GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002877-TA|BGIBMGA002877-PA|undefined
         (278 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           27   0.18 
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           27   0.18 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   1.3  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   5.2  

>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 19  HAIPGEEDIAFIDVASNSMAKLPEKGILKKHG 50
           H  PG +D+ +++ +     K P+ GIL  HG
Sbjct: 69  HKPPGPKDLVYLEPSPPFCEKNPKLGILGTHG 100


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 19  HAIPGEEDIAFIDVASNSMAKLPEKGILKKHG 50
           H  PG +D+ +++ +     K P+ GIL  HG
Sbjct: 70  HKPPGPKDLVYLEPSPPFCEKNPKLGILGTHG 101


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 8/35 (22%), Positives = 24/35 (68%), Gaps = 1/35 (2%)

Query: 166 IRIRNLEDLIRQLEHHSSRHMSPSGSEDIRMSETE 200
           ++++ L  ++  ++H ++RH + +G + + +SET+
Sbjct: 209 VKLKELRIILEDIKHINTRHNTKNGMKTL-LSETD 242


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)

Query: 203 RHYRIEPGEIPPRC 216
           RHYR   GE P +C
Sbjct: 109 RHYRTHTGEKPYQC 122


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.313    0.133    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,641
Number of Sequences: 429
Number of extensions: 3732
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 4
length of query: 278
length of database: 140,377
effective HSP length: 57
effective length of query: 221
effective length of database: 115,924
effective search space: 25619204
effective search space used: 25619204
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 43 (21.4 bits)