Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002849-TA|BGIBMGA002849-PA|IPR001007|von Willebrand
factor, type C, IPR009041|Proteinase inhibitor, PMP and SGCI,
IPR009030|Growth factor, receptor
(1038 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 33 0.21
SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1... 31 0.83
SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 31 1.1
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 30 1.5
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 30 1.9
SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 29 2.5
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 29 2.5
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 3.4
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 29 3.4
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 29 4.4
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 4.4
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 5.9
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 28 7.7
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 28 7.7
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 33.1 bits (72), Expect = 0.21
Identities = 55/259 (21%), Positives = 99/259 (38%), Gaps = 20/259 (7%)
Query: 459 SETFTINVTSSLVTNTSQTKPPIVSASKPIPNDMVDAANTSKKTKGDYDY---DYTEPTL 515
+E I+ +S ++S + +S P N+ N ++KG+ Y EP+
Sbjct: 21 TEVTRISNSSDHFEDSSSNVDESLDSSNPSSNEKASHTNEEYRSKGNQSYVPSSSNEPS- 79
Query: 516 PPSLPNLKIIPFVAADAVVDDETSKATLTYPILEREDKFPVYYPTSDTKDTL----FATR 571
P S N +D+ D++S L E + F + + KD+L TR
Sbjct: 80 PESSSN--------SDSSSSDDSSVDRLAGDPFELGENFNLKHYLRAYKDSLQRDDIITR 131
Query: 572 REDVYPPKYPVFISNKGAEYPSLLPEINLSNSAFGSSSNDLEYTVPTALDDQANVPKVMT 631
V + V+ G E+ P+I L + +E + + AN +++
Sbjct: 132 SSGVCMRDHSVYGVGSGYEFLKTFPDIFLQPYRAITEKQVVEKAILSHCHALANAGELVM 191
Query: 632 A--KPSSEPSKYEVDTPAISLFSPPAETEGGFVPKDPEDIDKYYA--VYPSPAPGPSIPH 687
+P S S + + ++ E + D D+ K++ + S P
Sbjct: 192 VLGQPGSGCSTFLRSVTSDTVHYKRVEGTTHYDGIDKADMKKFFPGDLLYSGENDVHFPS 251
Query: 688 LTTSMQLDVAKECITSDGR 706
LTT+ LD A +C T + R
Sbjct: 252 LTTAETLDFAAKCRTPNNR 270
>SPBC947.11c |elg1||DNA replication factor C complex subunit
Elg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 920
Score = 31.1 bits (67), Expect = 0.83
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 299 SGDNEDRSFHDMKTIGLESTTGSIITKINTPSTVITNDLVATTKVKRKTDEISNLQS 355
S D +F K+ G S T ++ IN+ TV ++ LV+ D SNL++
Sbjct: 114 SNDTNSTAFPPAKSSGEASDTNILVENINSQETVNSSPLVSELHYSNLADSPSNLRN 170
>SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 343
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 561 SDTKDTLFATRREDVYPPKYPVFISNKGAEYPS-LLPEINLSNSAFGSSSNDLEYT--VP 617
S + D+L +T D P YPVF S+ PS +L + ++++A +++D Y+
Sbjct: 2 SISNDSLASTVPGDELPSSYPVFSSDFSYIKPSHVLDVVTVTSTAGPEATDDPSYSGFYS 61
Query: 618 TALDDQANVPKVMTAKPSSEPS 639
T + Q P + PS+ S
Sbjct: 62 TVISTQNPEPTSASTPPSASAS 83
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 4/99 (4%)
Query: 458 ESETFTINVTSSLVTNTSQTKPPIVSASKPIPNDMVDAANTSKKTKGDYDYDYTEPTLPP 517
E E +N+ S + + TK PI S DM DAA + + + + P
Sbjct: 445 EKEDEHLNLQGSFIEES--TKQPISSKPSTSSPDMTDAATGGRVSSSSFRDKILQTNFSP 502
Query: 518 --SLPNLKIIPFVAADAVVDDETSKATLTYPILEREDKF 554
++ + I +DE + L PI E++ KF
Sbjct: 503 RSTIDSFSNISKKRNSEEANDENDETNLKIPIPEKKRKF 541
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 408 SSTKIPYNTTLNETNIFDVQPRIPIVNTDDFEPQTYPPNDIITDRTLGFDESETFTINVT 467
S T IP + +N TN + + P V+T P P+D+ + D + ++VT
Sbjct: 272 SLTNIPTISNVNATNFHPLHSQQPYVDT----PGIDAPSDLEAKFS---DLGVSSVVSVT 324
Query: 468 SSLVTNTSQTKPPIVS-ASKPIPND 491
S L + T+ PP+ S AS P++
Sbjct: 325 SPLQSCTNSPSPPLSSPASSASPSE 349
>SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 362
Score = 29.5 bits (63), Expect = 2.5
Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 2/115 (1%)
Query: 432 IVNTDDFEPQTYPPNDIITDRTLGFDESETFTINVTSSLVTNTSQTKPPIVSASKPIPND 491
+ D+F +DI + +E I +S + Q + I+ KP+P D
Sbjct: 140 LYGADEFSSDEEEMDDISVTSSEEEEEENGARIEELNSDEEDAEQAEEEILE--KPVPKD 197
Query: 492 MVDAANTSKKTKGDYDYDYTEPTLPPSLPNLKIIPFVAADAVVDDETSKATLTYP 546
V ++ K K + T + S+ K A + ++ SK+T TYP
Sbjct: 198 EVAEKHSKDKLKKEEKEKKTAVDVSDSVNGKKRKTEPAGEGEQTEKKSKSTKTYP 252
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 595 LPEINLS-NSAFGSSSNDLE---YTVPTALDDQANVPKVMTAKPSSEPSKYEVDTPAISL 650
L INL N SN L ++ PTA +VP +A+ +++ S E+ I
Sbjct: 65 LMSINLQKNLTPNGDSNTLTPDTFSDPTAPSSAQSVPPTSSAETTADNSDTEMKLNPIPA 124
Query: 651 FSPPAETEG 659
+S PA+T G
Sbjct: 125 YSVPADTTG 133
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.1 bits (62), Expect = 3.4
Identities = 47/174 (27%), Positives = 62/174 (35%), Gaps = 15/174 (8%)
Query: 463 TINVTSSLVTNTSQTKPPIVSASKPIPNDMVDAANTSKKTKGDYDYDYTEPTLPPSLP-- 520
T TSS TS P SAS P+ N V A TS T ++ PT S P
Sbjct: 617 TSTFTSSGFNTTSGL--PTSSASTPLSNSTV--APTSTFTSSGFNTTSGLPTSSASTPSS 672
Query: 521 NLKIIP---FVAADAVVDDETSKATLTYPILEREDKFPVYYPTSDTKDTLFATRREDVYP 577
N I+P F ++ ++ + P L P TS +T V
Sbjct: 673 NSSIVPTSTFTSSGFNTTSGLPTSSASTP-LSNSTVAPTSTFTSSGFNTTSGLPTSSVST 731
Query: 578 P-----KYPVFISNKGAEYPSLLPEINLSNSAFGSSSNDLEYTVPTALDDQANV 626
P YP S+ + S L + FGS+S T PT Q +V
Sbjct: 732 PLSNSSAYPSSGSSTFSRLSSTLTSSIIPTETFGSTSGSATGTRPTGSSSQGSV 785
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 29.1 bits (62), Expect = 3.4
Identities = 51/229 (22%), Positives = 85/229 (37%), Gaps = 14/229 (6%)
Query: 593 SLLPEINLSNSAFGSSSNDLEYTVPTALDDQANVPKVMTAKPSSEPSKYEVDTPAISLFS 652
S L I S+ S S+ T+LD + K + A P E ++ E+ I F+
Sbjct: 17 SKLKNIKKSSKRNNSQSSTEPRKNATSLDSKKTTKKGV-ALP--EIAERELTQEDIEFFN 73
Query: 653 PPAETEGGFVPKDPEDIDKYYAVYPSPAPGPSIPHLTTSMQLDVAKECITSDGRRVKDGH 712
+ +PED+ K P P I L S Q ++ ++SD V D
Sbjct: 74 ENPSSLKYLSSINPEDLGKKV----EKGPRPDIYDLKKSQQFELDTSRLSSDEESVLDYS 129
Query: 713 KTSVWCSNCACQDRELRCIPRDCSVPSGCNRLPITSEAKDLCCGDLVCNSVESXXXXXXX 772
K S QD ELR NRLPI + KD ++V +
Sbjct: 130 KDSE-----DEQDYELRPRVSSSWNNESYNRLPI--KTKDGLLQNVVADVNNGEEFLSES 182
Query: 773 XXENQIVDDTRVKVEKFSIKQKNDSQSQTDNQHELKTEQNIKPVEVNSV 821
E + D+ +K EK ++ + + ++K ++ ++ +
Sbjct: 183 ESEASLEIDSDIKDEKQKSLEEQKIAPEIPVKQQIKNDKEALGIQAQQL 231
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 28.7 bits (61), Expect = 4.4
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Query: 573 EDVYPPKYPVFISNKGAEYPSLLPEINLSNSAFGSSSNDLEYTVPTALDDQANVPKVMTA 632
E++ PPK + S LP NL + S + E ++P D A +T+
Sbjct: 535 EELDPPKITTIDGESPSSISSRLPSSNLEQGSSSSVTKSPE-SMP---DPSAKASSPVTS 590
Query: 633 KPSSEPSKYEVDTPAISLFSP-PAETEG 659
K S K V+ A L P P +T+G
Sbjct: 591 KGVSINEKSAVNNYATPLSKPQPKDTKG 618
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 28.7 bits (61), Expect = 4.4
Identities = 40/217 (18%), Positives = 84/217 (38%), Gaps = 9/217 (4%)
Query: 285 IVTYSYKAPNSLLGSGDNEDRSFHDMKTIGLESTTGSIITKINTPSTVITNDLVATTKVK 344
++ +Y + +S + S + ++S + T STT + ++ ST+ +D + +
Sbjct: 184 VIATAYTSASSTILSSPSVEQSTPSIITQTESSTTTEGSSVASSESTIANSDQSSFITYE 243
Query: 345 RKTDEISNLQSAKPDNXXXXXXXXXXXXXXXXXXXXXXEKSVEQSEGTVKIMVNGTINCT 404
+ +N A + + SE T +G N T
Sbjct: 244 STQNPTANKTDASQQSTESTSSSASAYSYITTLQTATTAQQTT-SENTYS--TSGP-NLT 299
Query: 405 AELSSTKIPYNTTLNETNIFDVQPRIPIVN---TDDFEPQTYPPNDIITDRTLGFDESET 461
+S +I ++T++ ++ P + + T T N II+ + D + +
Sbjct: 300 TSNTSPQI--SSTISSSSFIVESPSVALSTSSTTTITNASTPAANTIISRSSKPTDTTNS 357
Query: 462 FTINVTSSLVTNTSQTKPPIVSASKPIPNDMVDAANT 498
+ T+ T+T T P V++S PI + V ++T
Sbjct: 358 ISFANTTPENTSTQITSPTAVNSSTPITSSSVLNSST 394
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 5.9
Identities = 37/166 (22%), Positives = 51/166 (30%), Gaps = 19/166 (11%)
Query: 95 LQCICSSGALTCRRRACAPLPDPP-----PRKCHAVYRKGSCCPELQ----CPVF--PAC 143
L C C L P+PD P P+ CH K +C P + CP F C
Sbjct: 620 LPCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHPQVKHNCHPTSEPCPPCPYFVKKRC 679
Query: 144 VEGGTVYAAGSALRPTAACESCFCLQAEXXXXXXXXXXXXXXXXXXXASGACCPQRYYCQ 203
+ G + R C C +R YC+
Sbjct: 680 LCGKHILENQPCYRENVRCGELCNKLLSCKTHFCEKLCHPDGECESSCKKECGKRRMYCE 739
Query: 204 HAYSPHKNSTHDCQVKGAWVPEGQRVKKSEENSCSQCFCLRGAVRC 249
H ++ H C + +P K E SC +C +R V C
Sbjct: 740 HVCQSPCHAGHPCDER---IP----CKAPLEVSC-ECGRIRKKVTC 777
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Query: 463 TINVTSSLVTNTSQTKPPIVSASKPIPNDMVDAANTSKK--TKGDYDYDYTEP 513
T NV SSL +N +T P V SK D K T DYD P
Sbjct: 467 TPNVLSSLSSNLGKTNPTSVYQSKANVTTSADVEKPQVKVATSSRVDYDLKSP 519
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 581 PVFISNKGAEYPSLLPEINLSNSAFGSSSNDLEYTVPTALDDQANVPKVMTAKPSSEP 638
PVF K PS +N S SN+ E ++P+ +V KPSS P
Sbjct: 440 PVFTPGKFT-IPSKPAPVNASRPMMPQQSNNSEASIPSTTPQSPSVVSNGENKPSSSP 496
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.132 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,382,302
Number of Sequences: 5004
Number of extensions: 185288
Number of successful extensions: 572
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 561
Number of HSP's gapped (non-prelim): 23
length of query: 1038
length of database: 2,362,478
effective HSP length: 80
effective length of query: 958
effective length of database: 1,962,158
effective search space: 1879747364
effective search space used: 1879747364
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)
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