GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002848-TA|BGIBMGA002848-PA|undefined
         (95 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    21   2.6  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   4.5  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    20   6.0  

>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 53  IELAAYQSIPGNQRINLYEILGDQV-PSEVI 82
           IEL   + +PG   I   E+  D + P +VI
Sbjct: 131 IELEIRRDLPGKSTITTVEVKRDIINPEDVI 161


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 10/21 (47%), Positives = 10/21 (47%)

Query: 63  GNQRINLYEILGDQVPSEVIN 83
           GN R N Y     QVP  V N
Sbjct: 131 GNSRANTYNFDYPQVPYTVKN 151


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 19.8 bits (39), Expect = 6.0
 Identities = 6/20 (30%), Positives = 14/20 (70%)

Query: 73  LGDQVPSEVINNLQSQIDQV 92
           +G+ +P E+I NL++  + +
Sbjct: 331 IGETMPMELIENLRNHPEYI 350


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.315    0.133    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,941
Number of Sequences: 429
Number of extensions: 694
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 95
length of database: 140,377
effective HSP length: 49
effective length of query: 46
effective length of database: 119,356
effective search space:  5490376
effective search space used:  5490376
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.2 bits)
S2: 38 (19.4 bits)