GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002963-TA|BGIBMGA002963-PA|IPR004835|Fungal chitin
synthase
         (1492 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    29   0.28 

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 29.1 bits (62), Expect = 0.28
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 1/72 (1%)

Query: 140 VVFIAESLHTIGMGLLF-FKILPELDVVKGAMITNCLCIIPAVLGLLSRNSRDSKRFVKV 198
           V FIA  +HT+G  L+F F ++     V+  +      + PA   L   N R +K     
Sbjct: 325 VDFIAAGIHTLGNTLVFLFDLIGRNPTVQNKLYEETYALAPAGCDLTIDNLRKAKYLRAC 384

Query: 199 IVDMAAIVAQVT 210
           I +   ++   T
Sbjct: 385 ITESLRLIPTTT 396


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.139    0.422 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,675
Number of Sequences: 429
Number of extensions: 17536
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 30
Number of HSP's gapped (non-prelim): 1
length of query: 1492
length of database: 140,377
effective HSP length: 67
effective length of query: 1425
effective length of database: 111,634
effective search space: 159078450
effective search space used: 159078450
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 50 (24.2 bits)