GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002850-TA|BGIBMGA002850-PA|undefined
         (96 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   3.0  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    20   5.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 3.0
 Identities = 13/49 (26%), Positives = 21/49 (42%)

Query: 28  TAQHSTAQRSAVSHVGSRTYVVQQTAGPTALLRSLLMLGTSTRMSQGNN 76
           T  +  A      H  +  Y+V + A    LL  +   G S  +++GNN
Sbjct: 833 TYDYHGAWERQTGHNFTMEYLVSRGAPRGKLLVGVPFYGQSFTLTKGNN 881


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 19.8 bits (39), Expect = 5.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 15  YVSTAQHSAAQRSTAQHSTAQRS 37
           Y+S   HSAA R+ ++ + +  S
Sbjct: 113 YLSPLFHSAAPRTASRETKSSES 135


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.313    0.119    0.322 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,228
Number of Sequences: 317
Number of extensions: 541
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 96
length of database: 114,650
effective HSP length: 48
effective length of query: 48
effective length of database: 99,434
effective search space:  4772832
effective search space used:  4772832
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.8 bits)
S2: 37 (19.0 bits)