Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002846-TA|BGIBMGA002846-PA|undefined
(353 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53149-6|AAZ82856.1| 284|Caenorhabditis elegans Hypothetical pr... 180 1e-45
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 29 5.0
U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak k... 29 5.0
U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak k... 29 5.0
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 29 5.0
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 29 5.0
AF047661-6|AAC04438.2| 577|Caenorhabditis elegans Hypothetical ... 29 5.0
AF040648-6|AAO91708.1| 908|Caenorhabditis elegans Lethal protei... 29 5.0
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 29 5.0
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 29 5.0
AC024808-2|AAK29926.1| 229|Caenorhabditis elegans Hypothetical ... 29 5.0
Z73103-2|CAA97425.2| 400|Caenorhabditis elegans Hypothetical pr... 29 6.6
>U53149-6|AAZ82856.1| 284|Caenorhabditis elegans Hypothetical
protein C24B5.4 protein.
Length = 284
Score = 180 bits (438), Expect = 1e-45
Identities = 98/291 (33%), Positives = 150/291 (51%), Gaps = 13/291 (4%)
Query: 53 VLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAKLVEIGGPPYLVPQVKRDKIY 112
V L +NF+ VEV++ D PDL++PP+ KS G + ++ E+GGP L P D +
Sbjct: 1 VFQTSLLSNFENVEVNIVDCPDLSKPPFNQKSSGFGHNLRIAEVGGPGNLYPGFHIDHQF 60
Query: 113 DLAKLLEHLNRDPAFLAGAGAGPWPYLGVNCEGIVNLSVRNGTVDQGTRIVSVHPVGAPK 172
D+ K+ + A + G GAGPWP +G NCE + +++++ G V GTRI ++
Sbjct: 61 DIPKIGKVCEHPEAAVFGPGAGPWPIVGQNCEMVADVNLKTGEV--GTRIAEIN----SN 114
Query: 173 GSSGYLQQQLPNDETRTALLGNYLLTEG-KPGKVIKVVAKNRTGKSNFITSIRETLKTHY 231
Y+Q+ + DE + +L+ N L++ K V+ A R G+ N IR+ L+ H+
Sbjct: 115 SDKRYVQRII--DEPKFSLMANLALSDADKSSTVVHFKASVRKGEKNLTNCIRDGLQEHF 172
Query: 232 GDKVVGLGGAFVLRAGRGYFHVMPDFSRAPLCSDAAVDSWLHYFELDAPXXXXXXXXXXX 291
G K+V L G F+++ G+ HVMPDF P ++A VD WL+YFE+ AP
Sbjct: 173 GKKIVSLAGQFIIQTGKARLHVMPDFPGCPFENNAEVDKWLNYFEMSAPLICATVMHSYD 232
Query: 292 XXXXXRVQXXXXXXXXXXXXXXXXXXXXDTTPEDVHYEGYFTVASSLIRVD 342
R++ D TPE V YEG+F AS + R+D
Sbjct: 233 PGHNLRLE----HTHCYSDHGDAGHYHYDVTPETVSYEGWFAPASKIYRID 279
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 14 SVQMATLVTSTARMTSIDYTKVTIKEKELYTPPLDEVACVLSNGLTTNFKFVEV 67
+++M T+V S A + + + +K ++P DE+A + S+G+ T F+ E+
Sbjct: 509 TIKMWTIVDSQAETVEVSHEALDVK----FSPAGDEIAVLTSDGVITFFEAKEM 558
>U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform b protein.
Length = 422
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 46 PLDEVACVLSNGLTTNFKFVEVSVAD 71
P++E AC +S+G+TTN ++ V D
Sbjct: 211 PINEPACSISSGMTTNPDWITVDTED 236
>U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform a protein.
Length = 516
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 46 PLDEVACVLSNGLTTNFKFVEVSVAD 71
P++E AC +S+G+TTN ++ V D
Sbjct: 305 PINEPACSISSGMTTNPDWITVDTED 330
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 11 YAASVQMATLVTSTARMTSID-YTKVTIKEKELYTPPLDEVACVLSNGLTTNFKFVEV 67
Y+ ++ T R+ +ID KV + +EL E +C+ S G+ TN + +V
Sbjct: 391 YSVALSQMNAPYYTVRIVAIDDQNKVVARTEELTVGEAAETSCIGSAGVPTNIRSADV 448
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 11 YAASVQMATLVTSTARMTSID-YTKVTIKEKELYTPPLDEVACVLSNGLTTNFKFVEV 67
Y+ ++ T R+ +ID KV + +EL E +C+ S G+ TN + +V
Sbjct: 391 YSVALSQMNAPYYTVRIVAIDDQNKVVARTEELTVGEAAETSCIGSAGVPTNIRSADV 448
>AF047661-6|AAC04438.2| 577|Caenorhabditis elegans Hypothetical
protein M70.5 protein.
Length = 577
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 37 IKEKELYT-PPLDEVACVLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAKLVE 95
+K K+L PP+D L+ L F + +DS +T PY+ + G G++K+V+
Sbjct: 226 LKMKKLSKMPPVDSAKFDLTYPLGVTFD----TKSDSWYITNQPYFCEGDGFKGESKIVK 281
Query: 96 I 96
I
Sbjct: 282 I 282
>AF040648-6|AAO91708.1| 908|Caenorhabditis elegans Lethal protein
805, isoform d protein.
Length = 908
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 11 YAASVQMATLVTSTARMTSID-YTKVTIKEKELYTPPLDEVACVLSNGLTTNFKFVEV 67
Y+ ++ T R+ +ID KV + +EL E +C+ S G+ TN + +V
Sbjct: 391 YSVALSQMNAPYYTVRIVAIDDQNKVVARTEELTVGEAAETSCIGSAGVPTNIRSADV 448
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 11 YAASVQMATLVTSTARMTSID-YTKVTIKEKELYTPPLDEVACVLSNGLTTNFKFVEV 67
Y+ ++ T R+ +ID KV + +EL E +C+ S G+ TN + +V
Sbjct: 391 YSVALSQMNAPYYTVRIVAIDDQNKVVARTEELTVGEAAETSCIGSAGVPTNIRSADV 448
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 11 YAASVQMATLVTSTARMTSID-YTKVTIKEKELYTPPLDEVACVLSNGLTTNFKFVEV 67
Y+ ++ T R+ +ID KV + +EL E +C+ S G+ TN + +V
Sbjct: 391 YSVALSQMNAPYYTVRIVAIDDQNKVVARTEELTVGEAAETSCIGSAGVPTNIRSADV 448
>AC024808-2|AAK29926.1| 229|Caenorhabditis elegans Hypothetical
protein Y53G8AM.5 protein.
Length = 229
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/63 (25%), Positives = 28/63 (44%)
Query: 195 YLLTEGKPGKVIKVVAKNRTGKSNFITSIRETLKTHYGDKVVGLGGAFVLRAGRGYFHVM 254
+LL P VI+ +A T KSN +I+ + + +G+ A R G +F +
Sbjct: 19 FLLPYTLPSDVIQTIATKETRKSNTCQNIQLNYCQNQFNTFLGIDDAITWRDGSSFFEAV 78
Query: 255 PDF 257
+
Sbjct: 79 ESY 81
>Z73103-2|CAA97425.2| 400|Caenorhabditis elegans Hypothetical
protein C08F8.3 protein.
Length = 400
Score = 28.7 bits (61), Expect = 6.6
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 163 VSVHPVGAPKGSSGYLQQQLPNDETRTALLGNYLLTEGKPGKVIKVVAKNRTGKSN 218
VS PV AP S QQQ P +TA +GN+L + G ++ V + T + +
Sbjct: 308 VSKAPVVAPS-SQLQQQQQQPCSSNQTARIGNFLERDQVRGNLLGVPLSSSTPRGS 362
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.137 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,210,403
Number of Sequences: 27539
Number of extensions: 344846
Number of successful extensions: 697
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 691
Number of HSP's gapped (non-prelim): 14
length of query: 353
length of database: 12,573,161
effective HSP length: 82
effective length of query: 271
effective length of database: 10,314,963
effective search space: 2795354973
effective search space used: 2795354973
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)
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