDEGKCVEGILE 375
Query: 451 WLHAVLDFSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRA--- 506
+L ++ + + + C+ A+ L+ + + L + K+ L A
Sbjct: 376 IFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDADSSRKLAHLLNAVTD 435
Query: 507 -----HMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMF 561
+ + +L L +R S +G++ + ++K +++VP L+ M
Sbjct: 436 ALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMKCKNVVPVYDLLLEML 495
Query: 562 RA 563
A
Sbjct: 496 NA 497
>AB006590-1|BAA24953.1| 530|Homo sapiens estrogen receptor beta
protein.
Length = 530
Score = 90.6 bits (215), Expect = 1e-17
Identities = 83/362 (22%), Positives = 147/362 (40%), Gaps = 20/362 (5%)
Query: 220 TGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDX 279
TGP + + CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 138 TGPGS--KRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDK 195
Query: 280 XXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGR--RGRLXXXXXXXXXXXXXXXXXLITAL 337
C VGMVK R + R R + +
Sbjct: 196 NRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHCAGKAKRSGGHAPRV 255
Query: 338 VRAHVDT-SPDFANLDYSQYREPSPL----EPPMSDLEVIHQFYSLLTTSIDMIKLFAEK 392
+D SP+ L + P L P ++ ++ L + + +A+K
Sbjct: 256 RELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTKLADKELVHMISWAKK 315
Query: 393 VPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQ--CQRSFGD 450
+PG+ +L D+ +L S +E+ ++ L +R+ KL F LVLD+ + C +
Sbjct: 316 IPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDLVLDRDEGKCVEGILE 375
Query: 451 WLHAVLDFSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRA--- 506
+L ++ + + + C+ A+ L+ + + L + K+ L A
Sbjct: 376 IFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDADSSRKLAHLLNAVTD 435
Query: 507 -----HMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMF 561
+ + +L L +R S +G++ + ++K +++VP L+ M
Sbjct: 436 ALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMKCKNVVPVYDLLLEML 495
Query: 562 RA 563
A
Sbjct: 496 NA 497
>Z30425-1|CAA83016.1| 348|Homo sapiens orphan nuclear hormone
receptor protein.
Length = 348
Score = 90.2 bits (214), Expect = 2e-17
Identities = 81/315 (25%), Positives = 131/315 (41%), Gaps = 14/315 (4%)
Query: 233 CAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXX 292
C VCGD A H+ TCEGCKGFF+RTV K C SC V
Sbjct: 11 CVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCPACRLQK 70
Query: 293 CLAVGMVKE-VVRTDSLKGRRGRLXXXXXXXX-XXXXXXXXXLITALVRAHVDTSPDFAN 350
CL GM K+ ++ ++L RR + LI L+ AH
Sbjct: 71 CLDAGMRKDMILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFE 130
Query: 351 LDYSQYREPS-------PLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPED 403
+ Q+R P+ PL L ++ F + T + + F + +P + L ED
Sbjct: 131 -QFVQFRPPAHLFIHHQPLPTLAPVLPLVTHFADINTFMVLQVIKFTKDLPVFRSLPIED 189
Query: 404 REQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR-SFG-DWLHAVLDFSNT 461
+ L A +E+ + L L+ T+ C L R F ++L + F T
Sbjct: 190 QISLLKGAAVEICHIVLNTTFCLQ-TQNFLCGPLRYTIEDGARVGFQVEFLELLFHFHGT 248
Query: 462 LHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPH 520
L + + + L A+ L + DR G+ + ++QLQ ++ L++++
Sbjct: 249 LRKLQLQEPEYVLLAAMALFSPDRPGVTQRDEIDQLQEEMALTLQSYIKGQQRRPRDRFL 308
Query: 521 FSRVLGALPELRSLS 535
++++LG L ELRS++
Sbjct: 309 YAKLLGLLAELRSIN 323
>AL590714-13|CAH72154.1| 348|Homo sapiens nuclear receptor
subfamily 1, group I, member 3 protein.
Length = 348
Score = 90.2 bits (214), Expect = 2e-17
Identities = 81/315 (25%), Positives = 131/315 (41%), Gaps = 14/315 (4%)
Query: 233 CAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXX 292
C VCGD A H+ TCEGCKGFF+RTV K C SC V
Sbjct: 11 CVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCPACRLQK 70
Query: 293 CLAVGMVKE-VVRTDSLKGRRGRLXXXXXXXX-XXXXXXXXXLITALVRAHVDTSPDFAN 350
CL GM K+ ++ ++L RR + LI L+ AH
Sbjct: 71 CLDAGMRKDMILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFE 130
Query: 351 LDYSQYREPS-------PLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPED 403
+ Q+R P+ PL L ++ F + T + + F + +P + L ED
Sbjct: 131 -QFVQFRPPAHLFIHHQPLPTLAPVLPLVTHFADINTFMVLQVIKFTKDLPVFRSLPIED 189
Query: 404 REQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR-SFG-DWLHAVLDFSNT 461
+ L A +E+ + L L+ T+ C L R F ++L + F T
Sbjct: 190 QISLLKGAAVEICHIVLNTTFCLQ-TQNFLCGPLRYTIEDGARVGFQVEFLELLFHFHGT 248
Query: 462 LHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPH 520
L + + + L A+ L + DR G+ + ++QLQ ++ L++++
Sbjct: 249 LRKLQLQEPEYVLLAAMALFSPDRPGVTQRDEIDQLQEEMALTLQSYIKGQQRRPRDRFL 308
Query: 521 FSRVLGALPELRSLS 535
++++LG L ELRS++
Sbjct: 309 YAKLLGLLAELRSIN 323
>AY680698-1|AAT91239.1| 395|Homo sapiens hepatocyte nuclear factor
4 alpha, transcript variant 9 protein.
Length = 395
Score = 89.8 bits (213), Expect = 2e-17
Identities = 87/356 (24%), Positives = 146/356 (41%), Gaps = 23/356 (6%)
Query: 210 SSPGVAPADNTGPRAAPS-SPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYV 268
SS +P++ T A S S LCA+CGD A +HYG +C+GCKGFF+R+V+K Y
Sbjct: 14 SSYDTSPSEGTNLNAPNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYS 73
Query: 269 CLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXX 328
C + C VD C GM KE V+ + R R+
Sbjct: 74 CRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNE-----RDRISTRRSSYEDSSLP 128
Query: 329 XXXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKL 388
L+ A V + TSP S + S +V L ++
Sbjct: 129 SINALLQAEVLSRQITSP------VSGINGDIRAKKIASIADVCESMKEQLLVLVE---- 178
Query: 389 FAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR-- 446
+A+ +P + +L +D+ L + E +L R+ + L N ++ R C
Sbjct: 179 WAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIV-PRHCPELA 237
Query: 447 SFGDWLHAVLD-FSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCL 504
+LD + ID + +A L A+ D GL +P ++++L+ ++ L
Sbjct: 238 EMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSL 297
Query: 505 RAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENM 560
++ F +L LP L+S++ Q +++I +KL + L++ M
Sbjct: 298 EDYI--NDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEM 351
>X87871-1|CAA61134.1| 465|Homo sapiens Hepatocyte nuclear factor 4B
protein.
Length = 465
Score = 89.4 bits (212), Expect = 3e-17
Identities = 86/357 (24%), Positives = 145/357 (40%), Gaps = 23/357 (6%)
Query: 215 APADNTGPRAAPS-SPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEK 273
+P++ T A S S LCA+CGD A +HYG +C+GCKGFF+R+V+K Y C +
Sbjct: 32 SPSEGTNLNAPNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSR 91
Query: 274 SCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXL 333
C VD C GM KE V+ + R R+ L
Sbjct: 92 QCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNE-----RDRISTRRSSYEDSSLPSINAL 146
Query: 334 ITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKV 393
+ A V + TSP S + S +V L ++ +A+ +
Sbjct: 147 LQAEVLSRQITSP------VSGINGDIRAKKIASIADVCESMKEQLLVLVE----WAKYI 196
Query: 394 PGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR--SFGDW 451
P + +L +D+ L + E +L R+ + L N ++ R C
Sbjct: 197 PAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIV-PRHCPELAEMSRV 255
Query: 452 LHAVLD-FSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMP 509
+LD + ID + +A L A+ D GL +P ++++L+ ++ L ++
Sbjct: 256 SIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYI- 314
Query: 510 XXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASLP 566
F +L LP L+S++ Q +++I +KL + L++ M P
Sbjct: 315 -NDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEMLLGGSP 370
>X87870-1|CAA61133.1| 455|Homo sapiens Hepatocyte nuclear factor 4A
protein.
Length = 455
Score = 89.4 bits (212), Expect = 3e-17
Identities = 86/357 (24%), Positives = 145/357 (40%), Gaps = 23/357 (6%)
Query: 215 APADNTGPRAAPS-SPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEK 273
+P++ T A S S LCA+CGD A +HYG +C+GCKGFF+R+V+K Y C +
Sbjct: 32 SPSEGTNLNAPNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSR 91
Query: 274 SCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXL 333
C VD C GM KE V+ + R R+ L
Sbjct: 92 QCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNE-----RDRISTRRSSYEDSSLPSINAL 146
Query: 334 ITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKV 393
+ A V + TSP S + S +V L ++ +A+ +
Sbjct: 147 LQAEVLSRQITSP------VSGINGDIRAKKIASIADVCESMKEQLLVLVE----WAKYI 196
Query: 394 PGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR--SFGDW 451
P + +L +D+ L + E +L R+ + L N ++ R C
Sbjct: 197 PAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIV-PRHCPELAEMSRV 255
Query: 452 LHAVLD-FSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMP 509
+LD + ID + +A L A+ D GL +P ++++L+ ++ L ++
Sbjct: 256 SIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYI- 314
Query: 510 XXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASLP 566
F +L LP L+S++ Q +++I +KL + L++ M P
Sbjct: 315 -NDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEMLLGGSP 370
>X76930-1|CAA54248.1| 465|Homo sapiens hepatocyte nuclear factor 4
protein.
Length = 465
Score = 89.4 bits (212), Expect = 3e-17
Identities = 86/357 (24%), Positives = 145/357 (40%), Gaps = 23/357 (6%)
Query: 215 APADNTGPRAAPS-SPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEK 273
+P++ T A S S LCA+CGD A +HYG +C+GCKGFF+R+V+K Y C +
Sbjct: 32 SPSEGTNLNAPNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSR 91
Query: 274 SCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXL 333
C VD C GM KE V+ + R R+ L
Sbjct: 92 QCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNE-----RDRISTRRSSYEDSSLPSINAL 146
Query: 334 ITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKV 393
+ A V + TSP S + S +V L ++ +A+ +
Sbjct: 147 LQAEVLSRQITSP------VSGINGDIRAKKIASIADVCESMKEQLLVLVE----WAKYI 196
Query: 394 PGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR--SFGDW 451
P + +L +D+ L + E +L R+ + L N ++ R C
Sbjct: 197 PAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIV-PRHCPELAEMSRV 255
Query: 452 LHAVLD-FSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMP 509
+LD + ID + +A L A+ D GL +P ++++L+ ++ L ++
Sbjct: 256 SIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYI- 314
Query: 510 XXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASLP 566
F +L LP L+S++ Q +++I +KL + L++ M P
Sbjct: 315 -NDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEMLLGGSP 370
>DQ022681-1|AAY56401.1| 357|Homo sapiens nuclear receptor subfamily
1, group I, member 3 protein.
Length = 357
Score = 89.4 bits (212), Expect = 3e-17
Identities = 79/323 (24%), Positives = 133/323 (41%), Gaps = 21/323 (6%)
Query: 233 CAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXX 292
C VCGD A H+ TCEGCKGFF+RTV K C SC V
Sbjct: 11 CVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCPACRLQK 70
Query: 293 CLAVGMVKE-VVRTDSLKGRRGRLXXXXXXXX-XXXXXXXXXLITALVRAHVDTSPDFAN 350
CL GM K+ ++ ++L RR + LI L+ AH
Sbjct: 71 CLDAGMRKDMILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFE 130
Query: 351 LDYSQYREPS-------PLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPED 403
+ Q+R P+ PL L ++ F + T + + F + +P + L ED
Sbjct: 131 -QFVQFRPPAHLFIHHQPLPTLAPVLPLVTHFADINTFMVLQVIKFTKDLPVFRSLPIED 189
Query: 404 REQLFASARLEL--FVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRSFG---DWLHAVLDF 458
+ L A +E+ VL + + ++ + D + + G ++L + F
Sbjct: 190 QISLLKGAAVEICHIVLNTTFCLQTQNFLCGPLRYTIEDGARVSPTVGFQVEFLELLFHF 249
Query: 459 SNTLHSMDIDISTFACLCALTL------ITDRHGLKEPHRVEQLQMKIIGCLRAHMPXXX 512
TL + + + L A+ L +TDR G+ + ++QLQ ++ L++++
Sbjct: 250 HGTLRKLQLQEPEYVLLAAMALFSPAPYLTDRPGVTQRDEIDQLQEEMALTLQSYIKGQQ 309
Query: 513 XXXXXAPHFSRVLGALPELRSLS 535
++++LG L ELRS++
Sbjct: 310 RRPRDRFLYAKLLGLLAELRSIN 332
>AL132772-2|CAC01303.1| 474|Homo sapiens hepatocyte nuclear factor
4, alpha protein.
Length = 474
Score = 89.4 bits (212), Expect = 3e-17
Identities = 86/357 (24%), Positives = 145/357 (40%), Gaps = 23/357 (6%)
Query: 215 APADNTGPRAAPS-SPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEK 273
+P++ T A S S LCA+CGD A +HYG +C+GCKGFF+R+V+K Y C +
Sbjct: 41 SPSEGTNLNAPNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSR 100
Query: 274 SCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXL 333
C VD C GM KE V+ + R R+ L
Sbjct: 101 QCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNE-----RDRISTRRSSYEDSSLPSINAL 155
Query: 334 ITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKV 393
+ A V + TSP S + S +V L ++ +A+ +
Sbjct: 156 LQAEVLSRQITSP------VSGINGDIRAKKIASIADVCESMKEQLLVLVE----WAKYI 205
Query: 394 PGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR--SFGDW 451
P + +L +D+ L + E +L R+ + L N ++ R C
Sbjct: 206 PAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIV-PRHCPELAEMSRV 264
Query: 452 LHAVLD-FSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMP 509
+LD + ID + +A L A+ D GL +P ++++L+ ++ L ++
Sbjct: 265 SIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYI- 323
Query: 510 XXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRASLP 566
F +L LP L+S++ Q +++I +KL + L++ M P
Sbjct: 324 -NDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEMLLGGSP 379
>U93553-1|AAD03155.1| 500|Homo sapiens alpha1-fetoprotein
transcription factor protein.
Length = 500
Score = 89.0 bits (211), Expect = 4e-17
Identities = 37/84 (44%), Positives = 49/84 (58%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXX 290
+LC VCGD + HYG+ TCE CKGFFKRTVQ +Y C+ ++C +D
Sbjct: 44 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCRF 103
Query: 291 XXCLAVGMVKEVVRTDSLKGRRGR 314
CL+VGM E VR D ++G R +
Sbjct: 104 QKCLSVGMKLEAVRADRMRGGRNK 127
>U80251-1|AAC78727.1| 495|Homo sapiens hepatocytic transcription
factor protein.
Length = 495
Score = 89.0 bits (211), Expect = 4e-17
Identities = 37/84 (44%), Positives = 49/84 (58%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXX 290
+LC VCGD + HYG+ TCE CKGFFKRTVQ +Y C+ ++C +D
Sbjct: 38 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCRF 97
Query: 291 XXCLAVGMVKEVVRTDSLKGRRGR 314
CL+VGM E VR D ++G R +
Sbjct: 98 QKCLSVGMKLEAVRADRMRGGRNK 121
>BC118652-1|AAI18653.1| 495|Homo sapiens nuclear receptor subfamily
5, group A, member 2 protein.
Length = 495
Score = 89.0 bits (211), Expect = 4e-17
Identities = 37/84 (44%), Positives = 49/84 (58%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXX 290
+LC VCGD + HYG+ TCE CKGFFKRTVQ +Y C+ ++C +D
Sbjct: 38 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCRF 97
Query: 291 XXCLAVGMVKEVVRTDSLKGRRGR 314
CL+VGM E VR D ++G R +
Sbjct: 98 QKCLSVGMKLEAVRADRMRGGRNK 121
>BC118571-1|AAI18572.1| 495|Homo sapiens nuclear receptor subfamily
5, group A, member 2 protein.
Length = 495
Score = 89.0 bits (211), Expect = 4e-17
Identities = 37/84 (44%), Positives = 49/84 (58%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXX 290
+LC VCGD + HYG+ TCE CKGFFKRTVQ +Y C+ ++C +D
Sbjct: 38 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCRF 97
Query: 291 XXCLAVGMVKEVVRTDSLKGRRGR 314
CL+VGM E VR D ++G R +
Sbjct: 98 QKCLSVGMKLEAVRADRMRGGRNK 121
>AL031228-12|CAI95621.1| 262|Homo sapiens retinoid X receptor, beta
protein.
Length = 262
Score = 89.0 bits (211), Expect = 4e-17
Identities = 38/90 (42%), Positives = 52/90 (57%)
Query: 222 PRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXX 281
P P + +LCA+CGD ++ +HYGV +CEGCKGFFKRT++K Y C K C VD
Sbjct: 165 PPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQ 224
Query: 282 XXXXXXXXXXXCLAVGMVKEVVRTDSLKGR 311
CLA GM +E V+ + +G+
Sbjct: 225 RNRCQYCRYQKCLATGMKREAVQEERQRGK 254
>AF190464-2|AAG17124.1| 495|Homo sapiens hepatocytic transcription
factor B1F protein.
Length = 495
Score = 89.0 bits (211), Expect = 4e-17
Identities = 37/84 (44%), Positives = 49/84 (58%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXX 290
+LC VCGD + HYG+ TCE CKGFFKRTVQ +Y C+ ++C +D
Sbjct: 38 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCRF 97
Query: 291 XXCLAVGMVKEVVRTDSLKGRRGR 314
CL+VGM E VR D ++G R +
Sbjct: 98 QKCLSVGMKLEAVRADRMRGGRNK 121
>AF190464-1|AAG17125.1| 541|Homo sapiens hepatocytic transcription
factor isoform B1F-2 protein.
Length = 541
Score = 89.0 bits (211), Expect = 4e-17
Identities = 37/84 (44%), Positives = 49/84 (58%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXX 290
+LC VCGD + HYG+ TCE CKGFFKRTVQ +Y C+ ++C +D
Sbjct: 84 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCRF 143
Query: 291 XXCLAVGMVKEVVRTDSLKGRRGR 314
CL+VGM E VR D ++G R +
Sbjct: 144 QKCLSVGMKLEAVRADRMRGGRNK 167
>AF146343-1|AAD37378.1| 495|Homo sapiens CYP7A promoter binding
factor protein.
Length = 495
Score = 89.0 bits (211), Expect = 4e-17
Identities = 37/84 (44%), Positives = 49/84 (58%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXX 290
+LC VCGD + HYG+ TCE CKGFFKRTVQ +Y C+ ++C +D
Sbjct: 38 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCRF 97
Query: 291 XXCLAVGMVKEVVRTDSLKGRRGR 314
CL+VGM E VR D ++G R +
Sbjct: 98 QKCLSVGMKLEAVRADRMRGGRNK 121
>AF124247-1|AAD26565.1| 541|Homo sapiens hepatocytic transcription
factor hB1F-2 protein.
Length = 541
Score = 89.0 bits (211), Expect = 4e-17
Identities = 37/84 (44%), Positives = 49/84 (58%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXX 290
+LC VCGD + HYG+ TCE CKGFFKRTVQ +Y C+ ++C +D
Sbjct: 84 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCRF 143
Query: 291 XXCLAVGMVKEVVRTDSLKGRRGR 314
CL+VGM E VR D ++G R +
Sbjct: 144 QKCLSVGMKLEAVRADRMRGGRNK 167
>AF049102-1|AAD03248.1| 323|Homo sapiens alpha1-fetoprotein
transcription factor short variant protein.
Length = 323
Score = 89.0 bits (211), Expect = 4e-17
Identities = 37/84 (44%), Positives = 49/84 (58%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXX 290
+LC VCGD + HYG+ TCE CKGFFKRTVQ +Y C+ ++C +D
Sbjct: 4 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCRF 63
Query: 291 XXCLAVGMVKEVVRTDSLKGRRGR 314
CL+VGM E VR D ++G R +
Sbjct: 64 QKCLSVGMKLEAVRADRMRGGRNK 87
>AB019246-1|BAA34092.1| 541|Homo sapiens FTZ-F1 related protein
protein.
Length = 541
Score = 89.0 bits (211), Expect = 4e-17
Identities = 37/84 (44%), Positives = 49/84 (58%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXX 290
+LC VCGD + HYG+ TCE CKGFFKRTVQ +Y C+ ++C +D
Sbjct: 84 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCRF 143
Query: 291 XXCLAVGMVKEVVRTDSLKGRRGR 314
CL+VGM E VR D ++G R +
Sbjct: 144 QKCLSVGMKLEAVRADRMRGGRNK 167
>DQ923326-1|ABJ52966.1| 397|Homo sapiens orphan nuclear receptor
protein.
Length = 397
Score = 88.6 bits (210), Expect = 5e-17
Identities = 96/359 (26%), Positives = 153/359 (42%), Gaps = 33/359 (9%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEK-SCPVDXXXXXXXXXXX 289
Q+C VCGD A H+ V TCEGCKGFF+R +++ ++ C K +C +
Sbjct: 39 QICRVCGDKATGYHFNVMTCEGCKGFFRRAMKRNARLRCPFRKGACEITRKTRRQCQACR 98
Query: 290 XXXCLAVGMVKEVVRTDS--------LKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAH 341
CL GM KE++ +D +K ++ +I L+ A
Sbjct: 99 LRKCLESGMKKEMIMSDEAVEERRALIKRKKSERTGTQPLGVQGLTEEQRMMIRELMDAQ 158
Query: 342 V---DTS-PDFANLDYS-QYR-EPSPL---EPPMSDLEVIHQFYSLLTTSIDM------- 385
+ DT+ F N S Q R E + +PP + +SLL DM
Sbjct: 159 MKTFDTTFSHFKNFRVSLQLRGEDGSVWNYKPPADSGG--KEIFSLLPHMADMSTYMFKG 216
Query: 386 IKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ 445
I FA+ + + DL ED+ L A EL LR E T C L
Sbjct: 217 IISFAKVISYFRDLPIEDQISLLKGAAFELCQLRFNTVFNAE-TGTWECGRLSYCLEDTA 275
Query: 446 RSFGD-WLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMKIIGC 503
F L +L F L + + + + A++L + DR G+ + V+QLQ +
Sbjct: 276 GGFQQLLLEPMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAIT 335
Query: 504 LRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVP-APPLIENMF 561
L++++ F +++ L ELRS++ Q QR+ L+++D+ P A PL++ +F
Sbjct: 336 LKSYIECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRL--LRIQDIHPFATPLMQELF 392
>AF364606-3|AAK38721.1| 397|Homo sapiens orphan nuclear receptor
PXR.2 protein.
Length = 397
Score = 88.6 bits (210), Expect = 5e-17
Identities = 96/359 (26%), Positives = 153/359 (42%), Gaps = 33/359 (9%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEK-SCPVDXXXXXXXXXXX 289
Q+C VCGD A H+ V TCEGCKGFF+R +++ ++ C K +C +
Sbjct: 39 QICRVCGDKATGYHFNVMTCEGCKGFFRRAMKRNARLRCPFRKGACEITRKTRRQCQACR 98
Query: 290 XXXCLAVGMVKEVVRTDS--------LKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAH 341
CL GM KE++ +D +K ++ +I L+ A
Sbjct: 99 LRKCLESGMKKEMIMSDEAVEERRALIKRKKSERTGTQPLGVQGLTEEQRMMIRELMDAQ 158
Query: 342 V---DTS-PDFANLDYS-QYR-EPSPL---EPPMSDLEVIHQFYSLLTTSIDM------- 385
+ DT+ F N S Q R E + +PP + +SLL DM
Sbjct: 159 MKTFDTTFSHFKNFRVSLQLRGEDGSVWNYKPPADSGG--KEIFSLLPHMADMSTYMFKG 216
Query: 386 IKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ 445
I FA+ + + DL ED+ L A EL LR E T C L
Sbjct: 217 IISFAKVISYFRDLPIEDQISLLKGAAFELCQLRFNTVFNAE-TGTWECGRLSYCLEDTA 275
Query: 446 RSFGD-WLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMKIIGC 503
F L +L F L + + + + A++L + DR G+ + V+QLQ +
Sbjct: 276 GGFQQLLLEPMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAIT 335
Query: 504 LRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVP-APPLIENMF 561
L++++ F +++ L ELRS++ Q QR+ L+++D+ P A PL++ +F
Sbjct: 336 LKSYIECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRL--LRIQDIHPFATPLMQELF 392
>X87872-1|CAA61135.1| 408|Homo sapiens Hepatocyte nuclear factor 4C
protein.
Length = 408
Score = 88.2 bits (209), Expect = 7e-17
Identities = 85/351 (24%), Positives = 144/351 (41%), Gaps = 23/351 (6%)
Query: 215 APADNTGPRAAPS-SPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEK 273
+P++ T A S S LCA+CGD A +HYG +C+GCKGFF+R+V+K Y C +
Sbjct: 32 SPSEGTNLNAPNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSR 91
Query: 274 SCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXL 333
C VD C GM KE V+ + R R+ L
Sbjct: 92 QCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNE-----RDRISTRRSSYEDSSLPSINAL 146
Query: 334 ITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKV 393
+ A V + TSP S + S +V L ++ +A+ +
Sbjct: 147 LQAEVLSRQITSP------VSGINGDIRAKKIASIADVCESMKEQLLVLVE----WAKYI 196
Query: 394 PGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR--SFGDW 451
P + +L +D+ L + E +L R+ + L N ++ R C
Sbjct: 197 PAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIV-PRHCPELAEMSRV 255
Query: 452 LHAVLD-FSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMP 509
+LD + ID + +A L A+ D GL +P ++++L+ ++ L ++
Sbjct: 256 SIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYI- 314
Query: 510 XXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENM 560
F +L LP L+S++ Q +++I +KL + L++ M
Sbjct: 315 -NDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEM 364
>U72967-1|AAB48083.1| 408|Homo sapiens hepatocyte nuclear factor
4-alpha protein.
Length = 408
Score = 88.2 bits (209), Expect = 7e-17
Identities = 85/351 (24%), Positives = 144/351 (41%), Gaps = 23/351 (6%)
Query: 215 APADNTGPRAAPS-SPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEK 273
+P++ T A S S LCA+CGD A +HYG +C+GCKGFF+R+V+K Y C +
Sbjct: 32 SPSEGTNLNAPNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSR 91
Query: 274 SCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXL 333
C VD C GM KE V+ + R R+ L
Sbjct: 92 QCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNE-----RDRISTRRSSYEDSSLPSINAL 146
Query: 334 ITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKV 393
+ A V + TSP S + S +V L ++ +A+ +
Sbjct: 147 LQAEVLSRQITSP------VSGINGDIRAKKIASIADVCESMKEQLLVLVE----WAKYI 196
Query: 394 PGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR--SFGDW 451
P + +L +D+ L + E +L R+ + L N ++ R C
Sbjct: 197 PAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIV-PRHCPELAEMSRV 255
Query: 452 LHAVLD-FSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMP 509
+LD + ID + +A L A+ D GL +P ++++L+ ++ L ++
Sbjct: 256 SIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYI- 314
Query: 510 XXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENM 560
F +L LP L+S++ Q +++I +KL + L++ M
Sbjct: 315 -NDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEM 364
>AL132772-1|CAI18856.1| 417|Homo sapiens hepatocyte nuclear factor
4, alpha protein.
Length = 417
Score = 88.2 bits (209), Expect = 7e-17
Identities = 85/351 (24%), Positives = 144/351 (41%), Gaps = 23/351 (6%)
Query: 215 APADNTGPRAAPS-SPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEK 273
+P++ T A S S LCA+CGD A +HYG +C+GCKGFF+R+V+K Y C +
Sbjct: 41 SPSEGTNLNAPNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSR 100
Query: 274 SCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXL 333
C VD C GM KE V+ + R R+ L
Sbjct: 101 QCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNE-----RDRISTRRSSYEDSSLPSINAL 155
Query: 334 ITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKV 393
+ A V + TSP S + S +V L ++ +A+ +
Sbjct: 156 LQAEVLSRQITSP------VSGINGDIRAKKIASIADVCESMKEQLLVLVE----WAKYI 205
Query: 394 PGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR--SFGDW 451
P + +L +D+ L + E +L R+ + L N ++ R C
Sbjct: 206 PAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIV-PRHCPELAEMSRV 264
Query: 452 LHAVLD-FSNTLHSMDIDISTFACLCALTLI-TDRHGLKEPHRVEQLQMKIIGCLRAHMP 509
+LD + ID + +A L A+ D GL +P ++++L+ ++ L ++
Sbjct: 265 SIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYI- 323
Query: 510 XXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENM 560
F +L LP L+S++ Q +++I +KL + L++ M
Sbjct: 324 -NDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEM 373
>DQ777076-1|ABG88022.1| 474|Homo sapiens estrogen receptor beta 4
protein.
Length = 474
Score = 87.8 bits (208), Expect = 9e-17
Identities = 68/274 (24%), Positives = 114/274 (41%), Gaps = 17/274 (6%)
Query: 220 TGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDX 279
TGP + + CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 138 TGPGS--KRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDK 195
Query: 280 XXXXXXXXXXXXXCLAVGMVK----------EVVRTDSLKGRRGRLXXXXXXXXXXXXXX 329
C VGMVK +VR G +
Sbjct: 196 NRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSAGEQLHCAGKAKRSGGHAPRV 255
Query: 330 XXXLITALVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLF 389
L+ AL + + A + PS P ++ ++ L + + +
Sbjct: 256 RELLLDALSPEQLVLTLLEAEPPHVLISRPS---APFTEASMMMSLTKLADKELVHMISW 312
Query: 390 AEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQ--CQRS 447
A+K+PG+ +L D+ +L S +E+ ++ L +R+ KL F LVLD+ + C
Sbjct: 313 AKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDLVLDRDEGKCVEG 372
Query: 448 FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLI 481
+ +L ++ + + + C+ A+ L+
Sbjct: 373 ILEIFDMLLATTSRFRELKLQHKEYLCVKAMILL 406
>DQ838583-1|ABH09190.1| 472|Homo sapiens estrogen receptor beta
isoform 5 protein.
Length = 472
Score = 87.4 bits (207), Expect = 1e-16
Identities = 68/271 (25%), Positives = 114/271 (42%), Gaps = 11/271 (4%)
Query: 220 TGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDX 279
TGP + + CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 138 TGPGS--KRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDK 195
Query: 280 XXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGR--RGRLXXXXXXXXXXXXXXXXXLITAL 337
C VGMVK R + R R + +
Sbjct: 196 NRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHCAGKAKRSGGHAPRV 255
Query: 338 VRAHVDT-SPDFANLDYSQYREPSPL----EPPMSDLEVIHQFYSLLTTSIDMIKLFAEK 392
+D SP+ L + P L P ++ ++ L + + +A+K
Sbjct: 256 RELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTKLADKELVHMISWAKK 315
Query: 393 VPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQ--CQRSFGD 450
+PG+ +L D+ +L S +E+ ++ L +R+ KL F LVLD+ + C +
Sbjct: 316 IPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDLVLDRDEGKCVEGILE 375
Query: 451 WLHAVLDFSNTLHSMDIDISTFACLCALTLI 481
+L ++ + + + C+ A+ L+
Sbjct: 376 IFDMLLATTSRFRELKLQHKEYLCVKAMILL 406
>DQ838582-1|ABH09189.1| 481|Homo sapiens estrogen receptor beta
isoform 4 protein.
Length = 481
Score = 87.4 bits (207), Expect = 1e-16
Identities = 68/271 (25%), Positives = 114/271 (42%), Gaps = 11/271 (4%)
Query: 220 TGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDX 279
TGP + + CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 138 TGPGS--KRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDK 195
Query: 280 XXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGR--RGRLXXXXXXXXXXXXXXXXXLITAL 337
C VGMVK R + R R + +
Sbjct: 196 NRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHCAGKAKRSGGHAPRV 255
Query: 338 VRAHVDT-SPDFANLDYSQYREPSPL----EPPMSDLEVIHQFYSLLTTSIDMIKLFAEK 392
+D SP+ L + P L P ++ ++ L + + +A+K
Sbjct: 256 RELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTKLADKELVHMISWAKK 315
Query: 393 VPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQ--CQRSFGD 450
+PG+ +L D+ +L S +E+ ++ L +R+ KL F LVLD+ + C +
Sbjct: 316 IPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDLVLDRDEGKCVEGILE 375
Query: 451 WLHAVLDFSNTLHSMDIDISTFACLCALTLI 481
+L ++ + + + C+ A+ L+
Sbjct: 376 IFDMLLATTSRFRELKLQHKEYLCVKAMILL 406
>AF060555-1|AAC15234.1| 513|Homo sapiens estrogen receptor beta 3
isoform protein.
Length = 513
Score = 87.4 bits (207), Expect = 1e-16
Identities = 68/271 (25%), Positives = 114/271 (42%), Gaps = 11/271 (4%)
Query: 220 TGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDX 279
TGP + + CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 138 TGPGS--KRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDK 195
Query: 280 XXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGR--RGRLXXXXXXXXXXXXXXXXXLITAL 337
C VGMVK R + R R + +
Sbjct: 196 NRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHCAGKAKRSGGHAPRV 255
Query: 338 VRAHVDT-SPDFANLDYSQYREPSPL----EPPMSDLEVIHQFYSLLTTSIDMIKLFAEK 392
+D SP+ L + P L P ++ ++ L + + +A+K
Sbjct: 256 RELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTKLADKELVHMISWAKK 315
Query: 393 VPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQ--CQRSFGD 450
+PG+ +L D+ +L S +E+ ++ L +R+ KL F LVLD+ + C +
Sbjct: 316 IPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDLVLDRDEGKCVEGILE 375
Query: 451 WLHAVLDFSNTLHSMDIDISTFACLCALTLI 481
+L ++ + + + C+ A+ L+
Sbjct: 376 IFDMLLATTSRFRELKLQHKEYLCVKAMILL 406
>AF051428-1|AAC05751.1| 495|Homo sapiens estrogen receptor beta2
splice variant protein.
Length = 495
Score = 87.4 bits (207), Expect = 1e-16
Identities = 68/271 (25%), Positives = 114/271 (42%), Gaps = 11/271 (4%)
Query: 220 TGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDX 279
TGP + + CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 138 TGPGS--KRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDK 195
Query: 280 XXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGR--RGRLXXXXXXXXXXXXXXXXXLITAL 337
C VGMVK R + R R + +
Sbjct: 196 NRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHCAGKAKRSGGHAPRV 255
Query: 338 VRAHVDT-SPDFANLDYSQYREPSPL----EPPMSDLEVIHQFYSLLTTSIDMIKLFAEK 392
+D SP+ L + P L P ++ ++ L + + +A+K
Sbjct: 256 RELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTKLADKELVHMISWAKK 315
Query: 393 VPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQ--CQRSFGD 450
+PG+ +L D+ +L S +E+ ++ L +R+ KL F LVLD+ + C +
Sbjct: 316 IPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDLVLDRDEGKCVEGILE 375
Query: 451 WLHAVLDFSNTLHSMDIDISTFACLCALTLI 481
+L ++ + + + C+ A+ L+
Sbjct: 376 IFDMLLATTSRFRELKLQHKEYLCVKAMILL 406
>AB209620-1|BAD92857.1| 504|Homo sapiens estrogen receptor 2 (ER
beta) variant protein.
Length = 504
Score = 87.4 bits (207), Expect = 1e-16
Identities = 68/271 (25%), Positives = 114/271 (42%), Gaps = 11/271 (4%)
Query: 220 TGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDX 279
TGP + + CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 170 TGPGS--KRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDK 227
Query: 280 XXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGR--RGRLXXXXXXXXXXXXXXXXXLITAL 337
C VGMVK R + R R + +
Sbjct: 228 NRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHCAGKAKRSGGHAPRV 287
Query: 338 VRAHVDT-SPDFANLDYSQYREPSPL----EPPMSDLEVIHQFYSLLTTSIDMIKLFAEK 392
+D SP+ L + P L P ++ ++ L + + +A+K
Sbjct: 288 RELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTKLADKELVHMISWAKK 347
Query: 393 VPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQ--CQRSFGD 450
+PG+ +L D+ +L S +E+ ++ L +R+ KL F LVLD+ + C +
Sbjct: 348 IPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDLVLDRDEGKCVEGILE 407
Query: 451 WLHAVLDFSNTLHSMDIDISTFACLCALTLI 481
+L ++ + + + C+ A+ L+
Sbjct: 408 IFDMLLATTSRFRELKLQHKEYLCVKAMILL 438
>AB006589-1|BAA31966.1| 495|Homo sapiens estrogen receptor beta cx
protein.
Length = 495
Score = 87.4 bits (207), Expect = 1e-16
Identities = 68/271 (25%), Positives = 114/271 (42%), Gaps = 11/271 (4%)
Query: 220 TGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDX 279
TGP + + CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 138 TGPGS--KRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDK 195
Query: 280 XXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGR--RGRLXXXXXXXXXXXXXXXXXLITAL 337
C VGMVK R + R R + +
Sbjct: 196 NRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHCAGKAKRSGGHAPRV 255
Query: 338 VRAHVDT-SPDFANLDYSQYREPSPL----EPPMSDLEVIHQFYSLLTTSIDMIKLFAEK 392
+D SP+ L + P L P ++ ++ L + + +A+K
Sbjct: 256 RELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTKLADKELVHMISWAKK 315
Query: 393 VPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQ--CQRSFGD 450
+PG+ +L D+ +L S +E+ ++ L +R+ KL F LVLD+ + C +
Sbjct: 316 IPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDLVLDRDEGKCVEGILE 375
Query: 451 WLHAVLDFSNTLHSMDIDISTFACLCALTLI 481
+L ++ + + + C+ A+ L+
Sbjct: 376 IFDMLLATTSRFRELKLQHKEYLCVKAMILL 406
>U76388-1|AAB53105.1| 461|Homo sapiens steroidogenic factor 1
protein.
Length = 461
Score = 87.0 bits (206), Expect = 2e-16
Identities = 38/84 (45%), Positives = 46/84 (54%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXX 290
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C +SC +D
Sbjct: 11 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPFCRF 70
Query: 291 XXCLAVGMVKEVVRTDSLKGRRGR 314
CL VGM E VR D ++G R +
Sbjct: 71 QKCLTVGMRLEAVRADRMRGGRNK 94
>D88155-1|BAA13546.1| 461|Homo sapiens AdBP4 protein.
Length = 461
Score = 87.0 bits (206), Expect = 2e-16
Identities = 38/84 (45%), Positives = 46/84 (54%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXX 290
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C +SC +D
Sbjct: 11 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRNRCPFCRF 70
Query: 291 XXCLAVGMVKEVVRTDSLKGRRGR 314
CL VGM E VR D ++G R +
Sbjct: 71 QKCLTVGMRLEAVRADRMRGGRNK 94
>BC032501-1|AAH32501.1| 461|Homo sapiens nuclear receptor subfamily
5, group A, member 1 protein.
Length = 461
Score = 87.0 bits (206), Expect = 2e-16
Identities = 38/84 (45%), Positives = 46/84 (54%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXX 290
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C +SC +D
Sbjct: 11 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPFCRF 70
Query: 291 XXCLAVGMVKEVVRTDSLKGRRGR 314
CL VGM E VR D ++G R +
Sbjct: 71 QKCLTVGMRLEAVRADRMRGGRNK 94
>AL354979-3|CAI10959.1| 461|Homo sapiens nuclear receptor subfamily
5, group A, member 1 protein.
Length = 461
Score = 87.0 bits (206), Expect = 2e-16
Identities = 38/84 (45%), Positives = 46/84 (54%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXX 290
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C +SC +D
Sbjct: 11 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPFCRF 70
Query: 291 XXCLAVGMVKEVVRTDSLKGRRGR 314
CL VGM E VR D ++G R +
Sbjct: 71 QKCLTVGMRLEAVRADRMRGGRNK 94
>AL354979-2|CAI10958.1| 178|Homo sapiens nuclear receptor subfamily
5, group A, member 1 protein.
Length = 178
Score = 87.0 bits (206), Expect = 2e-16
Identities = 38/84 (45%), Positives = 46/84 (54%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXX 290
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C +SC +D
Sbjct: 11 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPFCRF 70
Query: 291 XXCLAVGMVKEVVRTDSLKGRRGR 314
CL VGM E VR D ++G R +
Sbjct: 71 QKCLTVGMRLEAVRADRMRGGRNK 94
>AL137846-2|CAI10872.1| 461|Homo sapiens nuclear receptor subfamily
5, group A, member 1 protein.
Length = 461
Score = 87.0 bits (206), Expect = 2e-16
Identities = 38/84 (45%), Positives = 46/84 (54%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXX 290
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C +SC +D
Sbjct: 11 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPFCRF 70
Query: 291 XXCLAVGMVKEVVRTDSLKGRRGR 314
CL VGM E VR D ++G R +
Sbjct: 71 QKCLTVGMRLEAVRADRMRGGRNK 94
>AJ009937-2|CAB55493.1| 420|Homo sapiens nuclear hormone receptor
PRR2-C protein.
Length = 420
Score = 86.6 bits (205), Expect = 2e-16
Identities = 95/359 (26%), Positives = 152/359 (42%), Gaps = 33/359 (9%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEK-SCPVDXXXXXXXXXXX 289
Q+C VCGD A H+ V TCEGCKGFF+R +++ ++ C K +C +
Sbjct: 62 QICRVCGDKATGYHFNVMTCEGCKGFFRRAMKRNARLRCPFRKGACEITRKTRRQCQACR 121
Query: 290 XXXCLAVGMVKEVVRTDS--------LKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAH 341
CL GM E++ +D +K ++ +I L+ A
Sbjct: 122 LRKCLESGMKNEMIMSDEAVEERRALIKRKKSERTGTQPLGVQGLTEEQRMMIRELMDAQ 181
Query: 342 V---DTS-PDFANLDYS-QYR-EPSPL---EPPMSDLEVIHQFYSLLTTSIDM------- 385
+ DT+ F N S Q R E + +PP + +SLL DM
Sbjct: 182 MKTFDTTFSHFKNFRVSLQLRGEDGSVWNYKPPADSGG--KEIFSLLPHMADMSTYMFKG 239
Query: 386 IKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ 445
I FA+ + + DL ED+ L A EL LR E T C L
Sbjct: 240 IISFAKVISYFRDLPIEDQISLLKGAAFELCQLRFNTVFNAE-TGTWECGRLSYCLEDTA 298
Query: 446 RSFGD-WLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMKIIGC 503
F L +L F L + + + + A++L + DR G+ + V+QLQ +
Sbjct: 299 GGFQQLLLEPMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAIT 358
Query: 504 LRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVP-APPLIENMF 561
L++++ F +++ L ELRS++ Q QR+ L+++D+ P A PL++ +F
Sbjct: 359 LKSYIECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRL--LRIQDIHPFATPLMQELF 415
>AJ009937-1|CAB55492.1| 397|Homo sapiens nuclear hormone receptor
PRR2-A protein.
Length = 397
Score = 86.6 bits (205), Expect = 2e-16
Identities = 95/359 (26%), Positives = 152/359 (42%), Gaps = 33/359 (9%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEK-SCPVDXXXXXXXXXXX 289
Q+C VCGD A H+ V TCEGCKGFF+R +++ ++ C K +C +
Sbjct: 39 QICRVCGDKATGYHFNVMTCEGCKGFFRRAMKRNARLRCPFRKGACEITRKTRRQCQACR 98
Query: 290 XXXCLAVGMVKEVVRTDS--------LKGRRGRLXXXXXXXXXXXXXXXXXLITALVRAH 341
CL GM E++ +D +K ++ +I L+ A
Sbjct: 99 LRKCLESGMKNEMIMSDEAVEERRALIKRKKSERTGTQPLGVQGLTEEQRMMIRELMDAQ 158
Query: 342 V---DTS-PDFANLDYS-QYR-EPSPL---EPPMSDLEVIHQFYSLLTTSIDM------- 385
+ DT+ F N S Q R E + +PP + +SLL DM
Sbjct: 159 MKTFDTTFSHFKNFRVSLQLRGEDGSVWNYKPPADSGG--KEIFSLLPHMADMSTYMFKG 216
Query: 386 IKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQ 445
I FA+ + + DL ED+ L A EL LR E T C L
Sbjct: 217 IISFAKVISYFRDLPIEDQISLLKGAAFELCQLRFNTVFNAE-TGTWECGRLSYCLEDTA 275
Query: 446 RSFGD-WLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMKIIGC 503
F L +L F L + + + + A++L + DR G+ + V+QLQ +
Sbjct: 276 GGFQQLLLEPMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAIT 335
Query: 504 LRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVP-APPLIENMF 561
L++++ F +++ L ELRS++ Q QR+ L+++D+ P A PL++ +F
Sbjct: 336 LKSYIECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRL--LRIQDIHPFATPLMQELF 392
>AC016543-1|AAG29619.1| 262|Homo sapiens hERRB2 protein.
Length = 262
Score = 84.6 bits (200), Expect = 8e-16
Identities = 38/84 (45%), Positives = 47/84 (55%)
Query: 229 PSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXX 288
P +LC VCGD A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 99 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 158
Query: 289 XXXXCLAVGMVKEVVRTDSLKGRR 312
CL VGM+KE VR D ++G R
Sbjct: 159 RFMKCLKVGMLKEGVRLDRVRGGR 182
>Y13276-1|CAA73725.1| 385|Homo sapiens Tailless protein protein.
Length = 385
Score = 83.8 bits (198), Expect = 1e-15
Identities = 92/370 (24%), Positives = 149/370 (40%), Gaps = 40/370 (10%)
Query: 233 CAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLA--EKSCPVDXXXXXXXXXXXX 290
C VCGD ++ +HYGV C+GC GFFKR++++ YVC + + CPVD
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRL 75
Query: 291 XXCLAVGMVKEVV------RTDSLKGR-----RG-RLXXXXXXXXXXXXXXXXXLITALV 338
CL V M K+ V RT +++ + RG + TA+
Sbjct: 76 KKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAALPAPAFFTAVT 135
Query: 339 R--------AHVDTSPDFANLDYSQYREPSPLEP------PMSDLEVIHQFYSLLTTSID 384
+ A V T+P+ L +P+P P PM EV + +
Sbjct: 136 QLEPHGLELAAVSTTPERQTL--VSLAQPTPKYPHEVNGTPMYLYEVATESVCESAARLL 193
Query: 385 MIKL-FAEKVPGYGDLCPEDREQLFASARLELFVLRLA-YRTRLEDTKLTFCNGLVLDKR 442
+ + +A+ VP + L +D+ L A ELFVL +A + ++ L +G+ D
Sbjct: 194 FMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDNT 253
Query: 443 QCQR--SFGDWLHAVLDFSNTLHSMDIDISTFACL-CALTL-ITDRHGLKEPHRVEQLQM 498
Q+ + A+ + + +D + FACL C +T H E
Sbjct: 254 DSQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAA 313
Query: 499 KIIGCLRAHMPXXXXXXXXAP----HFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAP 554
A + P F ++L LP LRS+S ++ +F K VP
Sbjct: 314 IAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPIT 373
Query: 555 PLIENMFRAS 564
L+ +M+++S
Sbjct: 374 RLLSDMYKSS 383
>BC028031-1|AAH28031.1| 385|Homo sapiens nuclear receptor subfamily
2, group E, member 1 protein.
Length = 385
Score = 83.8 bits (198), Expect = 1e-15
Identities = 92/370 (24%), Positives = 149/370 (40%), Gaps = 40/370 (10%)
Query: 233 CAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLA--EKSCPVDXXXXXXXXXXXX 290
C VCGD ++ +HYGV C+GC GFFKR++++ YVC + + CPVD
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRL 75
Query: 291 XXCLAVGMVKEVV------RTDSLKGR-----RG-RLXXXXXXXXXXXXXXXXXLITALV 338
CL V M K+ V RT +++ + RG + TA+
Sbjct: 76 KKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAALPAPAFFTAVT 135
Query: 339 R--------AHVDTSPDFANLDYSQYREPSPLEP------PMSDLEVIHQFYSLLTTSID 384
+ A V T+P+ L +P+P P PM EV + +
Sbjct: 136 QLEPHGLELAAVSTTPERQTL--VSLAQPTPKYPHEVNGTPMYLYEVATESVCESAARLL 193
Query: 385 MIKL-FAEKVPGYGDLCPEDREQLFASARLELFVLRLA-YRTRLEDTKLTFCNGLVLDKR 442
+ + +A+ VP + L +D+ L A ELFVL +A + ++ L +G+ D
Sbjct: 194 FMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDNT 253
Query: 443 QCQR--SFGDWLHAVLDFSNTLHSMDIDISTFACL-CALTL-ITDRHGLKEPHRVEQLQM 498
Q+ + A+ + + +D + FACL C +T H E
Sbjct: 254 DSQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAA 313
Query: 499 KIIGCLRAHMPXXXXXXXXAP----HFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAP 554
A + P F ++L LP LRS+S ++ +F K VP
Sbjct: 314 IAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPIT 373
Query: 555 PLIENMFRAS 564
L+ +M+++S
Sbjct: 374 RLLSDMYKSS 383
>AL078596-1|CAB75626.1| 385|Homo sapiens nuclear receptor subfamily
2, group E, member 1 protein.
Length = 385
Score = 83.8 bits (198), Expect = 1e-15
Identities = 92/370 (24%), Positives = 149/370 (40%), Gaps = 40/370 (10%)
Query: 233 CAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLA--EKSCPVDXXXXXXXXXXXX 290
C VCGD ++ +HYGV C+GC GFFKR++++ YVC + + CPVD
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRL 75
Query: 291 XXCLAVGMVKEVV------RTDSLKGR-----RG-RLXXXXXXXXXXXXXXXXXLITALV 338
CL V M K+ V RT +++ + RG + TA+
Sbjct: 76 KKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAALPAPAFFTAVT 135
Query: 339 R--------AHVDTSPDFANLDYSQYREPSPLEP------PMSDLEVIHQFYSLLTTSID 384
+ A V T+P+ L +P+P P PM EV + +
Sbjct: 136 QLEPHGLELAAVSTTPERQTL--VSLAQPTPKYPHEVNGTPMYLYEVATESVCESAARLL 193
Query: 385 MIKL-FAEKVPGYGDLCPEDREQLFASARLELFVLRLA-YRTRLEDTKLTFCNGLVLDKR 442
+ + +A+ VP + L +D+ L A ELFVL +A + ++ L +G+ D
Sbjct: 194 FMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDNT 253
Query: 443 QCQR--SFGDWLHAVLDFSNTLHSMDIDISTFACL-CALTL-ITDRHGLKEPHRVEQLQM 498
Q+ + A+ + + +D + FACL C +T H E
Sbjct: 254 DSQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAA 313
Query: 499 KIIGCLRAHMPXXXXXXXXAP----HFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAP 554
A + P F ++L LP LRS+S ++ +F K VP
Sbjct: 314 IAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPIT 373
Query: 555 PLIENMFRAS 564
L+ +M+++S
Sbjct: 374 RLLSDMYKSS 383
>AK131541-1|BAD18677.1| 422|Homo sapiens protein ( Homo sapiens
cDNA FLJ16774 fis, clone BRCAN2019772, highly similar
to Orphan nuclear receptor NR2E1. ).
Length = 422
Score = 83.8 bits (198), Expect = 1e-15
Identities = 92/370 (24%), Positives = 149/370 (40%), Gaps = 40/370 (10%)
Query: 233 CAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLA--EKSCPVDXXXXXXXXXXXX 290
C VCGD ++ +HYGV C+GC GFFKR++++ YVC + + CPVD
Sbjct: 53 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRL 112
Query: 291 XXCLAVGMVKEVV------RTDSLKGR-----RG-RLXXXXXXXXXXXXXXXXXLITALV 338
CL V M K+ V RT +++ + RG + TA+
Sbjct: 113 KKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAALPAPAFFTAVT 172
Query: 339 R--------AHVDTSPDFANLDYSQYREPSPLEP------PMSDLEVIHQFYSLLTTSID 384
+ A V T+P+ L +P+P P PM EV + +
Sbjct: 173 QLEPHGLELAAVSTTPERQTL--VSLAQPTPKYPHEVNGTPMYLYEVATESVCESAARLL 230
Query: 385 MIKL-FAEKVPGYGDLCPEDREQLFASARLELFVLRLA-YRTRLEDTKLTFCNGLVLDKR 442
+ + +A+ VP + L +D+ L A ELFVL +A + ++ L +G+ D
Sbjct: 231 FMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDNT 290
Query: 443 QCQR--SFGDWLHAVLDFSNTLHSMDIDISTFACL-CALTL-ITDRHGLKEPHRVEQLQM 498
Q+ + A+ + + +D + FACL C +T H E
Sbjct: 291 DSQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAA 350
Query: 499 KIIGCLRAHMPXXXXXXXXAP----HFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAP 554
A + P F ++L LP LRS+S ++ +F K VP
Sbjct: 351 IAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPIT 410
Query: 555 PLIENMFRAS 564
L+ +M+++S
Sbjct: 411 RLLSDMYKSS 420
>AF411525-1|AAL05871.1| 385|Homo sapiens nuclear receptor subfamily
2 group E member 1 protein.
Length = 385
Score = 83.8 bits (198), Expect = 1e-15
Identities = 92/370 (24%), Positives = 149/370 (40%), Gaps = 40/370 (10%)
Query: 233 CAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLA--EKSCPVDXXXXXXXXXXXX 290
C VCGD ++ +HYGV C+GC GFFKR++++ YVC + + CPVD
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRL 75
Query: 291 XXCLAVGMVKEVV------RTDSLKGR-----RG-RLXXXXXXXXXXXXXXXXXLITALV 338
CL V M K+ V RT +++ + RG + TA+
Sbjct: 76 KKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAALPAPAFFTAVT 135
Query: 339 R--------AHVDTSPDFANLDYSQYREPSPLEP------PMSDLEVIHQFYSLLTTSID 384
+ A V T+P+ L +P+P P PM EV + +
Sbjct: 136 QLEPHGLELAAVSTTPERQTL--VSLAQPTPKYPHEVNGTPMYLYEVATESVCESAARLL 193
Query: 385 MIKL-FAEKVPGYGDLCPEDREQLFASARLELFVLRLA-YRTRLEDTKLTFCNGLVLDKR 442
+ + +A+ VP + L +D+ L A ELFVL +A + ++ L +G+ D
Sbjct: 194 FMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDNT 253
Query: 443 QCQR--SFGDWLHAVLDFSNTLHSMDIDISTFACL-CALTL-ITDRHGLKEPHRVEQLQM 498
Q+ + A+ + + +D + FACL C +T H E
Sbjct: 254 DSQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAA 313
Query: 499 KIIGCLRAHMPXXXXXXXXAP----HFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAP 554
A + P F ++L LP LRS+S ++ +F K VP
Sbjct: 314 IAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPIT 373
Query: 555 PLIENMFRAS 564
L+ +M+++S
Sbjct: 374 RLLSDMYKSS 383
>AF220532-1|AAG31945.1| 385|Homo sapiens orphan nuclear receptor
protein.
Length = 385
Score = 83.8 bits (198), Expect = 1e-15
Identities = 92/370 (24%), Positives = 149/370 (40%), Gaps = 40/370 (10%)
Query: 233 CAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLA--EKSCPVDXXXXXXXXXXXX 290
C VCGD ++ +HYGV C+GC GFFKR++++ YVC + + CPVD
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRL 75
Query: 291 XXCLAVGMVKEVV------RTDSLKGR-----RG-RLXXXXXXXXXXXXXXXXXLITALV 338
CL V M K+ V RT +++ + RG + TA+
Sbjct: 76 KKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAALPAPAFFTAVT 135
Query: 339 R--------AHVDTSPDFANLDYSQYREPSPLEP------PMSDLEVIHQFYSLLTTSID 384
+ A V T+P+ L +P+P P PM EV + +
Sbjct: 136 QLEPHGLELAAVSTTPERQTL--VSLAQPTPKYPHEVNGTPMYLYEVATESVCESAARLL 193
Query: 385 MIKL-FAEKVPGYGDLCPEDREQLFASARLELFVLRLA-YRTRLEDTKLTFCNGLVLDKR 442
+ + +A+ VP + L +D+ L A ELFVL +A + ++ L +G+ D
Sbjct: 194 FMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDNT 253
Query: 443 QCQR--SFGDWLHAVLDFSNTLHSMDIDISTFACL-CALTL-ITDRHGLKEPHRVEQLQM 498
Q+ + A+ + + +D + FACL C +T H E
Sbjct: 254 DSQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAA 313
Query: 499 KIIGCLRAHMPXXXXXXXXAP----HFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAP 554
A + P F ++L LP LRS+S ++ +F K VP
Sbjct: 314 IAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPIT 373
Query: 555 PLIENMFRAS 564
L+ +M+++S
Sbjct: 374 RLLSDMYKSS 383
>AY572819-1|AAT47172.1| 321|Homo sapiens constitutive androstane
receptor SV14 protein.
Length = 321
Score = 82.2 bits (194), Expect = 4e-15
Identities = 71/291 (24%), Positives = 119/291 (40%), Gaps = 16/291 (5%)
Query: 233 CAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXX 292
C VCGD A H+ TCEGCKGFF+RTV K C SC V
Sbjct: 11 CVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCPACRLQK 70
Query: 293 CLAVGMVKE-VVRTDSLKGRRGRLXXXXXXXX-XXXXXXXXXLITALVRAHVDTSPDFAN 350
CL GM K+ ++ ++L RR + LI L+ AH
Sbjct: 71 CLDAGMRKDMILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFE 130
Query: 351 LDYSQYREPS-------PLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPED 403
+ Q+R P+ PL L ++ F + T + + F + +P + L ED
Sbjct: 131 -QFVQFRPPAHLFIHHQPLPTLAPVLPLVTHFADINTFMVLQVIKFTKDLPVFRSLPIED 189
Query: 404 REQLFASARLEL--FVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRSFG---DWLHAVLDF 458
+ L A +E+ VL + + ++ + D + + G ++L + F
Sbjct: 190 QISLLKGAAVEICHIVLNTTFCLQTQNFLCGPLRYTIEDGARVSPTVGFQVEFLELLFHF 249
Query: 459 SNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMKIIGCLRAHM 508
TL + + + L A+ L + DR G+ + ++QLQ ++ L++++
Sbjct: 250 HGTLRKLQLQEPEYVLLAAMALFSPDRPGVTQRDEIDQLQEEMALTLQSYI 300
>X12794-1|CAA31282.1| 403|Homo sapiens protein ( Human v-erbA
related ear-2 gene. ).
Length = 403
Score = 80.2 bits (189), Expect = 2e-14
Identities = 37/99 (37%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 206 NSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS 265
+ ++S PG A G P C VCGD ++ +HYGV TCEGCK FFKRT+++
Sbjct: 30 DDSASPPGAASDAEPGDEERPGLQVD-CVVCGDKSSGKHYGVFTCEGCKSFFKRTIRRNL 88
Query: 266 KYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVR 304
Y C + + C +D C VGM KE V+
Sbjct: 89 SYTCRSNRDCQIDQHHRNQCQYCRLKKCFRVGMRKEAVQ 127
>L31785-1|AAA65937.1| 579|Homo sapiens orphan nuclear hormone
receptor BD73 protein.
Length = 579
Score = 80.2 bits (189), Expect = 2e-14
Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 17/152 (11%)
Query: 165 AEQAARQRRSSLPVQRSESNS-SNDSPK----------LHGTRVHCMQPSTPNSASSSPG 213
+E + + SS+P + SNS +N +PK L R+ C S S SS+PG
Sbjct: 28 SENSFQSSSSSVPSSPNSSNSDTNGNPKNGDLANIEGILKNDRIDC---SMKTSKSSAPG 84
Query: 214 VAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKY-VCLAE 272
+ + + + S LC VCGD A+ HYGV CEGCKGFF+R++Q+ +Y CL
Sbjct: 85 MTKSHSGVTKF--SGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKN 142
Query: 273 KSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVR 304
++C + CL+VGM ++ VR
Sbjct: 143 ENCSIMRMNRNRCQQCRFKKCLSVGMSRDAVR 174
Score = 66.9 bits (156), Expect = 2e-10
Identities = 48/189 (25%), Positives = 92/189 (48%), Gaps = 5/189 (2%)
Query: 362 LEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLA 421
++P S E+ +F T ++ + FA+++PG+ DL D+ L + E+ ++R A
Sbjct: 391 VDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRFA 450
Query: 422 YRTRLEDTKLTFCNGLVLDKRQC-QRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTL 480
++ +TF +G GD L+++ +FS L+++ + + A+ L
Sbjct: 451 SLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSDEEMSLFTAVVL 510
Query: 481 IT-DRHG-LKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQG 538
++ DR G K + VE LQ +I LR + A F+++L LP+LRSL+
Sbjct: 511 VSADRSGNRKNVNSVEALQETLIRALRTLI--MKNHPNEASIFTKLLLKLPDLRSLNNMH 568
Query: 539 LQRIFSLKL 547
+ + + K+
Sbjct: 569 SEELLAFKV 577
>D16815-1|BAA20088.1| 579|Homo sapiens EAR-1r protein.
Length = 579
Score = 80.2 bits (189), Expect = 2e-14
Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 17/152 (11%)
Query: 165 AEQAARQRRSSLPVQRSESNS-SNDSPK----------LHGTRVHCMQPSTPNSASSSPG 213
+E + + SS+P + SNS +N +PK L R+ C S S SS+PG
Sbjct: 29 SENSFQSSSSSVPSSPNSSNSDTNGNPKNGDLANIEGILKNDRIDC---SMKTSKSSAPG 85
Query: 214 VAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKY-VCLAE 272
+ + + + S LC VCGD A+ HYGV CEGCKGFF+R++Q+ +Y CL
Sbjct: 86 MTKSHSGVTKF--SGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKN 143
Query: 273 KSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVR 304
++C + CL+VGM ++ VR
Sbjct: 144 ENCSIMRMNRNRCQQCRFKKCLSVGMSRDAVR 175
Score = 71.3 bits (167), Expect = 8e-12
Identities = 47/188 (25%), Positives = 93/188 (49%), Gaps = 4/188 (2%)
Query: 362 LEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLA 421
++P S E+ +F T ++ + FA+++PG+ DL D+ L + E+ ++R A
Sbjct: 392 VDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRFA 451
Query: 422 YRTRLEDTKLTFCNGLVLDKRQC-QRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTL 480
++ +TF +G GD L+++ +FS L+++ + + A+ L
Sbjct: 452 SLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSDEEMSLFTAVVL 511
Query: 481 IT-DRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGL 539
++ DR G++ + VE LQ +I LR + A F+++L LP+LRSL+
Sbjct: 512 VSADRSGIENVNSVEALQETLIRALRTLI--MKNHPNEASIFTKLLLKLPDLRSLNNMHS 569
Query: 540 QRIFSLKL 547
+ + + K+
Sbjct: 570 EELLAFKV 577
>BC070035-1|AAH70035.1| 408|Homo sapiens NR1D2 protein protein.
Length = 408
Score = 80.2 bits (189), Expect = 2e-14
Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 17/152 (11%)
Query: 165 AEQAARQRRSSLPVQRSESNS-SNDSPK----------LHGTRVHCMQPSTPNSASSSPG 213
+E + + SS+P + SNS +N +PK L R+ C S S SS+PG
Sbjct: 29 SENSFQSSSSSVPSSPNSSNSDTNGNPKNGDLANIEGILKNDRIDC---SMKTSKSSAPG 85
Query: 214 VAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKY-VCLAE 272
+ + + + S LC VCGD A+ HYGV CEGCKGFF+R++Q+ +Y CL
Sbjct: 86 MTKSHSGVTKF--SGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKN 143
Query: 273 KSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVR 304
++C + CL+VGM ++ VR
Sbjct: 144 ENCSIMRMNRNRCQQCRFKKCLSVGMSRDAVR 175
>BC045613-1|AAH45613.1| 579|Homo sapiens nuclear receptor subfamily
1, group D, member 2 protein.
Length = 579
Score = 80.2 bits (189), Expect = 2e-14
Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 17/152 (11%)
Query: 165 AEQAARQRRSSLPVQRSESNS-SNDSPK----------LHGTRVHCMQPSTPNSASSSPG 213
+E + + SS+P + SNS +N +PK L R+ C S S SS+PG
Sbjct: 29 SENSFQSSSSSVPSSPNSSNSDTNGNPKNGDLANIEGILKNDRIDC---SMKTSKSSAPG 85
Query: 214 VAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKY-VCLAE 272
+ + + + S LC VCGD A+ HYGV CEGCKGFF+R++Q+ +Y CL
Sbjct: 86 MTKSHSGVTKF--SGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKN 143
Query: 273 KSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVR 304
++C + CL+VGM ++ VR
Sbjct: 144 ENCSIMRMNRNRCQQCRFKKCLSVGMSRDAVR 175
Score = 71.3 bits (167), Expect = 8e-12
Identities = 47/188 (25%), Positives = 93/188 (49%), Gaps = 4/188 (2%)
Query: 362 LEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLA 421
++P S E+ +F T ++ + FA+++PG+ DL D+ L + E+ ++R A
Sbjct: 392 VDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRFA 451
Query: 422 YRTRLEDTKLTFCNGLVLDKRQC-QRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTL 480
++ +TF +G GD L+++ +FS L+++ + + A+ L
Sbjct: 452 SLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSDEEMSLFTAVVL 511
Query: 481 IT-DRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGL 539
++ DR G++ + VE LQ +I LR + A F+++L LP+LRSL+
Sbjct: 512 VSADRSGIENVNSVEALQETLIRALRTLI--MKNHPNEASIFTKLLLKLPDLRSLNNMHS 569
Query: 540 QRIFSLKL 547
+ + + K+
Sbjct: 570 EELLAFKV 577
>CR457434-1|CAG33715.1| 579|Homo sapiens NR1D2 protein.
Length = 579
Score = 79.8 bits (188), Expect = 2e-14
Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 17/152 (11%)
Query: 165 AEQAARQRRSSLPVQRSESNSS-NDSPK----------LHGTRVHCMQPSTPNSASSSPG 213
+E + + SS+P + SNS N +PK L R+ C S S SS+PG
Sbjct: 29 SENSFQSSSSSVPSSPNSSNSDINGNPKNGDLANIEGILKNDRIDC---SMKTSKSSAPG 85
Query: 214 VAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKY-VCLAE 272
+ + + + S LC VCGD A+ HYGV CEGCKGFF+R++Q+ +Y CL
Sbjct: 86 MTKSHSGVTKF--SGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKN 143
Query: 273 KSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVR 304
++C + CL+VGM ++ VR
Sbjct: 144 ENCSIMRMNRNRCQQCRFKKCLSVGMSRDAVR 175
Score = 71.3 bits (167), Expect = 8e-12
Identities = 47/188 (25%), Positives = 93/188 (49%), Gaps = 4/188 (2%)
Query: 362 LEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLA 421
++P S E+ +F T ++ + FA+++PG+ DL D+ L + E+ ++R A
Sbjct: 392 VDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRFA 451
Query: 422 YRTRLEDTKLTFCNGLVLDKRQC-QRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTL 480
++ +TF +G GD L+++ +FS L+++ + + A+ L
Sbjct: 452 SLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSDEEMSLFTAVVL 511
Query: 481 IT-DRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGL 539
++ DR G++ + VE LQ +I LR + A F+++L LP+LRSL+
Sbjct: 512 VSADRSGIENVNSVEALQETLIRALRTLI--MKNHPNEASIFTKLLLKLPDLRSLNNMHS 569
Query: 540 QRIFSLKL 547
+ + + K+
Sbjct: 570 EELLAFKV 577
>AY572806-1|AAT47159.1| 322|Homo sapiens constitutive androstane
receptor SV1 protein.
Length = 322
Score = 79.8 bits (188), Expect = 2e-14
Identities = 75/293 (25%), Positives = 119/293 (40%), Gaps = 19/293 (6%)
Query: 233 CAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXX 292
C VCGD A H+ TCEGCKGFF+RTV K C SC V
Sbjct: 11 CVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCPACRLQK 70
Query: 293 CLAVGMVKE-VVRTDSLKGRRGRLXXXXXXXX-XXXXXXXXXLITALVRAHVDTSPDFAN 350
CL GM K+ ++ ++L RR + LI L+ AH
Sbjct: 71 CLDAGMRKDMILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFE 130
Query: 351 LDYSQYREPS-------PLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPED 403
+ Q+R P+ PL L ++ F + T + + F + +P + L ED
Sbjct: 131 -QFVQFRPPAHLFIHHQPLPTLAPVLPLVTHFADINTFMVLQVIKFTKDLPVFRSLPIED 189
Query: 404 REQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQR-SFG-DWLHAVLDFSNT 461
+ L A +E+ + L L+ T+ C L R F ++L + F T
Sbjct: 190 QISLLKGAAVEICHIVLNTTFCLQ-TQNFLCGPLRYTIEDGARVGFQVEFLELLFHFHGT 248
Query: 462 LHSMDIDISTFACLCALTL------ITDRHGLKEPHRVEQLQMKIIGCLRAHM 508
L + + + L A+ L +TDR G+ + ++QLQ ++ L++++
Sbjct: 249 LRKLQLQEPEYVLLAAMALFSPAPYLTDRPGVTQRDEIDQLQEEMALTLQSYI 301
>AF012304-1|AAC33511.1| 194|Homo sapiens nuclear mitotic apparatus
protein-retinoic acid receptor alpha fusion protein
protein.
Length = 194
Score = 79.4 bits (187), Expect = 3e-14
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 202 PSTPNSASSSPGVAPADNTGPRAAPSSPS--QLCAVCGDTAACQHYGVRTCEGCKGFFKR 259
P+ +SSS + P+ P + P P + C VC D ++ HYGV CEGCKGFF+R
Sbjct: 63 PAIETQSSSSEEIVPS----PPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRR 118
Query: 260 TVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRR 312
++QK Y C +K+C ++ C VGM KE VR D K ++
Sbjct: 119 SIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKK 171
>X03348-1|CAA27054.1| 742|Homo sapiens beta-glucocorticoid receptor
protein.
Length = 742
Score = 79.0 bits (186), Expect = 4e-14
Identities = 67/302 (22%), Positives = 117/302 (38%), Gaps = 7/302 (2%)
Query: 206 NSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS 265
+S S P V+ ++ A P +LC VC D A+ HYGV TC CK FFKR V+
Sbjct: 394 SSPSMRPDVSSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQH 453
Query: 266 KYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXX 325
Y+C C +D CL GM E +T K + +
Sbjct: 454 NYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKK-KIKGIQQATTGVSQETS 512
Query: 326 XXXXXXXLITALVRAHVDTSPDFAN-LDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSID 384
++ A + T ++ P S ++ L +
Sbjct: 513 ENPGNKTIVPATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVI 572
Query: 385 MIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTK--LTFCNGLVL-DK 441
+A+ +PG+ +L +D+ L + + L L +R+ + + L F L++ ++
Sbjct: 573 AAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQ 632
Query: 442 RQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLITD--RHGLKEPHRVEQLQMK 499
R D +L S+ LH + + + C+ L L++ + GLK ++++M
Sbjct: 633 RMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIRMT 692
Query: 500 II 501
I
Sbjct: 693 YI 694
>X03225-1|CAA26976.1| 777|Homo sapiens alpha-glucocorticoid
receptor protein.
Length = 777
Score = 79.0 bits (186), Expect = 4e-14
Identities = 67/302 (22%), Positives = 117/302 (38%), Gaps = 7/302 (2%)
Query: 206 NSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS 265
+S S P V+ ++ A P +LC VC D A+ HYGV TC CK FFKR V+
Sbjct: 394 SSPSMRPDVSSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQH 453
Query: 266 KYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXX 325
Y+C C +D CL GM E +T K + +
Sbjct: 454 NYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKK-KIKGIQQATTGVSQETS 512
Query: 326 XXXXXXXLITALVRAHVDTSPDFAN-LDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSID 384
++ A + T ++ P S ++ L +
Sbjct: 513 ENPGNKTIVPATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVI 572
Query: 385 MIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTK--LTFCNGLVL-DK 441
+A+ +PG+ +L +D+ L + + L L +R+ + + L F L++ ++
Sbjct: 573 AAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQ 632
Query: 442 RQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLITD--RHGLKEPHRVEQLQMK 499
R D +L S+ LH + + + C+ L L++ + GLK ++++M
Sbjct: 633 RMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIRMT 692
Query: 500 II 501
I
Sbjct: 693 YI 694
>U80947-1|AAB64354.1| 742|Homo sapiens glucocorticoid receptor beta
protein.
Length = 742
Score = 79.0 bits (186), Expect = 4e-14
Identities = 67/302 (22%), Positives = 117/302 (38%), Gaps = 7/302 (2%)
Query: 206 NSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS 265
+S S P V+ ++ A P +LC VC D A+ HYGV TC CK FFKR V+
Sbjct: 394 SSPSMRPDVSSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQH 453
Query: 266 KYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXX 325
Y+C C +D CL GM E +T K + +
Sbjct: 454 NYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKK-KIKGIQQATTGVSQETS 512
Query: 326 XXXXXXXLITALVRAHVDTSPDFAN-LDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSID 384
++ A + T ++ P S ++ L +
Sbjct: 513 ENPGNKTIVPATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVI 572
Query: 385 MIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTK--LTFCNGLVL-DK 441
+A+ +PG+ +L +D+ L + + L L +R+ + + L F L++ ++
Sbjct: 573 AAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQ 632
Query: 442 RQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLITD--RHGLKEPHRVEQLQMK 499
R D +L S+ LH + + + C+ L L++ + GLK ++++M
Sbjct: 633 RMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIRMT 692
Query: 500 II 501
I
Sbjct: 693 YI 694
>U80946-1|AAB64353.1| 777|Homo sapiens glucocorticoid receptor
alpha protein.
Length = 777
Score = 79.0 bits (186), Expect = 4e-14
Identities = 67/302 (22%), Positives = 117/302 (38%), Gaps = 7/302 (2%)
Query: 206 NSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS 265
+S S P V+ ++ A P +LC VC D A+ HYGV TC CK FFKR V+
Sbjct: 394 SSPSMRPDVSSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQH 453
Query: 266 KYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXX 325
Y+C C +D CL GM E +T K + +
Sbjct: 454 NYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKK-KIKGIQQATTGVSQETS 512
Query: 326 XXXXXXXLITALVRAHVDTSPDFAN-LDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSID 384
++ A + T ++ P S ++ L +
Sbjct: 513 ENPGNKTIVPATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVI 572
Query: 385 MIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTK--LTFCNGLVL-DK 441
+A+ +PG+ +L +D+ L + + L L +R+ + + L F L++ ++
Sbjct: 573 AAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQ 632
Query: 442 RQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLITD--RHGLKEPHRVEQLQMK 499
R D +L S+ LH + + + C+ L L++ + GLK ++++M
Sbjct: 633 RMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIRMT 692
Query: 500 II 501
I
Sbjct: 693 YI 694
>M24898-1|AAA52335.1| 614|Homo sapiens triiodothyronine receptor
protein.
Length = 614
Score = 79.0 bits (186), Expect = 4e-14
Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 11/171 (6%)
Query: 139 TFDTVTPNQDSYSLPPFPSTVDLHISAEQAARQRRSSLPVQRSESNSSNDSPKLHGTRVH 198
+F ++T +Y PP P+ S Q + S+P S+ S + S +
Sbjct: 40 SFQSLTQGCPTY-FPPSPTG-----SLTQDPARSFGSIPPSLSDDGSPSSSSSSSSSSSS 93
Query: 199 CMQPSTPNSAS----SSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCK 254
S P S S V+P+ +T + LC VCGD A+ HYGV CEGCK
Sbjct: 94 FYNGSPPGSLQVAMEDSSRVSPSKSTSNITKLNGMVLLCKVCGDVASGFHYGVHACEGCK 153
Query: 255 GFFKRTVQKGSKYV-CLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVR 304
GFF+R++Q+ +Y CL ++C + CL+VGM ++ VR
Sbjct: 154 GFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFKKCLSVGMSRDAVR 204
Score = 70.9 bits (166), Expect = 1e-11
Identities = 46/181 (25%), Positives = 88/181 (48%), Gaps = 4/181 (2%)
Query: 370 EVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDT 429
E+ F T ++ + FA+ +PG+ DL D+ L + E+ ++R A ++D
Sbjct: 434 EIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEVLMVRFASLFNVKDQ 493
Query: 430 KLTFCNGLVLDKRQC-QRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGL 487
+ F + ++ GD L A+ DFS L+S+ + A+ L++ DR G+
Sbjct: 494 TVMFLSRTTYSLQELGAMGMGDLLSAMFDFSEKLNSLALTEEELGLFTAVVLVSADRSGM 553
Query: 488 KEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKL 547
+ VEQLQ ++ LRA + F+++L LP+LR+L+ +++ S ++
Sbjct: 554 ENSASVEQLQETLLRALRALV--LKNRPLETSRFTKLLLKLPDLRTLNNMHSEKLLSFRV 611
Query: 548 E 548
+
Sbjct: 612 D 612
>DQ083391-1|AAZ32403.1| 184|Homo sapiens retinoic acid receptor
beta 1' protein.
Length = 184
Score = 79.0 bits (186), Expect = 4e-14
Identities = 46/148 (31%), Positives = 61/148 (41%), Gaps = 9/148 (6%)
Query: 212 PGVAPADNTGPRAAPSSPSQL--------CAVCGDTAACQHYGVRTCEGCKGFFKRTVQK 263
P V + PS PS L C VC D ++ HYGV CEGCKGFF+R++QK
Sbjct: 9 PAVETQSTSSEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQK 68
Query: 264 GSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXX 323
Y C +K+C ++ C VGM KE VR D K ++
Sbjct: 69 NMIYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKETSKQECTES 127
Query: 324 XXXXXXXXXLITALVRAHVDTSPDFANL 351
L + +AH +T P L
Sbjct: 128 YEMTAELDDLTEKIRKAHQETFPSLCQL 155
>BC056148-1|AAH56148.1| 614|Homo sapiens nuclear receptor subfamily
1, group D, member 1 protein.
Length = 614
Score = 79.0 bits (186), Expect = 4e-14
Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 11/171 (6%)
Query: 139 TFDTVTPNQDSYSLPPFPSTVDLHISAEQAARQRRSSLPVQRSESNSSNDSPKLHGTRVH 198
+F ++T +Y PP P+ S Q + S+P S+ S + S +
Sbjct: 40 SFQSLTQGCPTY-FPPSPTG-----SLTQDPARSFGSIPPSLSDDGSPSSSSSSSSSSSS 93
Query: 199 CMQPSTPNSAS----SSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCK 254
S P S S V+P+ +T + LC VCGD A+ HYGV CEGCK
Sbjct: 94 FYNGSPPGSLQVAMEDSSRVSPSKSTSNITKLNGMVLLCKVCGDVASGFHYGVHACEGCK 153
Query: 255 GFFKRTVQKGSKYV-CLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVR 304
GFF+R++Q+ +Y CL ++C + CL+VGM ++ VR
Sbjct: 154 GFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFKKCLSVGMSRDAVR 204
Score = 70.9 bits (166), Expect = 1e-11
Identities = 46/181 (25%), Positives = 88/181 (48%), Gaps = 4/181 (2%)
Query: 370 EVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDT 429
E+ F T ++ + FA+ +PG+ DL D+ L + E+ ++R A ++D
Sbjct: 434 EIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEVLMVRFASLFNVKDQ 493
Query: 430 KLTFCNGLVLDKRQC-QRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGL 487
+ F + ++ GD L A+ DFS L+S+ + A+ L++ DR G+
Sbjct: 494 TVMFLSRTTYSLQELGAMGMGDLLSAMFDFSEKLNSLALTEEELGLFTAVVLVSADRSGM 553
Query: 488 KEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKL 547
+ VEQLQ ++ LRA + F+++L LP+LR+L+ +++ S ++
Sbjct: 554 ENSASVEQLQETLLRALRALV--LKNRPLETSRFTKLLLKLPDLRTLNNMHSEKLLSFRV 611
Query: 548 E 548
+
Sbjct: 612 D 612
>BC047875-1|AAH47875.1| 614|Homo sapiens nuclear receptor subfamily
1, group D, member 1 protein.
Length = 614
Score = 79.0 bits (186), Expect = 4e-14
Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 11/171 (6%)
Query: 139 TFDTVTPNQDSYSLPPFPSTVDLHISAEQAARQRRSSLPVQRSESNSSNDSPKLHGTRVH 198
+F ++T +Y PP P+ S Q + S+P S+ S + S +
Sbjct: 40 SFQSLTQGCPTY-FPPSPTG-----SLTQDPARSFGSIPPSLSDDGSPSSSSSSSSSSSS 93
Query: 199 CMQPSTPNSAS----SSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCK 254
S P S S V+P+ +T + LC VCGD A+ HYGV CEGCK
Sbjct: 94 FYNGSPPGSLQVAMEDSSRVSPSKSTSNITKLNGMVLLCKVCGDVASGFHYGVHACEGCK 153
Query: 255 GFFKRTVQKGSKYV-CLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVR 304
GFF+R++Q+ +Y CL ++C + CL+VGM ++ VR
Sbjct: 154 GFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFKKCLSVGMSRDAVR 204
Score = 70.9 bits (166), Expect = 1e-11
Identities = 46/181 (25%), Positives = 88/181 (48%), Gaps = 4/181 (2%)
Query: 370 EVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDT 429
E+ F T ++ + FA+ +PG+ DL D+ L + E+ ++R A ++D
Sbjct: 434 EIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEVLMVRFASLFNVKDQ 493
Query: 430 KLTFCNGLVLDKRQC-QRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGL 487
+ F + ++ GD L A+ DFS L+S+ + A+ L++ DR G+
Sbjct: 494 TVMFLSRTTYSLQELGAMGMGDLLSAMFDFSEKLNSLALTEEELGLFTAVVLVSADRSGM 553
Query: 488 KEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKL 547
+ VEQLQ ++ LRA + F+++L LP+LR+L+ +++ S ++
Sbjct: 554 ENSASVEQLQETLLRALRALV--LKNRPLETSRFTKLLLKLPDLRTLNNMHSEKLLSFRV 611
Query: 548 E 548
+
Sbjct: 612 D 612
>BC015610-1|AAH15610.1| 777|Homo sapiens nuclear receptor subfamily
3, group C, member 1 (glucocorticoid receptor) protein.
Length = 777
Score = 79.0 bits (186), Expect = 4e-14
Identities = 67/302 (22%), Positives = 117/302 (38%), Gaps = 7/302 (2%)
Query: 206 NSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS 265
+S S P V+ ++ A P +LC VC D A+ HYGV TC CK FFKR V+
Sbjct: 394 SSPSMRPDVSSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQH 453
Query: 266 KYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXX 325
Y+C C +D CL GM E +T K + +
Sbjct: 454 NYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKK-KIKGIQQATTGVSQETS 512
Query: 326 XXXXXXXLITALVRAHVDTSPDFAN-LDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSID 384
++ A + T ++ P S ++ L +
Sbjct: 513 ENPGNKTIVPATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVI 572
Query: 385 MIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTK--LTFCNGLVL-DK 441
+A+ +PG+ +L +D+ L + + L L +R+ + + L F L++ ++
Sbjct: 573 AAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQ 632
Query: 442 RQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLITD--RHGLKEPHRVEQLQMK 499
R D +L S+ LH + + + C+ L L++ + GLK ++++M
Sbjct: 633 RMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIRMT 692
Query: 500 II 501
I
Sbjct: 693 YI 694
>AY436590-1|AAQ97180.1| 777|Homo sapiens nuclear receptor subfamily
3, group C, member 1 (glucocorticoid receptor) protein.
Length = 777
Score = 79.0 bits (186), Expect = 4e-14
Identities = 67/302 (22%), Positives = 117/302 (38%), Gaps = 7/302 (2%)
Query: 206 NSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS 265
+S S P V+ ++ A P +LC VC D A+ HYGV TC CK FFKR V+
Sbjct: 394 SSPSMRPDVSSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQH 453
Query: 266 KYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXX 325
Y+C C +D CL GM E +T K + +
Sbjct: 454 NYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKK-KIKGIQQATTGVSQETS 512
Query: 326 XXXXXXXLITALVRAHVDTSPDFAN-LDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSID 384
++ A + T ++ P S ++ L +
Sbjct: 513 ENPGNKTIVPATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVI 572
Query: 385 MIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTK--LTFCNGLVL-DK 441
+A+ +PG+ +L +D+ L + + L L +R+ + + L F L++ ++
Sbjct: 573 AAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQ 632
Query: 442 RQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLITD--RHGLKEPHRVEQLQMK 499
R D +L S+ LH + + + C+ L L++ + GLK ++++M
Sbjct: 633 RMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIRMT 692
Query: 500 II 501
I
Sbjct: 693 YI 694
>AM183262-1|CAJ65924.1| 751|Homo sapiens glucocorticoid receptor
protein.
Length = 751
Score = 79.0 bits (186), Expect = 4e-14
Identities = 67/302 (22%), Positives = 117/302 (38%), Gaps = 7/302 (2%)
Query: 206 NSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS 265
+S S P V+ ++ A P +LC VC D A+ HYGV TC CK FFKR V+
Sbjct: 368 SSPSMRPDVSSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQH 427
Query: 266 KYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXX 325
Y+C C +D CL GM E +T K + +
Sbjct: 428 NYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKK-KIKGIQQATTGVSQETS 486
Query: 326 XXXXXXXLITALVRAHVDTSPDFAN-LDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSID 384
++ A + T ++ P S ++ L +
Sbjct: 487 ENPGNKTIVPATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVI 546
Query: 385 MIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTK--LTFCNGLVL-DK 441
+A+ +PG+ +L +D+ L + + L L +R+ + + L F L++ ++
Sbjct: 547 AAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQ 606
Query: 442 RQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLITD--RHGLKEPHRVEQLQMK 499
R D +L S+ LH + + + C+ L L++ + GLK ++++M
Sbjct: 607 RMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIRMT 666
Query: 500 II 501
I
Sbjct: 667 YI 668
>AK223594-1|BAD97314.1| 777|Homo sapiens nuclear receptor subfamily
3, group C, member 1 (glucocorticoid receptor) varia
protein.
Length = 777
Score = 79.0 bits (186), Expect = 4e-14
Identities = 67/302 (22%), Positives = 117/302 (38%), Gaps = 7/302 (2%)
Query: 206 NSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS 265
+S S P V+ ++ A P +LC VC D A+ HYGV TC CK FFKR V+
Sbjct: 394 SSPSMRPDVSSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQH 453
Query: 266 KYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXXX 325
Y+C C +D CL GM E +T K + +
Sbjct: 454 NYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKK-KIKGIQQATTGVSQETS 512
Query: 326 XXXXXXXLITALVRAHVDTSPDFAN-LDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSID 384
++ A + T ++ P S ++ L +
Sbjct: 513 ENPGNKTIVPATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVI 572
Query: 385 MIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTK--LTFCNGLVL-DK 441
+A+ +PG+ +L +D+ L + + L L +R+ + + L F L++ ++
Sbjct: 573 AAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQ 632
Query: 442 RQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLITD--RHGLKEPHRVEQLQMK 499
R D +L S+ LH + + + C+ L L++ + GLK ++++M
Sbjct: 633 RMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIRMT 692
Query: 500 II 501
I
Sbjct: 693 YI 694
>BC084544-1|AAH84544.2| 404|Homo sapiens nuclear receptor subfamily
2, group F, member 6 protein.
Length = 404
Score = 78.6 bits (185), Expect = 5e-14
Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 206 NSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS 265
+ ++S PG A G P C VCGD ++ +HYGV TCEGCK FFKR++++
Sbjct: 30 DDSASPPGAASDAEPGDEERPGLQVD-CVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNL 88
Query: 266 KYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVR 304
Y C + + C +D C VGM KE V+
Sbjct: 89 SYTCRSNRDCQIDQHHRNQCQYCRLKKCFRVGMRKEAVQ 127
>BC063018-1|AAH63018.2| 404|Homo sapiens nuclear receptor subfamily
2, group F, member 6 protein.
Length = 404
Score = 78.6 bits (185), Expect = 5e-14
Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 206 NSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS 265
+ ++S PG A G P C VCGD ++ +HYGV TCEGCK FFKR++++
Sbjct: 30 DDSASPPGAASDAEPGDEERPGLQVD-CVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNL 88
Query: 266 KYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVR 304
Y C + + C +D C VGM KE V+
Sbjct: 89 SYTCRSNRDCQIDQHHRNQCQYCRLKKCFRVGMRKEAVQ 127
>BC002669-1|AAH02669.3| 404|Homo sapiens nuclear receptor subfamily
2, group F, member 6 protein.
Length = 404
Score = 78.6 bits (185), Expect = 5e-14
Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 206 NSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS 265
+ ++S PG A G P C VCGD ++ +HYGV TCEGCK FFKR++++
Sbjct: 30 DDSASPPGAASDAEPGDEERPGLQVD-CVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNL 88
Query: 266 KYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVR 304
Y C + + C +D C VGM KE V+
Sbjct: 89 SYTCRSNRDCQIDQHHRNQCQYCRLKKCFRVGMRKEAVQ 127
>AB209091-1|BAD92328.1| 549|Homo sapiens Orphan nuclear receptor
NR1D2 variant protein.
Length = 549
Score = 78.6 bits (185), Expect = 5e-14
Identities = 51/143 (35%), Positives = 73/143 (51%), Gaps = 17/143 (11%)
Query: 174 SSLPVQRSESNS-SNDSPK----------LHGTRVHCMQPSTPNSASSSPGVAPADNTGP 222
SS+P + SNS +N +PK L R+ C S S SS+PG+ + +
Sbjct: 7 SSVPSSPNSSNSDTNGNPKNGDLANIEGILKNDRIDC---SMKTSKSSAPGMTKSHSGVT 63
Query: 223 RAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKY-VCLAEKSCPVDXXX 281
+ S LC VCGD A+ HYGV CEGCKGFF+R++Q+ +Y CL ++C +
Sbjct: 64 KF--SGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMN 121
Query: 282 XXXXXXXXXXXCLAVGMVKEVVR 304
CL+VGM ++ VR
Sbjct: 122 RNRCQQCRFKKCLSVGMSRDAVR 144
Score = 71.3 bits (167), Expect = 8e-12
Identities = 47/188 (25%), Positives = 93/188 (49%), Gaps = 4/188 (2%)
Query: 362 LEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLA 421
++P S E+ +F T ++ + FA+++PG+ DL D+ L + E+ ++R A
Sbjct: 362 VDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRFA 421
Query: 422 YRTRLEDTKLTFCNGLVLDKRQC-QRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTL 480
++ +TF +G GD L+++ +FS L+++ + + A+ L
Sbjct: 422 SLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSDEEMSLFTAVVL 481
Query: 481 IT-DRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGL 539
++ DR G++ + VE LQ +I LR + A F+++L LP+LRSL+
Sbjct: 482 VSADRSGIENVNSVEALQETLIRALRTLI--MKNHPNEASIFTKLLLKLPDLRSLNNMHS 539
Query: 540 QRIFSLKL 547
+ + + K+
Sbjct: 540 EELLAFKV 547
>X72631-1|CAB53540.1| 614|Homo sapiens Rev-ErbAalpha protein
protein.
Length = 614
Score = 78.2 bits (184), Expect = 7e-14
Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 11/171 (6%)
Query: 139 TFDTVTPNQDSYSLPPFPSTVDLHISAEQAARQRRSSLPVQRSESNSSNDSPKLHGTRVH 198
+F ++T +Y PP P+ S Q + S+P S+ S + S +
Sbjct: 40 SFQSLTQGCPTY-FPPSPTG-----SLTQDPARSFGSIPPSLSDDGSPSSSSSSSSSSSS 93
Query: 199 CMQPSTPNSAS----SSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCK 254
S P S S V+P+ +T + LC VCGD A+ HYGV CEGCK
Sbjct: 94 FYNGSPPGSLQVAMEDSSRVSPSKSTSNITKLNGMVLLCKVCGDVASGFHYGVLACEGCK 153
Query: 255 GFFKRTVQKGSKYV-CLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVR 304
GFF+R++Q+ +Y CL ++C + CL+VGM ++ VR
Sbjct: 154 GFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFKKCLSVGMSRDAVR 204
Score = 70.9 bits (166), Expect = 1e-11
Identities = 46/181 (25%), Positives = 88/181 (48%), Gaps = 4/181 (2%)
Query: 370 EVIHQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDT 429
E+ F T ++ + FA+ +PG+ DL D+ L + E+ ++R A ++D
Sbjct: 434 EIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEVLMVRFASLFNVKDQ 493
Query: 430 KLTFCNGLVLDKRQC-QRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGL 487
+ F + ++ GD L A+ DFS L+S+ + A+ L++ DR G+
Sbjct: 494 TVMFLSRTTYSLQELGAMGMGDLLSAMFDFSEKLNSLALTEEELGLFTAVVLVSADRSGM 553
Query: 488 KEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKL 547
+ VEQLQ ++ LRA + F+++L LP+LR+L+ +++ S ++
Sbjct: 554 ENSASVEQLQETLLRALRALV--LKNRPLETSRFTKLLLKLPDLRTLNNMHSEKLLSFRV 611
Query: 548 E 548
+
Sbjct: 612 D 612
>X03635-2|CAA27284.1| 595|Homo sapiens oestrogen receptor protein.
Length = 595
Score = 78.2 bits (184), Expect = 7e-14
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 205 PNSASSSPG----VAPADNTGPRAAPSSP-SQLCAVCGDTAACQHYGVRTCEGCKGFFKR 259
PNS + G +A ++ G A S+ ++ CAVC D A+ HYGV +CEGCK FFKR
Sbjct: 152 PNSDNRRQGGRERLASTNDKGSMAMESAKETRYCAVCNDYASGYHYGVWSCEGCKAFFKR 211
Query: 260 TVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGR 311
++Q + Y+C A C +D C VGM+K +R D GR
Sbjct: 212 SIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGR 263
Score = 64.1 bits (149), Expect = 1e-09
Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 21/240 (8%)
Query: 337 LVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGY 396
+V A +D P YS+Y +P+ P S+ ++ +L + + +A++VPG+
Sbjct: 315 MVSALLDAEPPIL---YSEY-DPTR---PFSEASMMGLLTNLADRELVHMINWAKRVPGF 367
Query: 397 GDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQ--CQRSFGDWLHA 454
DL D+ L A LE+ ++ L +R+ KL F L+LD+ Q C +
Sbjct: 368 VDLTLHDQVHLLECAWLEILMIGLVWRSMEHPVKLLFAPNLLLDRNQGKCVEGMVEIFDM 427
Query: 455 VLDFSNTLHSMDIDISTFACLCALTLI---------TDRHGLKEPHRVEQLQMKIIGCLR 505
+L S+ M++ F CL ++ L+ + L+E + ++ KI L
Sbjct: 428 LLATSSRFRMMNLQGEEFVCLKSIILLNSGVYTFLSSTLKSLEEKDHIHRVLDKITDTL- 486
Query: 506 AHMPXXXXXXXXAPH--FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRA 563
H+ H +++L L +R +S +G++ ++S+K +++VP L+ M A
Sbjct: 487 IHLMAKAGLTLQQQHQRLAQLLLILSHIRHMSNKGMEHLYSMKCKNVVPLYDLLLEMLDA 546
>U47678-1|AAB00115.1| 701|Homo sapiens 80 kDa estrogen receptor
protein.
Length = 701
Score = 78.2 bits (184), Expect = 7e-14
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 205 PNSASSSPG----VAPADNTGPRAAPSSP-SQLCAVCGDTAACQHYGVRTCEGCKGFFKR 259
PNS + G +A ++ G A S+ ++ CAVC D A+ HYGV +CEGCK FFKR
Sbjct: 152 PNSDNRRQGGRERLASTNDKGSMAMESAKETRYCAVCNDYASGYHYGVWSCEGCKAFFKR 211
Query: 260 TVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGR 311
++Q + Y+C A C +D C VGM+K +R D GR
Sbjct: 212 SIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGR 263
Score = 51.6 bits (118), Expect = 7e-06
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 9/147 (6%)
Query: 337 LVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGY 396
+V A +D P YS+Y +P+ P S+ ++ +L + + +A++VPG+
Sbjct: 315 MVSALLDAEPPIL---YSEY-DPTR---PFSEASMMGLLTNLADRELVHMINWAKRVPGF 367
Query: 397 GDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQ--CQRSFGDWLHA 454
DL D+ L A LE+ ++ L +R+ KL F L+LD+ Q C +
Sbjct: 368 VDLTLHDQVHLLECAWLEILMIGLVWRSMEHPVKLLFAPNLLLDRNQGKCVEGMVEIFDM 427
Query: 455 VLDFSNTLHSMDIDISTFACLCALTLI 481
+L S+ M++ F CL ++ L+
Sbjct: 428 LLATSSRFRMMNLQGEEFVCLKSIILL 454
>M12674-1|AAA52399.1| 595|Homo sapiens ESR protein.
Length = 595
Score = 78.2 bits (184), Expect = 7e-14
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 205 PNSASSSPG----VAPADNTGPRAAPSSP-SQLCAVCGDTAACQHYGVRTCEGCKGFFKR 259
PNS + G +A ++ G A S+ ++ CAVC D A+ HYGV +CEGCK FFKR
Sbjct: 152 PNSDNRRQGGRERLASTNDKGSMAMESAKETRYCAVCNDYASGYHYGVWSCEGCKAFFKR 211
Query: 260 TVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGR 311
++Q + Y+C A C +D C VGM+K +R D GR
Sbjct: 212 SIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGR 263
Score = 64.1 bits (149), Expect = 1e-09
Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 21/240 (8%)
Query: 337 LVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGY 396
+V A +D P YS+Y +P+ P S+ ++ +L + + +A++VPG+
Sbjct: 315 MVSALLDAEPPIL---YSEY-DPTR---PFSEASMMGLLTNLADRELVHMINWAKRVPGF 367
Query: 397 GDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQ--CQRSFGDWLHA 454
DL D+ L A LE+ ++ L +R+ KL F L+LD+ Q C +
Sbjct: 368 VDLTLHDQVHLLECAWLEILMIGLVWRSMEHPVKLLFAPNLLLDRNQGKCVEGMVEIFDM 427
Query: 455 VLDFSNTLHSMDIDISTFACLCALTLI---------TDRHGLKEPHRVEQLQMKIIGCLR 505
+L S+ M++ F CL ++ L+ + L+E + ++ KI L
Sbjct: 428 LLATSSRFRMMNLQGEEFVCLKSIILLNSGVYTFLSSTLKSLEEKDHIHRVLDKITDTL- 486
Query: 506 AHMPXXXXXXXXAPH--FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRA 563
H+ H +++L L +R +S +G++ ++S+K +++VP L+ M A
Sbjct: 487 IHLMAKAGLTLQQQHQRLAQLLLILSHIRHMSNKGMEHLYSMKCKNVVPLYDLLLEMLDA 546
>BC128574-1|AAI28575.1| 595|Homo sapiens estrogen receptor 1
protein.
Length = 595
Score = 78.2 bits (184), Expect = 7e-14
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 205 PNSASSSPG----VAPADNTGPRAAPSSP-SQLCAVCGDTAACQHYGVRTCEGCKGFFKR 259
PNS + G +A ++ G A S+ ++ CAVC D A+ HYGV +CEGCK FFKR
Sbjct: 152 PNSDNRRQGGRERLASTNDKGSMAMESAKETRYCAVCNDYASGYHYGVWSCEGCKAFFKR 211
Query: 260 TVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGR 311
++Q + Y+C A C +D C VGM+K +R D GR
Sbjct: 212 SIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGR 263
Score = 63.3 bits (147), Expect = 2e-09
Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 21/240 (8%)
Query: 337 LVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGY 396
+V A +D P YS+Y +P+ P S+ ++ +L + + +A++VPG+
Sbjct: 315 MVSALLDAEPPIL---YSEY-DPTR---PFSEASMMGLLTNLADRELVHMINWAKRVPGF 367
Query: 397 GDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQ--CQRSFGDWLHA 454
DL D+ L A LE+ ++ L +R+ KL F L+LD+ Q C +
Sbjct: 368 VDLTLHDQVHLLECAWLEILMIGLVWRSMEHPGKLLFAPNLLLDRNQGKCVEGMVEIFDM 427
Query: 455 VLDFSNTLHSMDIDISTFACLCALTLI---------TDRHGLKEPHRVEQLQMKIIGCLR 505
+L S+ M++ F CL ++ L+ + L+E + ++ KI L
Sbjct: 428 LLATSSRFRMMNLQGEEFVCLKSIILLNSGVYTFLSSTLKSLEEKDHIHRVLDKITDTL- 486
Query: 506 AHMPXXXXXXXXAPH--FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRA 563
H+ H +++L L +R +S +G++ ++S+K +++VP L+ M A
Sbjct: 487 IHLMAKAGLTLQQQHQRLAQLLLILSHIRHMSNKGMEHLYSMKCKNVVPLYDLLLEMLDA 546
>BC128573-1|AAI28574.1| 595|Homo sapiens estrogen receptor 1
protein.
Length = 595
Score = 78.2 bits (184), Expect = 7e-14
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 205 PNSASSSPG----VAPADNTGPRAAPSSP-SQLCAVCGDTAACQHYGVRTCEGCKGFFKR 259
PNS + G +A ++ G A S+ ++ CAVC D A+ HYGV +CEGCK FFKR
Sbjct: 152 PNSDNRRQGGRERLASTNDKGSMAMESAKETRYCAVCNDYASGYHYGVWSCEGCKAFFKR 211
Query: 260 TVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGR 311
++Q + Y+C A C +D C VGM+K +R D GR
Sbjct: 212 SIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGR 263
Score = 63.3 bits (147), Expect = 2e-09
Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 21/240 (8%)
Query: 337 LVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGY 396
+V A +D P YS+Y +P+ P S+ ++ +L + + +A++VPG+
Sbjct: 315 MVSALLDAEPPIL---YSEY-DPTR---PFSEASMMGLLTNLADRELVHMINWAKRVPGF 367
Query: 397 GDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQ--CQRSFGDWLHA 454
DL D+ L A LE+ ++ L +R+ KL F L+LD+ Q C +
Sbjct: 368 VDLTLHDQVHLLECAWLEILMIGLVWRSMEHPGKLLFAPNLLLDRNQGKCVEGMVEIFDM 427
Query: 455 VLDFSNTLHSMDIDISTFACLCALTLI---------TDRHGLKEPHRVEQLQMKIIGCLR 505
+L S+ M++ F CL ++ L+ + L+E + ++ KI L
Sbjct: 428 LLATSSRFRMMNLQGEEFVCLKSIILLNSGVYTFLSSTLKSLEEKDHIHRVLDKITDTL- 486
Query: 506 AHMPXXXXXXXXAPH--FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRA 563
H+ H +++L L +R +S +G++ ++S+K +++VP L+ M A
Sbjct: 487 IHLMAKAGLTLQQQHQRLAQLLLILSHIRHMSNKGMEHLYSMKCKNVVPLYDLLLEMLDA 546
>AY425004-1|AAQ91815.1| 595|Homo sapiens estrogen receptor 1
protein.
Length = 595
Score = 78.2 bits (184), Expect = 7e-14
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 205 PNSASSSPG----VAPADNTGPRAAPSSP-SQLCAVCGDTAACQHYGVRTCEGCKGFFKR 259
PNS + G +A ++ G A S+ ++ CAVC D A+ HYGV +CEGCK FFKR
Sbjct: 152 PNSDNRRQGGRERLASTNDKGSMAMESAKETRYCAVCNDYASGYHYGVWSCEGCKAFFKR 211
Query: 260 TVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGR 311
++Q + Y+C A C +D C VGM+K +R D GR
Sbjct: 212 SIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGR 263
Score = 63.3 bits (147), Expect = 2e-09
Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 21/240 (8%)
Query: 337 LVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGY 396
+V A +D P YS+Y +P+ P S+ ++ +L + + +A++VPG+
Sbjct: 315 MVSALLDAEPPIL---YSEY-DPTR---PFSEASMMGLLTNLADRELVHMINWAKRVPGF 367
Query: 397 GDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQ--CQRSFGDWLHA 454
DL D+ L A LE+ ++ L +R+ KL F L+LD+ Q C +
Sbjct: 368 VDLTLHDQVHLLECAWLEILMIGLVWRSMEHPGKLLFAPNLLLDRNQGKCVEGMVEIFDM 427
Query: 455 VLDFSNTLHSMDIDISTFACLCALTLI---------TDRHGLKEPHRVEQLQMKIIGCLR 505
+L S+ M++ F CL ++ L+ + L+E + ++ KI L
Sbjct: 428 LLATSSRFRMMNLQGEEFVCLKSIILLNSGVYTFLSSTLKSLEEKDHIHRVLDKITDTL- 486
Query: 506 AHMPXXXXXXXXAPH--FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRA 563
H+ H +++L L +R +S +G++ ++S+K +++VP L+ M A
Sbjct: 487 IHLMAKAGLTLQQQHQRLAQLLLILSHIRHMSNKGMEHLYSMKCKNVVPLYDLLLEMLDA 546
>AL590993-1|CAI14237.1| 595|Homo sapiens estrogen receptor 1
protein.
Length = 595
Score = 78.2 bits (184), Expect = 7e-14
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 205 PNSASSSPG----VAPADNTGPRAAPSSP-SQLCAVCGDTAACQHYGVRTCEGCKGFFKR 259
PNS + G +A ++ G A S+ ++ CAVC D A+ HYGV +CEGCK FFKR
Sbjct: 152 PNSDNRRQGGRERLASTNDKGSMAMESAKETRYCAVCNDYASGYHYGVWSCEGCKAFFKR 211
Query: 260 TVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGR 311
++Q + Y+C A C +D C VGM+K +R D GR
Sbjct: 212 SIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGR 263
Score = 63.3 bits (147), Expect = 2e-09
Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 21/240 (8%)
Query: 337 LVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGY 396
+V A +D P YS+Y +P+ P S+ ++ +L + + +A++VPG+
Sbjct: 315 MVSALLDAEPPIL---YSEY-DPTR---PFSEASMMGLLTNLADRELVHMINWAKRVPGF 367
Query: 397 GDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQ--CQRSFGDWLHA 454
DL D+ L A LE+ ++ L +R+ KL F L+LD+ Q C +
Sbjct: 368 VDLTLHDQVHLLECAWLEILMIGLVWRSMEHPGKLLFAPNLLLDRNQGKCVEGMVEIFDM 427
Query: 455 VLDFSNTLHSMDIDISTFACLCALTLI---------TDRHGLKEPHRVEQLQMKIIGCLR 505
+L S+ M++ F CL ++ L+ + L+E + ++ KI L
Sbjct: 428 LLATSSRFRMMNLQGEEFVCLKSIILLNSGVYTFLSSTLKSLEEKDHIHRVLDKITDTL- 486
Query: 506 AHMPXXXXXXXXAPH--FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRA 563
H+ H +++L L +R +S +G++ ++S+K +++VP L+ M A
Sbjct: 487 IHLMAKAGLTLQQQHQRLAQLLLILSHIRHMSNKGMEHLYSMKCKNVVPLYDLLLEMLDA 546
>AL356311-2|CAI21012.1| 595|Homo sapiens estrogen receptor 1
protein.
Length = 595
Score = 78.2 bits (184), Expect = 7e-14
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 205 PNSASSSPG----VAPADNTGPRAAPSSP-SQLCAVCGDTAACQHYGVRTCEGCKGFFKR 259
PNS + G +A ++ G A S+ ++ CAVC D A+ HYGV +CEGCK FFKR
Sbjct: 152 PNSDNRRQGGRERLASTNDKGSMAMESAKETRYCAVCNDYASGYHYGVWSCEGCKAFFKR 211
Query: 260 TVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGR 311
++Q + Y+C A C +D C VGM+K +R D GR
Sbjct: 212 SIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGR 263
Score = 63.3 bits (147), Expect = 2e-09
Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 21/240 (8%)
Query: 337 LVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGY 396
+V A +D P YS+Y +P+ P S+ ++ +L + + +A++VPG+
Sbjct: 315 MVSALLDAEPPIL---YSEY-DPTR---PFSEASMMGLLTNLADRELVHMINWAKRVPGF 367
Query: 397 GDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQ--CQRSFGDWLHA 454
DL D+ L A LE+ ++ L +R+ KL F L+LD+ Q C +
Sbjct: 368 VDLTLHDQVHLLECAWLEILMIGLVWRSMEHPGKLLFAPNLLLDRNQGKCVEGMVEIFDM 427
Query: 455 VLDFSNTLHSMDIDISTFACLCALTLI---------TDRHGLKEPHRVEQLQMKIIGCLR 505
+L S+ M++ F CL ++ L+ + L+E + ++ KI L
Sbjct: 428 LLATSSRFRMMNLQGEEFVCLKSIILLNSGVYTFLSSTLKSLEEKDHIHRVLDKITDTL- 486
Query: 506 AHMPXXXXXXXXAPH--FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRA 563
H+ H +++L L +R +S +G++ ++S+K +++VP L+ M A
Sbjct: 487 IHLMAKAGLTLQQQHQRLAQLLLILSHIRHMSNKGMEHLYSMKCKNVVPLYDLLLEMLDA 546
>AL078582-4|CAI42285.1| 595|Homo sapiens estrogen receptor 1
protein.
Length = 595
Score = 78.2 bits (184), Expect = 7e-14
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 205 PNSASSSPG----VAPADNTGPRAAPSSP-SQLCAVCGDTAACQHYGVRTCEGCKGFFKR 259
PNS + G +A ++ G A S+ ++ CAVC D A+ HYGV +CEGCK FFKR
Sbjct: 152 PNSDNRRQGGRERLASTNDKGSMAMESAKETRYCAVCNDYASGYHYGVWSCEGCKAFFKR 211
Query: 260 TVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGR 311
++Q + Y+C A C +D C VGM+K +R D GR
Sbjct: 212 SIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGR 263
Score = 63.3 bits (147), Expect = 2e-09
Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 21/240 (8%)
Query: 337 LVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGY 396
+V A +D P YS+Y +P+ P S+ ++ +L + + +A++VPG+
Sbjct: 315 MVSALLDAEPPIL---YSEY-DPTR---PFSEASMMGLLTNLADRELVHMINWAKRVPGF 367
Query: 397 GDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQ--CQRSFGDWLHA 454
DL D+ L A LE+ ++ L +R+ KL F L+LD+ Q C +
Sbjct: 368 VDLTLHDQVHLLECAWLEILMIGLVWRSMEHPGKLLFAPNLLLDRNQGKCVEGMVEIFDM 427
Query: 455 VLDFSNTLHSMDIDISTFACLCALTLI---------TDRHGLKEPHRVEQLQMKIIGCLR 505
+L S+ M++ F CL ++ L+ + L+E + ++ KI L
Sbjct: 428 LLATSSRFRMMNLQGEEFVCLKSIILLNSGVYTFLSSTLKSLEEKDHIHRVLDKITDTL- 486
Query: 506 AHMPXXXXXXXXAPH--FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRA 563
H+ H +++L L +R +S +G++ ++S+K +++VP L+ M A
Sbjct: 487 IHLMAKAGLTLQQQHQRLAQLLLILSHIRHMSNKGMEHLYSMKCKNVVPLYDLLLEMLDA 546
>AL049821-1|CAI22123.1| 595|Homo sapiens estrogen receptor 1
protein.
Length = 595
Score = 78.2 bits (184), Expect = 7e-14
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 205 PNSASSSPG----VAPADNTGPRAAPSSP-SQLCAVCGDTAACQHYGVRTCEGCKGFFKR 259
PNS + G +A ++ G A S+ ++ CAVC D A+ HYGV +CEGCK FFKR
Sbjct: 152 PNSDNRRQGGRERLASTNDKGSMAMESAKETRYCAVCNDYASGYHYGVWSCEGCKAFFKR 211
Query: 260 TVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGR 311
++Q + Y+C A C +D C VGM+K +R D GR
Sbjct: 212 SIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGR 263
Score = 63.3 bits (147), Expect = 2e-09
Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 21/240 (8%)
Query: 337 LVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGY 396
+V A +D P YS+Y +P+ P S+ ++ +L + + +A++VPG+
Sbjct: 315 MVSALLDAEPPIL---YSEY-DPTR---PFSEASMMGLLTNLADRELVHMINWAKRVPGF 367
Query: 397 GDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQ--CQRSFGDWLHA 454
DL D+ L A LE+ ++ L +R+ KL F L+LD+ Q C +
Sbjct: 368 VDLTLHDQVHLLECAWLEILMIGLVWRSMEHPGKLLFAPNLLLDRNQGKCVEGMVEIFDM 427
Query: 455 VLDFSNTLHSMDIDISTFACLCALTLI---------TDRHGLKEPHRVEQLQMKIIGCLR 505
+L S+ M++ F CL ++ L+ + L+E + ++ KI L
Sbjct: 428 LLATSSRFRMMNLQGEEFVCLKSIILLNSGVYTFLSSTLKSLEEKDHIHRVLDKITDTL- 486
Query: 506 AHMPXXXXXXXXAPH--FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRA 563
H+ H +++L L +R +S +G++ ++S+K +++VP L+ M A
Sbjct: 487 IHLMAKAGLTLQQQHQRLAQLLLILSHIRHMSNKGMEHLYSMKCKNVVPLYDLLLEMLDA 546
>AF123500-1|AAD52984.1| 444|Homo sapiens estrogen receptor alpha
protein.
Length = 444
Score = 78.2 bits (184), Expect = 7e-14
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 205 PNSASSSPG----VAPADNTGPRAAPSSP-SQLCAVCGDTAACQHYGVRTCEGCKGFFKR 259
PNS + G +A ++ G A S+ ++ CAVC D A+ HYGV +CEGCK FFKR
Sbjct: 1 PNSDNRRQGGRERLASTNDKGSMAMESAKETRYCAVCNDYASGYHYGVWSCEGCKAFFKR 60
Query: 260 TVQKGSKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGR 311
++Q + Y+C A C +D C VGM+K +R D GR
Sbjct: 61 SIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGR 112
Score = 63.3 bits (147), Expect = 2e-09
Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 21/240 (8%)
Query: 337 LVRAHVDTSPDFANLDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSIDMIKLFAEKVPGY 396
+V A +D P YS+Y +P+ P S+ ++ +L + + +A++VPG+
Sbjct: 164 MVSALLDAEPPIL---YSEY-DPTR---PFSEASMMGLLTNLADRELVHMINWAKRVPGF 216
Query: 397 GDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFCNGLVLDKRQ--CQRSFGDWLHA 454
DL D+ L A LE+ ++ L +R+ KL F L+LD+ Q C +
Sbjct: 217 VDLTLHDQVHLLECAWLEILMIGLVWRSMEHPGKLLFAPNLLLDRNQGKCVEGMVEIFDM 276
Query: 455 VLDFSNTLHSMDIDISTFACLCALTLI---------TDRHGLKEPHRVEQLQMKIIGCLR 505
+L S+ M++ F CL ++ L+ + L+E + ++ KI L
Sbjct: 277 LLATSSRFRMMNLQGEEFVCLKSIILLNSGVYTFLSSTLKSLEEKDHIHRVLDKITDTL- 335
Query: 506 AHMPXXXXXXXXAPH--FSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMFRA 563
H+ H +++L L +R +S +G++ ++S+K +++VP L+ M A
Sbjct: 336 IHLMAKAGLTLQQQHQRLAQLLLILSHIRHMSNKGMEHLYSMKCKNVVPLYDLLLEMLDA 395
>M29960-1|AAA36761.1| 603|Homo sapiens protein ( Human steroid
receptor (TR2-11) mRNA, complete cds. ).
Length = 603
Score = 77.4 bits (182), Expect = 1e-13
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 218 DNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPV 277
DN+ P P+ LC VCGD A+ +HYG TCEGCKGFFKR+++K Y C K C +
Sbjct: 99 DNS-PDQGPNKVFDLCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCII 157
Query: 278 DXXXXXXXXXXXXXXCLAVGMVKEVVRTD 306
+ C+A GM ++ V+ +
Sbjct: 158 NKHHRNRCQYCRLQRCIAFGMKQDSVQCE 186
>M29959-1|AAA36762.1| 467|Homo sapiens protein ( Human steroid
receptor (TR2-9) mRNA, complete cds. ).
Length = 467
Score = 77.4 bits (182), Expect = 1e-13
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 218 DNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPV 277
DN+ P P+ LC VCGD A+ +HYG TCEGCKGFFKR+++K Y C K C +
Sbjct: 99 DNS-PDQGPNKVFDLCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCII 157
Query: 278 DXXXXXXXXXXXXXXCLAVGMVKEVVRTD 306
+ C+A GM ++ V+ +
Sbjct: 158 NKHHRNRCQYCRLQRCIAFGMKQDSVQCE 186
>M21985-1|AAA36650.1| 483|Homo sapiens protein ( Human steroid
receptor TR2 mRNA, complete cds. ).
Length = 483
Score = 77.4 bits (182), Expect = 1e-13
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 218 DNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPV 277
DN+ P P+ LC VCGD A+ +HYG TCEGCKGFFKR+++K Y C K C +
Sbjct: 99 DNS-PDQGPNKVFDLCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCII 157
Query: 278 DXXXXXXXXXXXXXXCLAVGMVKEVVRTD 306
+ C+A GM ++ V+ +
Sbjct: 158 NKHHRNRCQYCRLQRCIAFGMKQDSVQCE 186
>BC040141-1|AAH40141.1| 467|Homo sapiens nuclear receptor subfamily
2, group C, member 1 protein.
Length = 467
Score = 77.4 bits (182), Expect = 1e-13
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 218 DNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPV 277
DN+ P P+ LC VCGD A+ +HYG TCEGCKGFFKR+++K Y C K C +
Sbjct: 99 DNS-PDQGPNKVFDLCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCII 157
Query: 278 DXXXXXXXXXXXXXXCLAVGMVKEVVRTD 306
+ C+A GM ++ V+ +
Sbjct: 158 NKHHRNRCQYCRLQRCIAFGMKQDSVQCE 186
>U22662-1|AAA85856.1| 447|Homo sapiens nuclear orphan receptor
LXR-alpha protein.
Length = 447
Score = 76.6 bits (180), Expect = 2e-13
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
Query: 152 LPPFPSTVDL-HISAEQAARQRRS-SLPVQRSESNSSNDSPKLHGTRVHCMQPSTPNSAS 209
+PP S V+L A+ A+ Q + S + R E+ + + G + +P+ + +
Sbjct: 12 IPP-DSAVELWKPGAQDASSQAQGGSSCILREEARMPHSAGGTAGVGLEAAEPTALLTRA 70
Query: 210 SSPG----VAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS 265
P + P A ++LC+VCGD A+ HY V +CEGCKGFF+R+V KG+
Sbjct: 71 EPPSEPTEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGA 130
Query: 266 KYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTD 306
Y+C + CP+D C GM +E V ++
Sbjct: 131 HYICHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSE 171
Score = 68.5 bits (160), Expect = 6e-11
Identities = 51/210 (24%), Positives = 104/210 (49%), Gaps = 10/210 (4%)
Query: 359 PSPLEPPMSDLEVIHQ----FYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLE 414
P P+ P E Q F L S+ I FA+++PG+ L ED+ L ++ +E
Sbjct: 237 PWPMAPDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIE 296
Query: 415 LFVLRLAYRTRLEDTKLTFCNGLVLDKRQCQRS--FGDWLHAVLDFSNTLHSMDIDISTF 472
+ +L + R +TF ++ ++ ++++ + +FS ++ + ++ + F
Sbjct: 297 VMLLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEF 356
Query: 473 ACLCALTLIT-DRHGLKEPHRVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPEL 531
A L A+++ + DR +++ +VE+LQ + L A++ F R+L L L
Sbjct: 357 ALLIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLM--FPRMLMKLVSL 414
Query: 532 RSLSVQGLQRIFSLKLEDLVPAPPLIENMF 561
R+LS +++F+L+L+D PPL+ ++
Sbjct: 415 RTLSSVHSEQVFALRLQD-KKLPPLLSEIW 443
>BC008819-1|AAH08819.1| 387|Homo sapiens NR1H3 protein protein.
Length = 387
Score = 76.6 bits (180), Expect = 2e-13
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
Query: 152 LPPFPSTVDL-HISAEQAARQRRS-SLPVQRSESNSSNDSPKLHGTRVHCMQPSTPNSAS 209
+PP S V+L A+ A+ Q + S + R E+ + + G + +P+ + +
Sbjct: 12 IPP-DSAVELWKPGAQDASSQAQGGSSCILREEARMPHSAGGTAGVGLEAAEPTALLTRA 70
Query: 210 SSPG----VAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS 265
P + P A ++LC+VCGD A+ HY V +CEGCKGFF+R+V KG+
Sbjct: 71 EPPSEPTEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGA 130
Query: 266 KYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTD 306
Y+C + CP+D C GM +E V ++
Sbjct: 131 HYICHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSE 171
Score = 48.4 bits (110), Expect = 7e-05
Identities = 29/113 (25%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 450 DWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPHRVEQLQMKIIGCLRAHM 508
++++ + +FS ++ + ++ + FA L A+++ + DR +++ +VE+LQ + L A++
Sbjct: 274 EFINPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQVERLQHTYVEALHAYV 333
Query: 509 PXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLVPAPPLIENMF 561
F R+L L LR+LS +++F+L+L+D PPL+ ++
Sbjct: 334 SIHHPHDRLM--FPRMLMKLVSLRTLSSVHSEQVFALRLQD-KKLPPLLSEIW 383
>U01351-2|AAA16603.1| 778|Homo sapiens glucocorticoid receptor
alpha-2 protein.
Length = 778
Score = 76.2 bits (179), Expect = 3e-13
Identities = 67/303 (22%), Positives = 118/303 (38%), Gaps = 8/303 (2%)
Query: 206 NSASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQ-KG 264
+S S P V+ ++ A P +LC VC D A+ HYGV TC CK FFKR V+ +
Sbjct: 394 SSPSMRPDVSSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGRQ 453
Query: 265 SKYVCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVRTDSLKGRRGRLXXXXXXXXX 324
Y+C C +D CL GM E +T K + +
Sbjct: 454 HNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKK-KIKGIQQATTGVSQET 512
Query: 325 XXXXXXXXLITALVRAHVDTSPDFAN-LDYSQYREPSPLEPPMSDLEVIHQFYSLLTTSI 383
++ A + T ++ P S ++ L +
Sbjct: 513 SENPGNKTIVPATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQV 572
Query: 384 DMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTK--LTFCNGLVL-D 440
+A+ +PG+ +L +D+ L + + L L +R+ + + L F L++ +
Sbjct: 573 IAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINE 632
Query: 441 KRQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLITD--RHGLKEPHRVEQLQM 498
+R D +L S+ LH + + + C+ L L++ + GLK ++++M
Sbjct: 633 QRMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIRM 692
Query: 499 KII 501
I
Sbjct: 693 TYI 695
>U14534-1|AAA58594.1| 455|Homo sapiens orphan receptor protein.
Length = 455
Score = 75.4 bits (177), Expect = 5e-13
Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 6/190 (3%)
Query: 375 FYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFC 434
F L S+ I FA++VPG+ L ED+ L ++ +E+ +L A R E +TF
Sbjct: 265 FTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFL 324
Query: 435 NGLVLDKRQCQRS--FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPH 491
K R+ ++++ + +FS + + +D + +A L A+ + + DR ++EP
Sbjct: 325 KDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPG 384
Query: 492 RVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLV 551
RVE LQ + L ++ F R+L L LR+LS +++F+L+L+D
Sbjct: 385 RVEALQQPYVEALLSY--TRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQD-K 441
Query: 552 PAPPLIENMF 561
PPL+ ++
Sbjct: 442 KLPPLLSEIW 451
Score = 62.9 bits (146), Expect = 3e-09
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS--KYVCLAEKSCPVDXXXXXXXXXX 288
+LC VCGD A+ HY V +CEGCKGFF+R+V +G +Y C +C +D
Sbjct: 79 ELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARRYACRGGGTCQMDAFMRRKCQQC 138
Query: 289 XXXXCLAVGMVKEVVRTD 306
C GM ++ V ++
Sbjct: 139 RLRKCKEAGMREQCVLSE 156
>U07132-1|AAA61783.1| 461|Homo sapiens Ner-I protein.
Length = 461
Score = 75.4 bits (177), Expect = 5e-13
Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 6/190 (3%)
Query: 375 FYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFC 434
F L S+ I FA++VPG+ L ED+ L ++ +E+ +L A R E +TF
Sbjct: 271 FTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFL 330
Query: 435 NGLVLDKRQCQRS--FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPH 491
K R+ ++++ + +FS + + +D + +A L A+ + + DR ++EP
Sbjct: 331 KDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPG 390
Query: 492 RVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLV 551
RVE LQ + L ++ F R+L L LR+LS +++F+L+L+D
Sbjct: 391 RVEALQQPYVEALLSY--TRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQD-K 447
Query: 552 PAPPLIENMF 561
PPL+ ++
Sbjct: 448 KLPPLLSEIW 457
Score = 62.9 bits (146), Expect = 3e-09
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS--KYVCLAEKSCPVDXXXXXXXXXX 288
+LC VCGD A+ HY V +CEGCKGFF+R+V +G +Y C +C +D
Sbjct: 85 ELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARRYACRGGGTCQMDAFMRRKCQQC 144
Query: 289 XXXXCLAVGMVKEVVRTD 306
C GM ++ V ++
Sbjct: 145 RLRKCKEAGMREQCVLSE 162
>U04897-1|AAA62658.1| 523|Homo sapiens RORalpha1 protein.
Length = 523
Score = 75.4 bits (177), Expect = 5e-13
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 208 ASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKY 267
+S+S G++ T P C +CGD ++ HYGV TCEGCKGFF+R+ Q + Y
Sbjct: 51 SSTSRGISVTKKTHTSQIEIIP---CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATY 107
Query: 268 VCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVR 304
C +K+C +D CLAVGM ++ V+
Sbjct: 108 SCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVK 144
Score = 48.4 bits (110), Expect = 7e-05
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 370 EVIHQFYSL-LTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLED 428
EV+ Q ++ +T +I + FA+++ G+ +LC D+ L + LE+ +R+ ++
Sbjct: 317 EVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQN 376
Query: 429 TKLTFCNGLVLDKRQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGL 487
+ F D++ V +F +L SM + A A L++ DR L
Sbjct: 377 NTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWL 436
Query: 488 KEPHRVEQLQMKI 500
+E ++E+LQ KI
Sbjct: 437 QEKVKIEKLQQKI 449
>CR456706-1|CAG32987.1| 461|Homo sapiens NR1H2 protein.
Length = 461
Score = 75.4 bits (177), Expect = 5e-13
Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 6/190 (3%)
Query: 375 FYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFC 434
F L S+ I FA++VPG+ L ED+ L ++ +E+ +L A R E +TF
Sbjct: 271 FTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFL 330
Query: 435 NGLVLDKRQCQRS--FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPH 491
K R+ ++++ + +FS + + +D + +A L A+ + + DR ++EP
Sbjct: 331 KDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPG 390
Query: 492 RVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLV 551
RVE LQ + L ++ F R+L L LR+LS +++F+L+L+D
Sbjct: 391 RVEALQQPYVEALLSY--TRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQD-K 447
Query: 552 PAPPLIENMF 561
PPL+ ++
Sbjct: 448 KLPPLLSEIW 457
Score = 62.9 bits (146), Expect = 3e-09
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS--KYVCLAEKSCPVDXXXXXXXXXX 288
+LC VCGD A+ HY V +CEGCKGFF+R+V +G +Y C +C +D
Sbjct: 85 ELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARRYACRGGGTCQMDAFMRRKCQQC 144
Query: 289 XXXXCLAVGMVKEVVRTD 306
C GM ++ V ++
Sbjct: 145 RLRKCKEAGMREQCVLSE 162
>BC074500-1|AAH74500.1| 461|Homo sapiens nuclear receptor subfamily
1, group H, member 2 protein.
Length = 461
Score = 75.4 bits (177), Expect = 5e-13
Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 6/190 (3%)
Query: 375 FYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFC 434
F L S+ I FA++VPG+ L ED+ L ++ +E+ +L A R E +TF
Sbjct: 271 FTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFL 330
Query: 435 NGLVLDKRQCQRS--FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPH 491
K R+ ++++ + +FS + + +D + +A L A+ + + DR ++EP
Sbjct: 331 KDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPG 390
Query: 492 RVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLV 551
RVE LQ + L ++ F R+L L LR+LS +++F+L+L+D
Sbjct: 391 RVEALQQPYVEALLSY--TRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQD-K 447
Query: 552 PAPPLIENMF 561
PPL+ ++
Sbjct: 448 KLPPLLSEIW 457
Score = 62.9 bits (146), Expect = 3e-09
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS--KYVCLAEKSCPVDXXXXXXXXXX 288
+LC VCGD A+ HY V +CEGCKGFF+R+V +G +Y C +C +D
Sbjct: 85 ELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARRYACRGGGTCQMDAFMRRKCQQC 144
Query: 289 XXXXCLAVGMVKEVVRTD 306
C GM ++ V ++
Sbjct: 145 RLRKCKEAGMREQCVLSE 162
>BC047750-1|AAH47750.1| 461|Homo sapiens nuclear receptor subfamily
1, group H, member 2 protein.
Length = 461
Score = 75.4 bits (177), Expect = 5e-13
Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 6/190 (3%)
Query: 375 FYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFC 434
F L S+ I FA++VPG+ L ED+ L ++ +E+ +L A R E +TF
Sbjct: 271 FTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFL 330
Query: 435 NGLVLDKRQCQRS--FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPH 491
K R+ ++++ + +FS + + +D + +A L A+ + + DR ++EP
Sbjct: 331 KDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPG 390
Query: 492 RVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLV 551
RVE LQ + L ++ F R+L L LR+LS +++F+L+L+D
Sbjct: 391 RVEALQQPYVEALLSY--TRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQD-K 447
Query: 552 PAPPLIENMF 561
PPL+ ++
Sbjct: 448 KLPPLLSEIW 457
Score = 62.9 bits (146), Expect = 3e-09
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS--KYVCLAEKSCPVDXXXXXXXXXX 288
+LC VCGD A+ HY V +CEGCKGFF+R+V +G +Y C +C +D
Sbjct: 85 ELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARRYACRGGGTCQMDAFMRRKCQQC 144
Query: 289 XXXXCLAVGMVKEVVRTD 306
C GM ++ V ++
Sbjct: 145 RLRKCKEAGMREQCVLSE 162
>BC033500-1|AAH33500.1| 461|Homo sapiens nuclear receptor subfamily
1, group H, member 2 protein.
Length = 461
Score = 75.4 bits (177), Expect = 5e-13
Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 6/190 (3%)
Query: 375 FYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFC 434
F L S+ I FA++VPG+ L ED+ L ++ +E+ +L A R E +TF
Sbjct: 271 FTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFL 330
Query: 435 NGLVLDKRQCQRS--FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPH 491
K R+ ++++ + +FS + + +D + +A L A+ + + DR ++EP
Sbjct: 331 KDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPG 390
Query: 492 RVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLV 551
RVE LQ + L ++ F R+L L LR+LS +++F+L+L+D
Sbjct: 391 RVEALQQPYVEALLSY--TRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQD-K 447
Query: 552 PAPPLIENMF 561
PPL+ ++
Sbjct: 448 KLPPLLSEIW 457
Score = 62.9 bits (146), Expect = 3e-09
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS--KYVCLAEKSCPVDXXXXXXXXXX 288
+LC VCGD A+ HY V +CEGCKGFF+R+V +G +Y C +C +D
Sbjct: 85 ELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARRYACRGGGTCQMDAFMRRKCQQC 144
Query: 289 XXXXCLAVGMVKEVVRTD 306
C GM ++ V ++
Sbjct: 145 RLRKCKEAGMREQCVLSE 162
>BC008831-1|AAH08831.1| 523|Homo sapiens RAR-related orphan
receptor A protein.
Length = 523
Score = 75.4 bits (177), Expect = 5e-13
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 208 ASSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKY 267
+S+S G++ T P C +CGD ++ HYGV TCEGCKGFF+R+ Q + Y
Sbjct: 51 SSTSRGISVTKKTHTSQIEIIP---CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATY 107
Query: 268 VCLAEKSCPVDXXXXXXXXXXXXXXCLAVGMVKEVVR 304
C +K+C +D CLAVGM ++ V+
Sbjct: 108 SCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVK 144
Score = 48.4 bits (110), Expect = 7e-05
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 370 EVIHQFYSL-LTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLED 428
EV+ Q ++ +T +I + FA+++ G+ +LC D+ L + LE+ +R+ ++
Sbjct: 317 EVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQN 376
Query: 429 TKLTFCNGLVLDKRQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGL 487
+ F D++ V +F +L SM + A A L++ DR L
Sbjct: 377 NTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWL 436
Query: 488 KEPHRVEQLQMKI 500
+E ++E+LQ KI
Sbjct: 437 QEKVKIEKLQQKI 449
>BC007790-1|AAH07790.1| 461|Homo sapiens nuclear receptor subfamily
1, group H, member 2 protein.
Length = 461
Score = 75.4 bits (177), Expect = 5e-13
Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 6/190 (3%)
Query: 375 FYSLLTTSIDMIKLFAEKVPGYGDLCPEDREQLFASARLELFVLRLAYRTRLEDTKLTFC 434
F L S+ I FA++VPG+ L ED+ L ++ +E+ +L A R E +TF
Sbjct: 271 FTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFL 330
Query: 435 NGLVLDKRQCQRS--FGDWLHAVLDFSNTLHSMDIDISTFACLCALTLIT-DRHGLKEPH 491
K R+ ++++ + +FS + + +D + +A L A+ + + DR ++EP
Sbjct: 331 KDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPG 390
Query: 492 RVEQLQMKIIGCLRAHMPXXXXXXXXAPHFSRVLGALPELRSLSVQGLQRIFSLKLEDLV 551
RVE LQ + L ++ F R+L L LR+LS +++F+L+L+D
Sbjct: 391 RVEALQQPYVEALLSY--TRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQD-K 447
Query: 552 PAPPLIENMF 561
PPL+ ++
Sbjct: 448 KLPPLLSEIW 457
Score = 62.9 bits (146), Expect = 3e-09
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 231 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGS--KYVCLAEKSCPVDXXXXXXXXXX 288
+LC VCGD A+ HY V +CEGCKGFF+R+V +G +Y C +C +D
Sbjct: 85 ELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARRYACRGGGTCQMDAFMRRKCQQC 144
Query: 289 XXXXCLAVGMVKEVVRTD 306
C GM ++ V ++
Sbjct: 145 RLRKCKEAGMREQCVLSE 162
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.319 0.134 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,455,526
Number of Sequences: 224733
Number of extensions: 3942346
Number of successful extensions: 16141
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 135
Number of HSP's that attempted gapping in prelim test: 14804
Number of HSP's gapped (non-prelim): 1002
length of query: 567
length of database: 73,234,838
effective HSP length: 94
effective length of query: 473
effective length of database: 52,109,936
effective search space: 24647999728
effective search space used: 24647999728
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 68 (31.5 bits)
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