GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002912-TA|BGIBMGA002912-PA|undefined
         (1131 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    25   3.5  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   8.0  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 25.0 bits (52), Expect = 3.5
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 670 DSCEAISDRPRVSFSETVSEPRFIAREDPYVESEAFYEELSRIDSSNEIEDLTKVQRKNE 729
           DS E   ++ R  +  T+S P F  R DPY +     + + R+D+     +       N 
Sbjct: 444 DSFEDAKEKFR-RWVSTMSRP-FEVRYDPYTQRVEILDSVDRLDNLMAQVNTEMTHLTNA 501

Query: 730 INK 732
           +NK
Sbjct: 502 VNK 504


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.8 bits (49), Expect = 8.0
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 333 LKLIAGTTCASSCMDTPTPSSGVLL 357
           L+LI  TTC +  +D P   SG  L
Sbjct: 389 LRLIPTTTCIARILDEPIELSGYRL 413


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.313    0.128    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 261,852
Number of Sequences: 429
Number of extensions: 9551
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 19
Number of HSP's gapped (non-prelim): 2
length of query: 1131
length of database: 140,377
effective HSP length: 65
effective length of query: 1066
effective length of database: 112,492
effective search space: 119916472
effective search space used: 119916472
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 49 (23.8 bits)