Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002898-TA|BGIBMGA002898-PA|IPR009038|GOLD,
IPR000348|emp24/gp25L/p24
(234 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 25 0.60
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 25 0.79
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 25 0.79
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 4.2
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 4.2
S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor prot... 22 5.6
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 5.6
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 22 5.6
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 7.4
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 7.4
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 7.4
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 7.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 7.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 7.4
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 25.0 bits (52), Expect = 0.60
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 170 NDILQYQYHSRARESRDYNLLLDNNIYVLRWSIIQIIAVTATGTLQVY 217
N+ +Y Y++ + +YN +NN L ++II I + + +Y
Sbjct: 326 NNNYKYNYNNNNYNNNNYNNNYNNNCKKLYYNIINIEQIPVPVPVPIY 373
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 24.6 bits (51), Expect = 0.79
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 125 AGKLVNLYLSVIRYDMWEKYAKEVEELDMNIKNFTSSIQFVERN 168
A K+VN YL R WE+ + + + K + +QF + N
Sbjct: 83 ANKVVN-YLKTKRPKDWERLSAKYDSTGEYKKRYEHGLQFAKNN 125
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 24.6 bits (51), Expect = 0.79
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 125 AGKLVNLYLSVIRYDMWEKYAKEVEELDMNIKNFTSSIQFVERN 168
A K+VN YL R WE+ + + + K + +QF + N
Sbjct: 83 ANKVVN-YLKTKRPKDWERLSAKYDSTGEYKKRYEHGLQFAKNN 125
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 22.2 bits (45), Expect = 4.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 167 RNINDILQYQYHSRARESRDYNLLLDNNIY 196
++I +I +Y Y S A + Y L L N Y
Sbjct: 656 QDIENIFKYGYVSHANQRNMYKLDLKNMKY 685
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 22.2 bits (45), Expect = 4.2
Identities = 7/31 (22%), Positives = 17/31 (54%)
Query: 159 TSSIQFVERNINDILQYQYHSRARESRDYNL 189
T + Q ++++L + +HS+ DY++
Sbjct: 478 TGTSQMYAEKLSELLGHAFHSQVLSMSDYDI 508
>S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor
protein.
Length = 168
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 56 YFQYVQPGATF 66
+F YVQP ATF
Sbjct: 134 FFIYVQPSATF 144
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 153 MNIKNFTSSIQFVERNINDILQYQYHSRARESRDYNLLL 191
M +K +S +R+IND+L Y + + N +L
Sbjct: 62 MTVKELANS---AKRDINDVLNVLYFINKNDKYEENTIL 97
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.8 bits (44), Expect = 5.6
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 89 GKIVHPYEWRQSAEYADQSSSGGYYAVCIDNQFSR 123
G+++ PY A Y D S Y + ID +F R
Sbjct: 105 GRLLQPYPDWSWANYKDCSGIVSAYKIAID-KFDR 138
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 7.4
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 142 EKYAKEVEELDMNIKNFTSSIQFVERNINDILQYQYHSRARESRDYNLLLDNNIY 196
++Y++ E + KN S ++ E + R+RE + + LL+N I+
Sbjct: 259 KRYSRSREREQKSYKNENSYRKYRETSKERSRDRTERERSREPKIISSLLNNTIH 313
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 7.4
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 142 EKYAKEVEELDMNIKNFTSSIQFVERNINDILQYQYHSRARESRDYNLLLDNNIY 196
++Y++ E + KN S ++ E + R+RE + + LL+N I+
Sbjct: 270 KRYSRSREREQKSYKNENSYRKYRETSKERSRDRTERERSREPKIISSLLNNTIH 324
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 7.4
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 142 EKYAKEVEELDMNIKNFTSSIQFVERNINDILQYQYHSRARESRDYNLLLDNNIY 196
++Y++ E + KN S ++ E + R+RE + + LL+N I+
Sbjct: 270 KRYSRSREREQKSYKNENSYRKYRETSKERSRDRTERERSREPKIISSLLNNTIH 324
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 7.4
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 142 EKYAKEVEELDMNIKNFTSSIQFVERNINDILQYQYHSRARESRDYNLLLDNNIY 196
++Y++ E + KN S ++ E + R+RE + + LL+N I+
Sbjct: 259 KRYSRSREREQKSYKNENSYRKYRETSKERSRDRTERERSREPKIISSLLNNTIH 313
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 75 GGDGMCGFAVRHPNGKIVHPYEWRQSA 101
GG A HPN ++H + + + A
Sbjct: 1720 GGAAEASAAGLHPNNTLLHSFMYHEHA 1746
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 75 GGDGMCGFAVRHPNGKIVHPYEWRQSA 101
GG A HPN ++H + + + A
Sbjct: 1716 GGAAEASAAGLHPNNTLLHSFMYHEHA 1742
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.322 0.136 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,457
Number of Sequences: 429
Number of extensions: 3113
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 14
length of query: 234
length of database: 140,377
effective HSP length: 56
effective length of query: 178
effective length of database: 116,353
effective search space: 20710834
effective search space used: 20710834
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 42 (21.0 bits)
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