GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002954-TA|BGIBMGA002954-PA|IPR007052|CS,
IPR008978|HSP20-like chaperone
         (178 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   5.2  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              21   6.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.1  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   9.1  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)

Query: 11  PEPDVFQGEDFTP 23
           P PDVF  ++F P
Sbjct: 455 PNPDVFDPDNFLP 467


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)

Query: 63 CRIGAGLDDRKTPQY 77
          CRI +G+D++K   +
Sbjct: 33 CRIDSGIDEKKEDDF 47


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/23 (34%), Positives = 11/23 (47%)

Query: 22  TPTEYEITSVRGKIPATERDPKD 44
           T    E  ++  K+P T R P D
Sbjct: 521 TTKSMEAANIMSKLPKTVRTPTD 543


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/29 (27%), Positives = 16/29 (55%)

Query: 19  EDFTPTEYEITSVRGKIPATERDPKDPKT 47
           ED+ P +     + GK+P  ++ P  P++
Sbjct: 419 EDWKPLDKCYFCLDGKLPHDDQPPLSPQS 447


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/17 (41%), Positives = 10/17 (58%)

Query: 32  RGKIPATERDPKDPKTI 48
           +G+I    +DP DP  I
Sbjct: 459 KGRITLNSKDPLDPPVI 475


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.315    0.134    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,398
Number of Sequences: 429
Number of extensions: 1971
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 178
length of database: 140,377
effective HSP length: 54
effective length of query: 124
effective length of database: 117,211
effective search space: 14534164
effective search space used: 14534164
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 41 (20.6 bits)