GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002854-TA|BGIBMGA002854-PA|IPR002213|UDP-
glucuronosyl/UDP-glucosyltransferase
         (450 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    25   0.98 
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   4.0  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   4.0  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   4.0  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 25.4 bits (53), Expect = 0.98
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 194 ILPLPPNTKYVGGHHIELPSKALPQNLQDLLDNAKHGAILFS 235
           +LP P +        IE P+K LP     L  N+K G  LFS
Sbjct: 653 LLPRPISCHTTPDSFIEAPNKTLPSLPSTLTKNSKQG--LFS 692


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 284 LRILNHNNTVLLITNGGTTSLLEAAYFGVPVI 315
           L+ +  NN  L + +GG+       Y  VP+I
Sbjct: 427 LKAIKENNADLTVVSGGSVLRATKEYNTVPII 458


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 284 LRILNHNNTVLLITNGGTTSLLEAAYFGVPVI 315
           L+ +  NN  L + +GG+       Y  VP+I
Sbjct: 427 LKAIKENNADLTVVSGGSVLRATKEYNTVPII 458


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 284 LRILNHNNTVLLITNGGTTSLLEAAYFGVPVI 315
           L+ +  NN  L + +GG+       Y  VP+I
Sbjct: 427 LKAIKENNADLTVVSGGSVLRATKEYNTVPII 458


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.135    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,892
Number of Sequences: 429
Number of extensions: 5542
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 4
length of query: 450
length of database: 140,377
effective HSP length: 60
effective length of query: 390
effective length of database: 114,637
effective search space: 44708430
effective search space used: 44708430
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)