GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002852-TA|BGIBMGA002852-PA|IPR007114|Major facilitator
superfamily, IPR011701|Major facilitator superfamily MFS_1,
IPR003663|Sugar transporter
         (479 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    25   1.4  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    25   1.8  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    25   1.8  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    25   1.8  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    25   1.8  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   5.6  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   7.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   9.8  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 7/53 (13%), Positives = 30/53 (56%)

Query: 282 ISEITGSKSQSYYYTLCIDAIITVSAVCSSILVNVMRRRTLLLSTGLAACSVL 334
           IS++   ++ +  YT  +++ +TV+   + + +N+    ++++ +  +  +++
Sbjct: 518 ISKLVNKRNNAKIYTSSVNSNLTVNQTVNPVAINIPGDTSIIVDSSTSGATIV 570


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 27/131 (20%), Positives = 56/131 (42%), Gaps = 6/131 (4%)

Query: 152 VHILGHFYDWRTIAMQAMTPYIISLAIIWTWPESPAWLASKQNYEKCEKNFYYLRGNAAE 211
           V  L  FYD   +++Q +   +     +  W E   W      Y +  ++  +L  +   
Sbjct: 73  VSALSSFYDRTKMSLQLVLAALYPPNKLQQWNEDLNWQPIATKYLRRYEDNIFLPEDCLL 132

Query: 212 AQRELEDMLQSQMSRASQTTKQLSLRQKMIEFFKKFTKKNFLGPM-FILLSSTVLLEASG 270
              EL+ +L+S   +  + +K   L++K+    +++T KN   P  +  +  T++ E S 
Sbjct: 133 FTIELDRVLESPRGK-YEFSKYDKLKKKL----EEWTGKNITTPWDYYYIYHTLVAEQSY 187

Query: 271 RHIFPAYALQI 281
               P++   I
Sbjct: 188 GLTLPSWTNNI 198


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 27/131 (20%), Positives = 56/131 (42%), Gaps = 6/131 (4%)

Query: 152 VHILGHFYDWRTIAMQAMTPYIISLAIIWTWPESPAWLASKQNYEKCEKNFYYLRGNAAE 211
           V  L  FYD   +++Q +   +     +  W E   W      Y +  ++  +L  +   
Sbjct: 88  VSALSSFYDRTKMSLQLVLAALYPPNKLQQWNEDLNWQPIATKYLRRYEDNIFLPEDCLL 147

Query: 212 AQRELEDMLQSQMSRASQTTKQLSLRQKMIEFFKKFTKKNFLGPM-FILLSSTVLLEASG 270
              EL+ +L+S   +  + +K   L++K+    +++T KN   P  +  +  T++ E S 
Sbjct: 148 FTIELDRVLESPRGK-YEFSKYDKLKKKL----EEWTGKNITTPWDYYYIYHTLVAEQSY 202

Query: 271 RHIFPAYALQI 281
               P++   I
Sbjct: 203 GLTLPSWTNNI 213


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 158 FYDWRTIAMQAMTPYIISLAIIWTWPESPAWLASKQ-NYEKCEKNF 202
           F +W     +A  P + SL    TWP  P+    K  N +  E NF
Sbjct: 260 FINWHEPIPEAYFPKLDSLVASRTWPFRPSGTVLKDINRQVDELNF 305


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 17/66 (25%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 152 VHILGHFYDWRTIAMQAMTPYII--SLAIIWTWPESPAWLASKQNYEKCEKNFYYLRGNA 209
           + +LG   DW   A   + P  +     +  T       L     Y +  +   YLRG  
Sbjct: 679 IWLLGSRLDWEDHASSPLEPSAVPSKFCLSVTLLTVATSLVIVSRYAEKSRRMLYLRGRE 738

Query: 210 AEAQRE 215
             AQRE
Sbjct: 739 VVAQRE 744


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 13  AVLLNMVGQGMLLSYTTSLLPALQAPDSPIPIDL 46
           A ++NM G G +   T   L A  AP+  + + L
Sbjct: 248 AAVMNMTGAGYVWIVTEQALDASNAPEGLLGLKL 281


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 81  FILMVPGLLGWLLIYAGNTVPVLLMGRLLG 110
           +I MV  LLG ++ Y G+   V+  G  +G
Sbjct: 93  WITMVYSLLGIIIAYTGDVHGVIGAGHWIG 122


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 8/20 (40%), Positives = 11/20 (55%)

Query: 169  MTPYIISLAIIWTWPESPAW 188
            + PY+ + A I TW E   W
Sbjct: 1178 LRPYLRTAAAILTWNEKRFW 1197


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.325    0.139    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,604
Number of Sequences: 429
Number of extensions: 4865
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 8
length of query: 479
length of database: 140,377
effective HSP length: 60
effective length of query: 419
effective length of database: 114,637
effective search space: 48032903
effective search space used: 48032903
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 45 (22.2 bits)