GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002952-TA|BGIBMGA002952-PA|IPR000152|Aspartic acid and
asparagine hydroxylation site, IPR013032|EGF-like region,
IPR000742|EGF-like, type 3, IPR001881|EGF-like calcium-binding,
IPR001791|Laminin G, IPR002126|Cadherin, IPR006209|EGF-like,
IPR012680|Laminin G, subdomain 2, IPR013111|EGF, extracellular,
IPR000233|Cadherin cytoplasmic region, IPR008985|Concanavalin A-like
lectin/glucanase, IPR006210|EGF
         (1695 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    28   0.75 
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    27   1.7  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     27   1.7  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    26   2.3  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    25   4.0  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    25   4.0  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase protein.
          Length = 693

 Score = 27.9 bits (59), Expect = 0.75
 Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 4/92 (4%)

Query: 1097 DDSTCQATGTIPPFNEYLNVNAPLQVGGLYIEHFDPTHYHW-QYMPIGKG-FDGCIRNLI 1154
            +  + +++ TIP    + N++    +GG  +E FD     W Q+M I KG  +G    L 
Sbjct: 543  EQKSTKSSVTIPFERTFRNLDENRPIGGDSLERFDFCGCGWPQHMLIPKGNKEGFAMELF 602

Query: 1155 HNSKLYDLAHPGLSRNSVAGCPQTEEVCNQAD 1186
                + D     + +N   GC      C   D
Sbjct: 603  --VMVSDYKDDRVEQNEPIGCKDASSYCGLRD 632


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
            protein.
          Length = 128

 Score = 26.6 bits (56), Expect = 1.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 1438 CTCGEGLTLTSDSKNCIDKN 1457
            C C +GL L SD   C++K+
Sbjct: 62   CACPDGLKLLSDGLMCVEKD 81


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 26.6 bits (56), Expect = 1.7
 Identities = 8/22 (36%), Positives = 16/22 (72%)

Query: 28  NLKENYTTVVIHVKDVNDNPPV 49
           NL+++ T  +IH+K++ D  P+
Sbjct: 99  NLRDSVTKYLIHLKEIEDTEPI 120


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
            protein.
          Length = 157

 Score = 26.2 bits (55), Expect = 2.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)

Query: 1438 CTCGEGLTLTSDSKNCIDK 1456
            C C +GL L SD   C++K
Sbjct: 62   CACPDGLKLLSDGLMCVEK 80


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 25.4 bits (53), Expect = 4.0
 Identities = 10/27 (37%), Positives = 18/27 (66%)

Query: 640 LIPIIIKDHGNPAMTGTSTLTVVIGDV 666
           L+P+++  +G   M+GT+TL V   D+
Sbjct: 157 LLPLLVWIYGGGFMSGTATLDVYNADI 183


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 25.4 bits (53), Expect = 4.0
 Identities = 10/27 (37%), Positives = 18/27 (66%)

Query: 640 LIPIIIKDHGNPAMTGTSTLTVVIGDV 666
           L+P+++  +G   M+GT+TL V   D+
Sbjct: 157 LLPLLVWIYGGGFMSGTATLDVYNADI 183


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.137    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 532,534
Number of Sequences: 429
Number of extensions: 25210
Number of successful extensions: 43
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 37
Number of HSP's gapped (non-prelim): 7
length of query: 1695
length of database: 140,377
effective HSP length: 67
effective length of query: 1628
effective length of database: 111,634
effective search space: 181740152
effective search space used: 181740152
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 50 (24.2 bits)