Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002849-TA|BGIBMGA002849-PA|IPR001007|von Willebrand
factor, type C, IPR009041|Proteinase inhibitor, PMP and SGCI,
IPR009030|Growth factor, receptor
(1038 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0591 - 24159654-24160155,24160233-24160316,24160898-241609... 40 0.014
08_02_1236 + 25454371-25456801,25456891-25457177,25457258-254574... 36 0.13
02_05_1273 + 35381626-35382486,35382567-35382691,35384851-353854... 33 1.2
02_05_0255 - 27184306-27184914,27185009-27185272 33 1.2
09_04_0180 + 15367737-15367755,15368874-15369739 33 1.6
01_06_0102 - 26447286-26448107,26448248-26448385,26448990-264493... 33 1.6
12_02_0142 - 14306325-14306490,14306584-14306687,14306788-143069... 32 2.7
02_05_0763 + 31583449-31583747,31584095-31584230,31584544-315845... 32 2.7
01_06_1156 + 34974727-34974833,34975110-34975217,34978124-34978706 31 3.6
12_02_1147 - 26459481-26460124,26460241-26460382,26461658-264616... 31 4.8
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 31 6.3
>02_04_0591 -
24159654-24160155,24160233-24160316,24160898-24160944,
24161035-24161103,24161259-24161310,24161693-24161775,
24162312-24162422,24162808-24163211,24163308-24163380,
24163460-24163510,24163882-24164073,24164176-24164302,
24164753-24164934,24165023-24165226,24165738-24165836
Length = 759
Score = 39.5 bits (88), Expect = 0.014
Identities = 53/236 (22%), Positives = 88/236 (37%), Gaps = 23/236 (9%)
Query: 606 GSSSNDLEYTVPTALDDQANVPKVMTAKPSSEPSKYEVDTPAISLFSPPAETEGGFVPKD 665
G+S N+ + + T +D ++V + M A PS K VD +S T +P++
Sbjct: 235 GTSLNEYDNIIATICEDSSDVKEDMDADPSG---KDVVDDGKLS-----ERTISDELPQE 286
Query: 666 PEDIDKYYAVYPSPAPGPSIPHLTTSMQLDVAKECITSDGRRVKDGHKTSVWCSNCACQD 725
P +++ + G + T KE D + KDG K S +N A +
Sbjct: 287 PAKLEQDVTQTTAIGSGATPVDNGTESAAANPKELSNPDSEK-KDGVKQSAKVANGASAE 345
Query: 726 RELRCIPRDCSVPSGCNRLPITSEAKDLCCGDLVCN--SVESXXXXXXXXXENQIVDDTR 783
R V S R P + G V VE + DD++
Sbjct: 346 TSERVDGSPAMVKSKRGRPPGLKSLEKKAAGKKVLGLKKVEETTDSTGKLSKQSSKDDSK 405
Query: 784 V------------KVEKFSIKQKNDSQSQTDNQHELKTEQNIKPVEVNSVKDVTDG 827
K +K S+KQK+++ S+ D +L ++ + P V+ T G
Sbjct: 406 SSTRKASGAGSSKKQQKISLKQKDETDSKEDTAKDLSLKEMVSPKSVSKGSAKTKG 461
>08_02_1236 + 25454371-25456801,25456891-25457177,25457258-25457416,
25457561-25457740,25457823-25458017,25459059-25459157,
25459508-25460137,25460250-25460591
Length = 1440
Score = 36.3 bits (80), Expect = 0.13
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 574 DVYPPKYPVFISNKGAEYPSLLPEINLSNSAFGSSSNDLEYTVPTALDDQANVPKVMTAK 633
D PP+ P + SN+ P LLP + SA S + + P + ++ P V+ +
Sbjct: 1158 DEVPPEIPRY-SNRMQSNPPLLPVPSTHASASASEATPAKPASPVTVVEEKTFP-VLQSS 1215
Query: 634 PSSEPSKYEVDTPAISLFSPPAETEGGFVPKDPEDIDK 671
SS+PSK P + S +T G +P + ED++K
Sbjct: 1216 QSSKPSK-----PKVVGNSSSKDTPGAPIP-EREDVEK 1247
>02_05_1273 +
35381626-35382486,35382567-35382691,35384851-35385450,
35385550-35385841,35386199-35386364,35386664-35386707,
35386866-35386979,35387171-35387290,35387541-35387626,
35388340-35388502
Length = 856
Score = 33.1 bits (72), Expect = 1.2
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Query: 77 YGGRWFSDGGEVDTREACLQCICSSGALTCRRRACAPLPDPPPR--KCHAVYRKGSCCPE 134
+G WF G + R AC + I G + + PPP CH GS P
Sbjct: 782 WGVAWFDTRGALALRGACTRVISIPGKMAMQNGGGDEWSPPPPACIACHGQSHGGSSNPS 841
Query: 135 LQCPV 139
LQ V
Sbjct: 842 LQSKV 846
>02_05_0255 - 27184306-27184914,27185009-27185272
Length = 290
Score = 33.1 bits (72), Expect = 1.2
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Query: 587 KGAEYPSLLPEINLSNSAFGSSSNDLEYTVPTALDDQANVPKVMTAKPSSEPSKYEV--D 644
+G + SLL +++ S+S+ SSS++ E +DD V K K E K ++
Sbjct: 68 EGEKKESLLSKLHRSSSSSSSSSDEEE----EVIDDNGEVVKRKKKKGLKEKIKEKLPGH 123
Query: 645 TPAISLFSPPAETEGGFVPKDPEDIDKYYAVYPSPAPGPSIPH 687
+PP G P P + P+PAP P + H
Sbjct: 124 KDHAGEHAPPPAATGFPAPAPPASV---VTAAPTPAPAPVVTH 163
>09_04_0180 + 15367737-15367755,15368874-15369739
Length = 294
Score = 32.7 bits (71), Expect = 1.6
Identities = 20/81 (24%), Positives = 36/81 (44%)
Query: 611 DLEYTVPTALDDQANVPKVMTAKPSSEPSKYEVDTPAISLFSPPAETEGGFVPKDPEDID 670
++E + L+ + VP + T PS P E+D + P A+ + G P+ +++
Sbjct: 63 EVEAELEAELELELLVPPIPTPAPSPIPRPPELDPEPKAETDPEADPKPGLDPEPDTNVE 122
Query: 671 KYYAVYPSPAPGPSIPHLTTS 691
+ P P P +P T S
Sbjct: 123 PDLELEPEPPPPRPMPIPTPS 143
>01_06_0102 - 26447286-26448107,26448248-26448385,26448990-26449359,
26449505-26449606,26449696-26449788,26449934-26450181,
26451088-26451274,26451825-26452043,26452464-26452660,
26453545-26453875,26454099-26454457,26455141-26455240,
26455349-26455464,26455547-26455663,26455782-26455880,
26456057-26456131,26456205-26456286,26457724-26457763,
26458685-26458769,26458924-26459055
Length = 1303
Score = 32.7 bits (71), Expect = 1.6
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 607 SSSNDLEYTVPTALDDQANVPKVMTAKPSSEPSKYEVDTPAISLFSPPAETEGGFVPKDP 666
++ ++E T A D +N A P+ D PA++ P T G + P
Sbjct: 1225 AAPGNVEGTAAAATDATSNADATSGA-PAPAADSNGADPPAVT---PGQVTNGAPSTETP 1280
Query: 667 EDIDKYYAVYPSPAPG-PSIP 686
E DK + PSPAP P++P
Sbjct: 1281 ETADKPSSTEPSPAPPIPNVP 1301
>12_02_0142 -
14306325-14306490,14306584-14306687,14306788-14306967,
14307155-14307253,14307346-14307535,14307722-14307748,
14308190-14308506,14308532-14308675,14308799-14308905,
14309085-14309357,14309470-14309827
Length = 654
Score = 31.9 bits (69), Expect = 2.7
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 632 AKPSSEPSKYEVDTPAISLFSPPAETEGGFVPKDPEDIDKYYAVYPS 678
A+ S+PS E A + P E GG+VP P +D Y Y S
Sbjct: 311 AEAVSKPSNTEGAAEATDVDGPSKEASGGYVPSSPA-VDDYILAYRS 356
>02_05_0763 +
31583449-31583747,31584095-31584230,31584544-31584593,
31585586-31585852,31586481-31586708,31586873-31587011,
31587091-31587161,31587313-31587412,31588201-31588264,
31588346-31588417,31588500-31588720
Length = 548
Score = 31.9 bits (69), Expect = 2.7
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 472 TNTSQTKPPIVSASKPIPNDMVDAANTSKKTKGDYDYDYTEPTLPPSLPNLKIIPFVAAD 531
T TS T P+ A K I + N S+ + DY ++Y T P +P++ I A+
Sbjct: 355 TGTSFTSLPL-DAYKSITMEFDKQINASRASSDDYSFEYCYSTGPLEMPDVPTITLTFAE 413
Query: 532 AVVDDETSKATLTYPILEREDKFPVY 557
+ P +R+ +F V+
Sbjct: 414 ---NKSFQAVNPILPFNDRQGEFAVF 436
>01_06_1156 + 34974727-34974833,34975110-34975217,34978124-34978706
Length = 265
Score = 31.5 bits (68), Expect = 3.6
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 584 ISNKGAEYPSLLPEINLSNSAFGSSSNDLEYTVPTALDDQANVPKVMTAKPSSEPSKYEV 643
+ +E P L I + G+S++ +Y + Q + A+ + K EV
Sbjct: 91 VEQHNSEDPPLFRVIYTNEHTCGTSNSASDYMASSMQIQQIADASLRKAQAAERLRKAEV 150
Query: 644 DTPAISLFSPPAETEGGF--VPKDPEDI 669
+TP + + SPP GG+ K+ +D+
Sbjct: 151 ETPRL-MHSPPPRCSGGYNMAMKEEKDV 177
>12_02_1147 -
26459481-26460124,26460241-26460382,26461658-26461699,
26463377-26463502
Length = 317
Score = 31.1 bits (67), Expect = 4.8
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 611 DLEYTVPTALDDQANVPKVMTAKPSSEPSKYEVDTPAISLFSPPAETEGGFVPKDPEDID 670
D + + TA +D + T P+ ++ E PA S +PPA +EGG +D + +
Sbjct: 192 DTDVEMKTA-EDASKTADADTPAPAPAGTEKEDAKPAESEAAPPAPSEGGEKKEDAKPAE 250
Query: 671 KYYAVYPSPAP-GPSIP 686
A P P PS P
Sbjct: 251 PEAAAAPPSNPTEPSAP 267
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 30.7 bits (66), Expect = 6.3
Identities = 49/233 (21%), Positives = 85/233 (36%), Gaps = 20/233 (8%)
Query: 428 PRIPIVNTDDFEPQTYPPNDIITDRTLGFDESETFTINVTSSLVTNTSQTKPPIVSASKP 487
P PI + P P + I + +L + + + TS + TS P + P
Sbjct: 1643 PTSPIYSATS--PIYSPSSPIYSPTSLSYSPTSP-VYSPTSPVYNPTSSAYSPTSPSYNP 1699
Query: 488 I-PNDMVDAANTS-KKTKGDYDYDYTEPTLPPSLPNLKIIPFVAADAVVDDETSKATLTY 545
P+ + S T Y Y T P+ P+ P+ P + + S + +Y
Sbjct: 1700 TSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSY 1759
Query: 546 PILEREDKFPVYYPTSDTKDTLFATRREDVYPPKYPVFISNKGAEYPSLLPEINLSNSAF 605
P Y PTS + + Y P P + S Y P + S+ ++
Sbjct: 1760 -----SPTSPSYSPTSPS-----YSPTSSAYSPTSPAY-SPTSPGYSPTSPSYSPSSPSY 1808
Query: 606 GSSSNDLEYTVPTALDDQANVPKVMTAKPSSEPSKYEVDTPAISLFSPPAETE 658
SS ++YT P+ ++ + P+ P+ P+ S +SP + E
Sbjct: 1809 NPSS--VKYT-PSHAYSPSSPNYYSSTSPTYSPTSPSYSQPSPS-YSPTSRVE 1857
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.132 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,234,608
Number of Sequences: 37544
Number of extensions: 1297821
Number of successful extensions: 3454
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3448
Number of HSP's gapped (non-prelim): 15
length of query: 1038
length of database: 14,793,348
effective HSP length: 89
effective length of query: 949
effective length of database: 11,451,932
effective search space: 10867883468
effective search space used: 10867883468
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)
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