SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002848-TA|BGIBMGA002848-PA|undefined
         (95 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB7D46 Cluster: PREDICTED: similar to CG17127-PA...   135   1e-31
UniRef50_Q9VKQ2 Cluster: CG17127-PA; n=6; Endopterygota|Rep: CG1...   132   2e-30
UniRef50_A7HWL1 Cluster: Response regulator receiver protein; n=...    35   0.27 
UniRef50_Q26H34 Cluster: Putative uncharacterized protein; n=1; ...    33   1.4  
UniRef50_A0KN00 Cluster: Outer membrane lipoprotein LolB; n=2; A...    32   1.9  
UniRef50_Q4T928 Cluster: Chromosome undetermined SCAF7646, whole...    31   3.3  
UniRef50_A6LEW4 Cluster: Hydrolase, haloacid dehalogenase-like f...    31   3.3  
UniRef50_Q9SK25 Cluster: Putative uncharacterized protein At2g09...    31   4.4  
UniRef50_Q06706 Cluster: Elongator complex protein 1; n=10; Sacc...    31   4.4  
UniRef50_UPI000049938B Cluster: hypothetical protein 50.t00042; ...    31   5.8  
UniRef50_Q5B5F7 Cluster: Putative uncharacterized protein; n=1; ...    31   5.8  
UniRef50_Q23K17 Cluster: Putative uncharacterized protein; n=1; ...    30   7.7  
UniRef50_Q09924 Cluster: Probable translation initiation factor ...    30   7.7  

>UniRef50_UPI0000DB7D46 Cluster: PREDICTED: similar to CG17127-PA;
          n=1; Apis mellifera|Rep: PREDICTED: similar to
          CG17127-PA - Apis mellifera
          Length = 80

 Score =  135 bits (327), Expect = 1e-31
 Identities = 62/77 (80%), Positives = 71/77 (92%)

Query: 19 PQREGAVFSNEAIKQAQNTQLIPKDAVIQKVQEGIELAAYQSIPGNQRINLYEILGDQVP 78
          PQ++G +FSNEAIKQAQNT LIPKDA IQKVQEGIELAAY+SIPG Q+INL+EILG  VP
Sbjct: 4  PQKDGQIFSNEAIKQAQNTYLIPKDATIQKVQEGIELAAYESIPGEQKINLFEILGAHVP 63

Query: 79 SEVINNLQSQIDQVGRN 95
          SEV+NNLQ+QIDQ+GRN
Sbjct: 64 SEVVNNLQAQIDQIGRN 80


>UniRef50_Q9VKQ2 Cluster: CG17127-PA; n=6; Endopterygota|Rep:
          CG17127-PA - Drosophila melanogaster (Fruit fly)
          Length = 98

 Score =  132 bits (318), Expect = 2e-30
 Identities = 63/78 (80%), Positives = 70/78 (89%), Gaps = 1/78 (1%)

Query: 19 PQ-REGAVFSNEAIKQAQNTQLIPKDAVIQKVQEGIELAAYQSIPGNQRINLYEILGDQV 77
          PQ REGA ++NEAI+QAQ T LIPKDA IQ VQEGIEL AY+ IPGNQRINL+EILGDQV
Sbjct: 21 PQNREGAAYTNEAIRQAQQTLLIPKDAQIQNVQEGIELGAYEQIPGNQRINLFEILGDQV 80

Query: 78 PSEVINNLQSQIDQVGRN 95
          PSEVINNLQSQ+DQ+GRN
Sbjct: 81 PSEVINNLQSQVDQIGRN 98


>UniRef50_A7HWL1 Cluster: Response regulator receiver protein;
          n=1; Parvibaculum lavamentivorans DS-1|Rep: Response
          regulator receiver protein - Parvibaculum
          lavamentivorans DS-1
          Length = 153

 Score = 35.1 bits (77), Expect = 0.27
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 23 GAVFSNEAIKQAQNT--QLIPKDAVIQKVQEGIELAAYQSIPGNQRINLYEILGDQVPSE 80
          GA  S EA+  A  T   LI  D  ++    G+ + A + +PG Q   L+ + GD  P+ 
Sbjct: 30 GASGSEEALAMAAGTAPDLIMIDGRLEMPSGGLLVEALRRLPGGQDFCLFHVTGDAAPAS 89

Query: 81 VINNLQSQID 90
          V   +++  D
Sbjct: 90 VRRAIEAGAD 99


>UniRef50_Q26H34 Cluster: Putative uncharacterized protein; n=1;
           Flavobacteria bacterium BBFL7|Rep: Putative
           uncharacterized protein - Flavobacteria bacterium BBFL7
          Length = 345

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 5/56 (8%)

Query: 33  QAQNTQLIPKDAVIQKVQEGIELAAYQSIPGNQRINLYEILGDQVPSEVINNLQSQ 88
           ++ + QLI  D++I   Q  I+ +  Q   G    NLY  LGDQ PSE + NL  Q
Sbjct: 223 KSMSYQLIELDSLIAAYQTAIKSSDVQ---GGNGTNLY--LGDQKPSEALKNLFDQ 273


>UniRef50_A0KN00 Cluster: Outer membrane lipoprotein LolB; n=2;
          Aeromonas|Rep: Outer membrane lipoprotein LolB -
          Aeromonas hydrophila subsp. hydrophila (strain ATCC
          7966 / NCIB 9240)
          Length = 194

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 7  CLLXXXXXXXXXPQREGAVFSNEA--IKQAQNTQLIPKDAVIQKVQEGIELAAYQSIPGN 64
          CLL         PQR+   +  E   ++Q  + QL  K A+I   Q+G     +Q    +
Sbjct: 12 CLLLLAGCATTQPQRDQVNWQQERTRLEQLSHWQLSGKMAIITAQQKGSARVNWQQDGDD 71

Query: 65 QRINLYEILGDQV 77
           R+NL  ++G  +
Sbjct: 72 YRLNLTSLIGTHI 84


>UniRef50_Q4T928 Cluster: Chromosome undetermined SCAF7646, whole
            genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
            Chromosome undetermined SCAF7646, whole genome shotgun
            sequence - Tetraodon nigroviridis (Green puffer)
          Length = 4089

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 33   QAQNTQLIPKDAVIQKVQEGIELAAYQSIPGNQRINLYEILGDQVPSEVINNLQSQIDQV 92
            +A  T+L  K+A+IQ++QE +   + +++  N+++ + E     +  E + N+Q   D+V
Sbjct: 3190 EAMQTELGKKEALIQELQEVVSRHSQETVSLNEKVRILED-DKSLLQEELENVQETSDKV 3248


>UniRef50_A6LEW4 Cluster: Hydrolase, haloacid dehalogenase-like
           family; n=1; Parabacteroides distasonis ATCC 8503|Rep:
           Hydrolase, haloacid dehalogenase-like family -
           Parabacteroides distasonis (strain ATCC 8503 / DSM 20701
           / NCTC11152)
          Length = 230

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)

Query: 27  SNEAIKQAQNTQLIPKDAVIQKVQEGIELAAYQSIPGNQRINLYEILGDQVPSEVINNLQ 86
           SN  +       ++ +DA IQK  +GI   A ++   N R +   ++GD   +++I   Q
Sbjct: 139 SNAGLAPYFERMILSEDANIQKPHKGIFDFALKNT--NSRRSESLMIGDSWEADIIGAYQ 196

Query: 87  SQIDQVGRN 95
           S+IDQ+  N
Sbjct: 197 SKIDQIWLN 205


>UniRef50_Q9SK25 Cluster: Putative uncharacterized protein
           At2g09910; n=2; Arabidopsis thaliana|Rep: Putative
           uncharacterized protein At2g09910 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 985

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 33  QAQNTQLIPKDAVIQKVQEGIELAAYQSIPGNQRINLYEILGDQVPSEVINNLQS 87
           Q+Q+ Q++  +  IQ V     +A Y ++P  + +N   ++ DQ   E +  L++
Sbjct: 378 QSQSVQVVEPE--IQNVTSDRSIAVYAAVPAGEEVNTGLVIVDQDKDETVEELET 430


>UniRef50_Q06706 Cluster: Elongator complex protein 1; n=10;
           Saccharomycetales|Rep: Elongator complex protein 1 -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 1349

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 4/59 (6%)

Query: 39  LIPKDAVIQKVQEGIELAAYQS---IPGNQRINLYEILGDQVPSEVINNLQSQIDQVGR 94
           + P+  V+ +V++ I    Y+    +    RINL +IL D  P   I NL+  I+Q+GR
Sbjct: 739 IYPRIMVLAEVRKNIMAKRYKEAFIVCRTHRINL-DILHDYAPELFIENLEVFINQIGR 796


>UniRef50_UPI000049938B Cluster: hypothetical protein 50.t00042;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 50.t00042 - Entamoeba histolytica HM-1:IMSS
          Length = 1098

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 12/63 (19%), Positives = 33/63 (52%)

Query: 25  VFSNEAIKQAQNTQLIPKDAVIQKVQEGIELAAYQSIPGNQRINLYEILGDQVPSEVINN 84
           + + + + +  N +    D +I++++ GI+L        N   N++E L  ++  +++N 
Sbjct: 931 ITTEQQLNKTGNEKQSKIDKIIEQIKHGIKLFGTDVSKWNINFNIFEPLSSKMIQDIVNK 990

Query: 85  LQS 87
           ++S
Sbjct: 991 IES 993


>UniRef50_Q5B5F7 Cluster: Putative uncharacterized protein; n=1;
           Emericella nidulans|Rep: Putative uncharacterized
           protein - Emericella nidulans (Aspergillus nidulans)
          Length = 2418

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 16/62 (25%), Positives = 30/62 (48%)

Query: 31  IKQAQNTQLIPKDAVIQKVQEGIELAAYQSIPGNQRINLYEILGDQVPSEVINNLQSQID 90
           ++Q +    I KD +IQ +QE IE    +S+ G Q   L + + + V   +      + D
Sbjct: 610 VQQFEQPPSITKDEIIQVIQESIESVEPRSLDGEQLAALRDEILNAVTDSIATQTTMKKD 669

Query: 91  QV 92
           ++
Sbjct: 670 EI 671


>UniRef50_Q23K17 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 313

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 3/72 (4%)

Query: 27  SNEAIKQAQNTQLIPKDAVIQKVQE--GIELAAYQSIPGNQRI-NLYEILGDQVPSEVIN 83
           +N  +K  QN  +IP   + +KV +   I+L A  +     ++ N ++I+G Q    VI+
Sbjct: 100 NNMNLKNQQNVIVIPDKNIKEKVNDKIQIDLVAQNTQQNISKLGNSFKIVGKQQNVIVID 159

Query: 84  NLQSQIDQVGRN 95
            ++ ++D   +N
Sbjct: 160 QIEQKLDSYSQN 171


>UniRef50_Q09924 Cluster: Probable translation initiation factor
           eIF-2B subunit delta; n=1; Schizosaccharomyces
           pombe|Rep: Probable translation initiation factor eIF-2B
           subunit delta - Schizosaccharomyces pombe (Fission
           yeast)
          Length = 467

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 14/47 (29%), Positives = 29/47 (61%)

Query: 20  QREGAVFSNEAIKQAQNTQLIPKDAVIQKVQEGIELAAYQSIPGNQR 66
           +++ ++FS+   ++ + T+ IPKD     ++ G++LA Y+    NQR
Sbjct: 117 EKQVSIFSHLDWRRRRTTENIPKDIHPAVIRLGLKLANYKIFGSNQR 163


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.315    0.133    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,868,561
Number of Sequences: 1657284
Number of extensions: 2693816
Number of successful extensions: 7261
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 7254
Number of HSP's gapped (non-prelim): 15
length of query: 95
length of database: 575,637,011
effective HSP length: 73
effective length of query: 22
effective length of database: 454,655,279
effective search space: 10002416138
effective search space used: 10002416138
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)

- SilkBase 1999-2023 -