GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002874-TA|BGIBMGA002874-PA|undefined
         (61 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   0.38 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   0.38 
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    21   1.5  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       20   2.0  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    20   2.7  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    19   3.5  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    18   8.2  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    18   8.2  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    18   8.2  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 0.38
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 8    VERLLREYRQNQELVRNIGAHYYQIIYPVQLRHHEKMG 45
            ++R ++E ++NQ+        YY  I+ V L+     G
Sbjct: 1644 MQRPMKESQENQQNAETQRERYYATIHKVALQQAANTG 1681


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 0.38
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 8    VERLLREYRQNQELVRNIGAHYYQIIYPVQLRHHEKMG 45
            ++R ++E ++NQ+        YY  I+ V L+     G
Sbjct: 1640 MQRPMKESQENQQNAETQRERYYATIHKVALQQAANTG 1677


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)

Query: 12  LREYRQNQELVRNIGAH 28
           ++  +  Q L+RN+G H
Sbjct: 281 IKPRKHEQRLLRNVGVH 297


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)

Query: 29  YYQIIYPVQLRHHEKMG 45
           YY +I P+QL   +K G
Sbjct: 137 YYAVIKPLQLWDVDKRG 153


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query: 9   ERLLREYRQNQELVRNIGAHYYQIIYPVQLRHHEKM 44
           ER     R+N  L+ NI   +    +  + RHH+ +
Sbjct: 744 ERAADMKRRNGALIYNILPPHVAAYFLSRARHHDDL 779


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic
          acetylcholine receptor beta1subunit protein.
          Length = 520

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 19 QELVRNIGAHYYQIIYPVQ 37
          + LVR++   Y ++I PVQ
Sbjct: 28 ERLVRDLFRGYNKLIRPVQ 46


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 7/17 (41%), Positives = 10/17 (58%)

Query: 4   SPGEVERLLREYRQNQE 20
           +P   +RLL  Y QN +
Sbjct: 299 APFHAQRLLAVYAQNSK 315


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 26  GAHYYQIIY 34
           G HY +I+Y
Sbjct: 291 GTHYVKIVY 299


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 26  GAHYYQIIY 34
           G HY +I+Y
Sbjct: 306 GTHYVKIVY 314


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.138    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,825
Number of Sequences: 429
Number of extensions: 387
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 61
length of database: 140,377
effective HSP length: 41
effective length of query: 20
effective length of database: 122,788
effective search space:  2455760
effective search space used:  2455760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.1 bits)
S2: 35 (18.2 bits)