GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002923-TA|BGIBMGA002923-PA|undefined
         (108 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   3.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   3.3  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   4.3  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 9/24 (37%), Positives = 11/24 (45%)

Query: 5   FMMRMQCDVTPRAYSQTLHKRNEL 28
           F M     +TP+      HK NEL
Sbjct: 317 FDMARIIQITPKRIQYAQHKENEL 340


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 9/24 (37%), Positives = 11/24 (45%)

Query: 5   FMMRMQCDVTPRAYSQTLHKRNEL 28
           F M     +TP+      HK NEL
Sbjct: 355 FDMARIIQITPKRIQYAQHKENEL 378


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 7/21 (33%), Positives = 13/21 (61%)

Query: 62  RSPRPCTLVWRDVTVHVKLKN 82
           ++PRPC ++   +T    L+N
Sbjct: 190 KNPRPCNVLATSLTEPYTLRN 210


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.139    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,762
Number of Sequences: 429
Number of extensions: 1212
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 108
length of database: 140,377
effective HSP length: 50
effective length of query: 58
effective length of database: 118,927
effective search space:  6897766
effective search space used:  6897766
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.5 bits)
S2: 38 (19.4 bits)