GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002897-TA|BGIBMGA002897-PA|IPR001849|Pleckstrin-like
         (939 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     24   6.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   8.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   8.8  

>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 104 DPPHAKIASDVIACIVLVSFPLQSD-TENYGNKNVMEL 140
           DPP   + +   AC+     PL+ D  ++YG   + EL
Sbjct: 179 DPPEPPVPTVTSACVGSAYTPLKEDHDDHYGVPTLEEL 216


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 632 NNTDNSNHRISVFEPYPMRDTV 653
           ++TD+ N  +++ EPY  R TV
Sbjct: 880 SSTDSRNPALALAEPYNQRGTV 901


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 632 NNTDNSNHRISVFEPYPMRDTV 653
           ++TD+ N  +++ EPY  R TV
Sbjct: 918 SSTDSRNPALALAEPYNQRGTV 939


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.132    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,687
Number of Sequences: 429
Number of extensions: 8289
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 25
Number of HSP's gapped (non-prelim): 3
length of query: 939
length of database: 140,377
effective HSP length: 64
effective length of query: 875
effective length of database: 112,921
effective search space: 98805875
effective search space used: 98805875
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 48 (23.4 bits)