GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002876-TA|BGIBMGA002876-PA|IPR001762|Disintegrin,
IPR013032|EGF-like region, IPR006586|ADAM, cysteine-rich,
IPR000742|EGF-like, type 3, IPR001590|Peptidase M12B, ADAM/reprolysin,
IPR013111|EGF, extracellular
         (485 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    25   1.1  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    25   1.9  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              24   3.3  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   4.3  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    23   5.7  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    23   5.7  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    22   10.0 

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 403 PSPTPYVPENATKAAYNMTKKE-TPY-ENYHGSN 434
           P  TPY  +N+T A ++ T K   P  ENY   N
Sbjct: 421 PERTPYQWDNSTSAGFSQTNKTWLPVNENYKSLN 454


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
            protein.
          Length = 1124

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)

Query: 405  PTPYVPENATKAAYNMTKKETPY-ENYH 431
            PT Y+ E++ K  Y   +KE P+ E  H
Sbjct: 977  PTEYLLEDSMKQQYGKRRKEPPWLEGVH 1004


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 6/40 (15%)

Query: 87  SKNDYINDLRVGQGLCL----LNKP--NECGNGKLDEGEE 120
           S  D+ N +R+GQ +C+    +NK   N+  +GK++  +E
Sbjct: 18  SIKDFQNAIRMGQSICMAKTGINKQIINDVNDGKINIEDE 57


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 10/47 (21%), Positives = 19/47 (40%)

Query: 64  HGCIMAQSIVGSDNVQPYKFSDCSKNDYINDLRVGQGLCLLNKPNEC 110
           H C   +        Q  ++  C+KN   + LR+ +  C   +  +C
Sbjct: 82  HSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKC 128


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 12/27 (44%), Positives = 13/27 (48%), Gaps = 4/27 (14%)

Query: 148 QCASGE----CCERCQNFGPEFEPLPL 170
           +C S E    C  RCQ F P   P PL
Sbjct: 36  KCPSNEIFSRCDGRCQRFCPNVVPKPL 62


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 12/27 (44%), Positives = 13/27 (48%), Gaps = 4/27 (14%)

Query: 148 QCASGE----CCERCQNFGPEFEPLPL 170
           +C S E    C  RCQ F P   P PL
Sbjct: 36  KCPSNEIFSRCDGRCQRFCPNVVPKPL 62


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 8/32 (25%), Positives = 16/32 (50%)

Query: 79  QPYKFSDCSKNDYINDLRVGQGLCLLNKPNEC 110
           Q  ++  C+KN   + LR+ +  C   +  +C
Sbjct: 48  QKIQYRPCTKNQQCSILRINRNRCQYCRLKKC 79


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.137    0.454 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,591
Number of Sequences: 429
Number of extensions: 8073
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 7
length of query: 485
length of database: 140,377
effective HSP length: 60
effective length of query: 425
effective length of database: 114,637
effective search space: 48720725
effective search space used: 48720725
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)