GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002959-TA|BGIBMGA002959-PA|IPR000555|Mov34/MPN/PAD-1
         (934 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    26   1.6  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   6.6  

>AF388659-3|AAK71993.1|  548|Apis mellifera
          1D-myo-inositol-trisphosphate 3-kinaseisoform C
          protein.
          Length = 548

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 19 SGNPSI-ESEPLVCNPKEEVKNEKSCGSKKETAEEEKDEVASGEEFSDEESE 69
          S +PS+  S+P   + KE+ KN   C    E   + + E  + +E +D++ E
Sbjct: 43 SPSPSLLTSQPHQDHNKEKSKNNHHCNQDTEKLNQLEIESDNSKEVNDKKEE 94


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 455 GLLWHFIRDELGCSSENDDKMDLDALLAVPQP 486
           GL  H  R   G +S  DD++   +L   PQP
Sbjct: 534 GLCPHRRRANSGSTSSGDDELHRASLSKTPQP 565


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.312    0.129    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 255,381
Number of Sequences: 429
Number of extensions: 11131
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 3
length of query: 934
length of database: 140,377
effective HSP length: 64
effective length of query: 870
effective length of database: 112,921
effective search space: 98241270
effective search space used: 98241270
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 48 (23.4 bits)