Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002849-TA|BGIBMGA002849-PA|IPR001007|von Willebrand
factor, type C, IPR009041|Proteinase inhibitor, PMP and SGCI,
IPR009030|Growth factor, receptor
(1038 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 3e-04
SB_47409| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-17) 45 4e-04
SB_58762| Best HMM Match : VWC (HMM E-Value=2.8e-06) 35 0.30
SB_31768| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.68
SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.90
SB_55297| Best HMM Match : Drf_FH1 (HMM E-Value=0.74) 33 1.2
SB_53796| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.6
SB_58864| Best HMM Match : VWC (HMM E-Value=0.0031) 32 2.1
SB_48675| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.1
SB_17477| Best HMM Match : PSI (HMM E-Value=1.7) 32 2.1
SB_45709| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.8
SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.6
SB_42488| Best HMM Match : ig (HMM E-Value=4.2e-06) 31 4.8
SB_37853| Best HMM Match : REJ (HMM E-Value=0.00025) 31 4.8
SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.8
SB_49426| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 6.4
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 6.4
SB_1015| Best HMM Match : Extensin_2 (HMM E-Value=0.11) 31 6.4
SB_57638| Best HMM Match : F5_F8_type_C (HMM E-Value=1.7e-11) 31 6.4
SB_56217| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.4
SB_17743| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.4
SB_55983| Best HMM Match : RhoGEF (HMM E-Value=0.0046) 30 8.4
>SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 875
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 215 DCQVKGAWVPEGQR-VKKSEENSCSQCFCLRGAVRCHTVQCAPPLRGC-TPFVVPGECCP 272
+C +G G+ K E++C QC C++G +C +C+ R C P +PG+CCP
Sbjct: 213 ECSHRGQKYANGKSWTNKPNEDTCFQCRCIKGFAQCTRTECS---RDCPNPEPIPGQCCP 269
Score = 33.9 bits (74), Expect = 0.68
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 74 DCLYGGRWFSDGGEVDTR---EACLQCICSSGALTCRRRACA---PLPDPPPRKC 122
+C + G+ +++G + + C QC C G C R C+ P P+P P +C
Sbjct: 213 ECSHRGQKYANGKSWTNKPNEDTCFQCRCIKGFAQCTRTECSRDCPNPEPIPGQC 267
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
Query: 237 CSQCFCLRGAVRCHTVQCAP--PLRGCTPFVVPGECCPRHYHCEH-GQEH 283
C C C RG C + C P P P ECCP+ C H GQ++
Sbjct: 174 CDVCTCKRGRSDCKQIHCDLFFPCDNLLP-ASPNECCPK-CECSHRGQKY 221
>SB_47409| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-17)
Length = 1571
Score = 44.8 bits (101), Expect = 4e-04
Identities = 52/231 (22%), Positives = 88/231 (38%), Gaps = 11/231 (4%)
Query: 402 NCTAELSSTKIPYNTTLNETNIFDVQPRIPIVNTDDFEPQTYPPNDIITDRTLGFDESET 461
N T+ ++S I NTT ++P I ++N Y ND + +ET
Sbjct: 1300 NATSSVTSQPIVMNTTKQPVLNATLEPTISLLNRTAVPTTQYKGNDTVQPTQSNLTVTET 1359
Query: 462 FTINVTSSLVTNTSQTKPPIVSASKPIPNDMVDAANTSKKTKGDYDYDYTEPTLPPSLPN 521
FT ++ S T S T P +A+ +P M T+ T ++ T P ++ N
Sbjct: 1360 FTGSLRSP-STKISSTTSPTQAANVSVP--MTKETRTTTATTKSLAFNKTRTVTPTAVGN 1416
Query: 522 LKIIPFVAADAVVDDETSKATLTYPILEREDKFPVYYPTSDTKDTLFATRREDVYPPKYP 581
I A + ++T+ + + P E FP +T D R D P
Sbjct: 1417 ATI---KATASTPTNDTTVSPTSEPEAMTEPSFPTSPTRGNTTDEYL--RAGDNTSTTAP 1471
Query: 582 VFISNKGAEYPSLLPEINLSNSAFGSS-SNDLEYTVPTALDDQANVPKVMT 631
F + ++ P+ N+S + S+ + E PT + P +T
Sbjct: 1472 PFTAPYSSQGPT--SAHNISTAVLESNVTTPRETGKPTQTTRRTATPTTLT 1520
>SB_58762| Best HMM Match : VWC (HMM E-Value=2.8e-06)
Length = 218
Score = 35.1 bits (77), Expect = 0.30
Identities = 32/130 (24%), Positives = 47/130 (36%), Gaps = 13/130 (10%)
Query: 145 EGGTVYAAGSALR-PTAACESCFCLQAEXXXXXXXXXXXXXXXXXXXASGACCPQRYYCQ 203
EG T+Y L AAC+ C C + GAC ++Y +
Sbjct: 86 EGDTMYVPNEWLDVKDAACQKCECNSGKASSCSIGYHCDALL------DGAC--EKYVLE 137
Query: 204 HAYSPHKNSTHDCQVKGAWVPEGQRVKKSEENSCSQCFCLRGAVRCHTVQCAPPLRGCTP 263
T C + EG ++ C +C C RG +C V C+ P+
Sbjct: 138 PKQCC---PTCACVHNNTEMAEGSTWAFRKDAKCHECTCSRGNGKCSFVGCSCPVGHHQS 194
Query: 264 FVVP-GECCP 272
+P G+CCP
Sbjct: 195 DSIPEGKCCP 204
>SB_31768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 33.9 bits (74), Expect = 0.68
Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 9/77 (11%)
Query: 202 CQHAYSPHKNSTHDCQVKGAWVPEGQRV------KKSEENSCSQCFCLRGAVRCHTVQCA 255
C+ P K D ++G+ V G+R S + C+ C C V C V C
Sbjct: 313 CRQKLPPQKT---DFTIEGSCVENGERYFNGEVWSPSHDPICTTCSCKDATVSCFPVVCL 369
Query: 256 PPLRGCTPFVVPGECCP 272
P ++P CCP
Sbjct: 370 PLNCSEQLIMMPERCCP 386
>SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1229
Score = 33.5 bits (73), Expect = 0.90
Identities = 34/158 (21%), Positives = 58/158 (36%), Gaps = 9/158 (5%)
Query: 393 VKIMVNGTINCTAELSSTKIPYNTTL------NETNIFDVQPRIPIVNTDDFEPQTYPPN 446
V I + N T L ST +PYNTTL T + P + N +
Sbjct: 690 VTINMTREANSTMILPSTSVPYNTTLIPAPNATSTAATTMSPSY-VANMTTLDSSVSLTR 748
Query: 447 DIITDRTLGFDESETFTINVTSSLVTNTSQTKPPIVSASKPIPNDMVDAANTSKKTKGDY 506
+++ + + N T NT++ ++ S ND + +TS +
Sbjct: 749 SLLSTTLIPSISTSILPYNTTVIATPNTTRIATSVILLSS--LNDTIRTRSTSVVFETTM 806
Query: 507 DYDYTEPTLPPSLPNLKIIPFVAADAVVDDETSKATLT 544
PP + + + ++A +VV D T+ T T
Sbjct: 807 KRTQITTGYPPLMTSSAVASSISATSVVVDSTTPNTTT 844
Score = 30.3 bits (65), Expect = 8.4
Identities = 41/172 (23%), Positives = 67/172 (38%), Gaps = 20/172 (11%)
Query: 393 VKIMVNGTINCTAELSSTKIPYNTTLNETNIFDVQPRIPIVNTDDFEPQTYPPNDIITDR 452
V I + N T L ST +PYNTTL IP N T P+ +
Sbjct: 489 VTINMTREANSTMILPSTSVPYNTTL-----------IPAPNATSTAATTMSPSYVANMT 537
Query: 453 TLGFDESETFTINVTSSLVTNTSQTKPPIVSASKPIPNDMVDAANTSKKTKGDYDYDYTE 512
TL D S +++T SL++ T P I ++ P ++ NT++
Sbjct: 538 TL--DSS----VSLTRSLLSTT--LIPSISTSILPYNTTVIATPNTTRLVTSTISSSTVN 589
Query: 513 PTLPPSLPNLK-IIPFVAADAVVDDETSKATLTYPILEREDKFPVYYPTSDT 563
+ + P+++ I A ++ + TS T+ R +PT+ T
Sbjct: 590 VSAISTTPSIESTIMASVASSIQLNITSNTTMAVNDTLRTTSTSAVFPTTIT 641
>SB_55297| Best HMM Match : Drf_FH1 (HMM E-Value=0.74)
Length = 808
Score = 33.1 bits (72), Expect = 1.2
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Query: 416 TTLNETNIFDVQPRI-PIVNTDDFEPQTYPPNDIITDRTLGFDESETFTINVTSSLVTNT 474
T L +N+ +P + P N +P P ++++ + S T +N
Sbjct: 355 TALPASNMVQSKPTVLPASNMVHSKPTVLPASNMVHSKPKVLPASNMVHSKPTVLPASNM 414
Query: 475 SQTKPPIVSASKPIPNDMVDAANTSKKTKGDYDYDYTEPTLPPSLPNLKI 524
Q+KP ++ +++PI + D + K G D E T P S NLK+
Sbjct: 415 VQSKPTVLPSTRPIATNQADLLLSPK--SGFQDVFAVETTRPGS-SNLKL 461
>SB_53796| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 32.7 bits (71), Expect = 1.6
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Query: 235 NSCSQCFCLRGAVRCHTVQCAPPLRGCTPFV-VPGECCP 272
N C+ C C+ G C C P C V + G+CCP
Sbjct: 269 NDCTVCTCILGRPECVATVCRHP--NCVDAVRIKGQCCP 305
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
Query: 87 EVDTREACLQCICSSGA-LTCRRRACAPLPDPPPRKCHAVYRKGSCCP 133
E+ ++ C CIC S L C ++ C L P V+ KG CCP
Sbjct: 436 EMWQQDDCTACICGSDRKLQCTKKTCPKLLCDNP-----VHNKGRCCP 478
>SB_58864| Best HMM Match : VWC (HMM E-Value=0.0031)
Length = 166
Score = 32.3 bits (70), Expect = 2.1
Identities = 20/63 (31%), Positives = 23/63 (36%), Gaps = 4/63 (6%)
Query: 213 THDCQVKGAWVPEGQRVKKSEENSCSQCFCLRGAVRCHTVQCAPPLRGCTPF---VVPGE 269
T C G G K ++ C C C R RC V C P G P P +
Sbjct: 55 TPPCVHNGVKKENGASWVKHNDSKCYHCACDRDVARCDLVNCYCP-EGEEPSPDGPPPDK 113
Query: 270 CCP 272
CCP
Sbjct: 114 CCP 116
>SB_48675| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1329
Score = 32.3 bits (70), Expect = 2.1
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 446 NDIITDRTLGF-DESETFTINVTSSLVTNTSQTKPPIVSASKPIPNDMVDAANTSKKTKG 504
N + RT ++ +T + S+++ T T P +S IP D+VD NTS
Sbjct: 204 NQLCPFRTTSILEKGKTLSDAFNKSIISPTKMTDPASISDQSNIP-DIVDEINTSSSKPA 262
Query: 505 DYDY 508
+Y Y
Sbjct: 263 EYYY 266
>SB_17477| Best HMM Match : PSI (HMM E-Value=1.7)
Length = 206
Score = 32.3 bits (70), Expect = 2.1
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 235 NSCSQCFCLRGAVRCHTVQ---CAPPLRGCTPFVVPGECCP 272
N C++C + G RC T+ C + GCT V C P
Sbjct: 160 NGCARCVTIYGCARCVTMNGCLCCVTMNGCTCCVTINGCAP 200
>SB_45709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1112
Score = 31.9 bits (69), Expect = 2.8
Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 8/63 (12%)
Query: 80 RWFSDGGE--VDTRE--ACLQCICSSGALTCRRRACAPLPDPPPRKCHAVYRKGSCCPEL 135
RW DG +D + C CSS TC + C PL P+KC G E
Sbjct: 487 RWICDGERDCLDGSDEAGCGTIGCSSDEFTCTNQKCIPL----PQKCDGTDNCGDGSDEK 542
Query: 136 QCP 138
CP
Sbjct: 543 MCP 545
>SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1887
Score = 31.5 bits (68), Expect = 3.6
Identities = 34/130 (26%), Positives = 51/130 (39%), Gaps = 9/130 (6%)
Query: 440 PQTYPPNDIITDRTLGFDESE-TFTINVTSSLVTNTSQTKPPIV----SASKPIP---ND 491
P T P + D+T ++ T T T+ T S+TKPP + +A+ +P
Sbjct: 1407 PSTTAPPTTVEDKTREEATTKPTTTTRKTTIPTTTASETKPPTIRKTTTATTTVPATKPP 1466
Query: 492 MVDAANTSKKTKGDYDYDYTEPTLPP-SLPNLKIIPFVAADAVVDDETSKATLTYPILER 550
T+ T+G T PP ++ NL+ I D+ ETS+ P
Sbjct: 1467 TTRKTTTATTTQGRTTRKPTTTAEPPTTVDNLRRISTKIKDSTSRPETSQTQTEAPGHST 1526
Query: 551 EDKFPVYYPT 560
FP Y T
Sbjct: 1527 AVYFPTTYET 1536
>SB_42488| Best HMM Match : ig (HMM E-Value=4.2e-06)
Length = 464
Score = 31.1 bits (67), Expect = 4.8
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 600 LSNSAFGSSSNDLEYTVPTALD-DQANVPKVMTAKPSSEPSKYEV 643
+SN+ FG++ VP A + D+AN PKV+ KP PS + V
Sbjct: 332 ISNNPFGTARKYFVVNVPHAPEIDRANTPKVILRKPG--PSTFTV 374
>SB_37853| Best HMM Match : REJ (HMM E-Value=0.00025)
Length = 2182
Score = 31.1 bits (67), Expect = 4.8
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 518 SLPNLKIIPFVAADAVVDDETSKATLTYPILEREDKFPVYYPTSDTKDTLFATRREDVYP 577
S+P L++ AA A T AT T +L + +DT T+ + E V P
Sbjct: 1899 SVP-LEVQKEAAAAAEPTPTTEAATTTGKVLSSTEVM------TDTTPTIVGSTTETVRP 1951
Query: 578 PKYPVFISNK-GAEYPSLLPEINLSNSAFGSSSNDLEYTV 616
P+ P + K A S++ L+ SA G++ DL+ T+
Sbjct: 1952 PEKPARVQVKFPAPEGSIIVSFTLAPSANGTTVQDLKVTL 1991
>SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 31.1 bits (67), Expect = 4.8
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 74 DCLYGGRWFSDGGEVDTREACLQCICSSGALTCRRRACAP 113
+C G + DG E+ T C C+C+ G C C P
Sbjct: 245 NCELEGEQYKDGAEIPTD--CNSCVCACGRWVCTALDCNP 282
>SB_49426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 447
Score = 30.7 bits (66), Expect = 6.4
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 13/128 (10%)
Query: 513 PTLPPSLPNLKIIPFVAAD-AVVDDETSKATLTYPILEREDKFPVYYPTSDTKDTLFATR 571
P++PP P I F+A D A V +ET+ A + +FP P D + R
Sbjct: 323 PSMPPRCPYC-IATFIAVDDAAVREETAPAMIV--------RFPASCPAPPLADHHY--R 371
Query: 572 REDVYPPKYPVFISNKGAEYP-SLLPEINLSNSAFGSSSNDLEYTVPTALDDQANVPKVM 630
+ + PP+ PV +P S L N++ ++D E DD P +
Sbjct: 372 QLRLPPPRLPVDCQRLALRFPESYLSPENIAVIPEARPTSDEELDRLNFPDDPVRSPLPV 431
Query: 631 TAKPSSEP 638
+ P+ P
Sbjct: 432 SPDPNDFP 439
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 30.7 bits (66), Expect = 6.4
Identities = 29/126 (23%), Positives = 44/126 (34%), Gaps = 1/126 (0%)
Query: 400 TINCTAELSSTKIPYNTTLNETNIFDVQPRIPIVNTDDFEPQT-YPPNDIITDRTLGFDE 458
T T + STK P T T + + T P T P +T T +
Sbjct: 222 TQQTTTTIPSTKQPTTTQQTTTTLPSTKQPTTTQQTTTTLPSTKQPTTPQLTTTTFPSTK 281
Query: 459 SETFTINVTSSLVTNTSQTKPPIVSASKPIPNDMVDAANTSKKTKGDYDYDYTEPTLPPS 518
T T T++L + T +A+ P P+ + + + + EPT P
Sbjct: 282 QPTTTQQTTATLPSTKQPTTTQQTTATLPTPSTKPTTVSPTTRQPPPEPTEPLEPTEPTE 341
Query: 519 LPNLKI 524
P L I
Sbjct: 342 PPVLGI 347
>SB_1015| Best HMM Match : Extensin_2 (HMM E-Value=0.11)
Length = 828
Score = 30.7 bits (66), Expect = 6.4
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 627 PKVMTAKPSSEPSKYEVDTPAISLFSPPAETEGGFVPKDPED--IDKYYAVYPSPAPGPS 684
P ++ P+ EP +D+ IS + PP PK+P + A P AP P+
Sbjct: 503 PPPVSISPA-EPKVKFLDSVKISSYKPPEPNP--VAPKEPPKPILKPTKAPEPKLAPAPA 559
Query: 685 IPHLTTSMQLDVAKECITSDGRRVKDGHKTS 715
P T ++ AK +K HK S
Sbjct: 560 TPAKTEQLKKPRAKPTFERREADIKSQHKPS 590
>SB_57638| Best HMM Match : F5_F8_type_C (HMM E-Value=1.7e-11)
Length = 502
Score = 30.7 bits (66), Expect = 6.4
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 111 CAPLPDPPPRKCHAVYRKGSCCPELQCPV-FPACVEGGTVYAAGSALRPTAACE 163
C PP KC + C ++CP P C + G +Y +R +ACE
Sbjct: 386 CGSQKCPPYAKCKVGSKAVGCSCAMECPEGVPVCADDGLIYGNLCKMR-QSACE 438
>SB_56217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 30.3 bits (65), Expect = 8.4
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 24 GGTVRDVVPGGDCRAR---KPPRRVLRS-FVIMQISDVDLWHVLRNEHGSSLPADCLYGG 79
GG R + +C A + PR S +++MQ D+D WH +++E C
Sbjct: 21 GGYYRPLHRSVECVAPADGRGPRSATTSIYLVMQHGDIDPWHRMKSEETFFYHKGCSLRL 80
Query: 80 RWFSDGGEVDTR 91
+D G++D+R
Sbjct: 81 YILTDDGKLDSR 92
>SB_17743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 30.3 bits (65), Expect = 8.4
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Query: 235 NSCSQCFCLRGAVRCHTVQ---CAPPLRGCTPFVV 266
N C++C + G RC T+ C + GC P V+
Sbjct: 223 NGCARCVTMNGCPRCVTMNGCTCCVTINGCAPCVM 257
>SB_55983| Best HMM Match : RhoGEF (HMM E-Value=0.0046)
Length = 357
Score = 30.3 bits (65), Expect = 8.4
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 9/67 (13%)
Query: 700 CITSDGR---RVKDGHKTSVWCSNCACQDRELRCIPRDCSVPS---GCNRLPITSEAKDL 753
C + D R R +DGH TS + C R+LRC RD S C + D+
Sbjct: 290 CTSRDVRCTSRDRDGHFTS---RDVRCNSRDLRCTSRDLRCTSRDVRCTSRDVRCTLCDV 346
Query: 754 CCGDLVC 760
C ++C
Sbjct: 347 RCTSVIC 353
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.132 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,716,953
Number of Sequences: 59808
Number of extensions: 1456422
Number of successful extensions: 4087
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 4058
Number of HSP's gapped (non-prelim): 54
length of query: 1038
length of database: 16,821,457
effective HSP length: 89
effective length of query: 949
effective length of database: 11,498,545
effective search space: 10912119205
effective search space used: 10912119205
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)
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