Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002844-TA|BGIBMGA002844-PA|IPR000976|Wilm's tumour
protein, IPR000437|Prokaryotic membrane lipoprotein lipid attachment
site
(753 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36184| Best HMM Match : UBA (HMM E-Value=2.4e-09) 57 6e-08
SB_19851| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.9
SB_3153| Best HMM Match : PAN (HMM E-Value=0.0028) 31 2.6
SB_29| Best HMM Match : DUF1635 (HMM E-Value=1.9) 31 2.6
SB_35575| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.4
SB_12629| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.4
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.4
SB_30862| Best HMM Match : MAM (HMM E-Value=0.00035) 31 4.5
SB_53131| Best HMM Match : MbeB_N (HMM E-Value=2) 30 7.8
SB_40301| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.8
SB_24118| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.8
SB_2987| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.8
SB_51448| Best HMM Match : DUF910 (HMM E-Value=9.5) 30 7.8
SB_11967| Best HMM Match : Pollen_allerg_2 (HMM E-Value=1.7) 30 7.8
>SB_36184| Best HMM Match : UBA (HMM E-Value=2.4e-09)
Length = 1337
Score = 56.8 bits (131), Expect = 6e-08
Identities = 72/256 (28%), Positives = 107/256 (41%), Gaps = 36/256 (14%)
Query: 410 PTIVVPVSGRSARALTARLDALELDTGFRRAGQPGTVSALRD------ADATSVQLPLAC 463
P I+VP S +S+ L A L L L F PGT+S +DA+ + C
Sbjct: 20 PVILVPRSAKSSHMLVADLGDLTLKNCFLWEESPGTISHNTGQKRRTLSDASKAKTRHTC 79
Query: 464 PHVARCLTTRAEVTMRCWLHQGERELLEVRTVKLEGLSLRCGRGXXXXXXXXXXXXCIER 523
+ C+T V M + E E+ R +G +ER
Sbjct: 80 --LLDCMTIDL-VDMDLFTAVREPEVPVSREFTYTP------QGVKLLKEKCRLNLQVER 130
Query: 524 NLDPTHN--VADMTIQGTLATLVCSVDAAQYGVVRGVLDHNLGDILXXXXXXXXXXXH-- 579
NLD + V D G L+++ +D +QY ++ G+L N G+ L
Sbjct: 131 NLDWAFSRAVPDFLFSGRLSSVSAGLDYSQYCLILGLLGENFGEELEEFERPSSYLHDPL 190
Query: 580 ------QQVWTTLSIRLELLDVTVRLEP----EHG-------VTSLACINFIKSRLLVEI 622
+ VWTTL + + L++V++ L P EH + SLA I+FI+S E
Sbjct: 191 GPPPESEDVWTTLRMSIVLVNVSLELLPVQLFEHPEQASDAPLPSLARIDFIRSTFEFET 250
Query: 623 YSDLSQDIDLVSQVAI 638
+SD S+ IDLVS I
Sbjct: 251 FSDWSKTIDLVSSEVI 266
>SB_19851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 31.9 bits (69), Expect = 1.9
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 139 RADVGEG----ERSLVELSLQQLALHYRRA---RPHHTALQEKDKAKKQENKCGATPPC- 190
RA GEG +LVE++ + YR R ++ L++K+ + +E + + PP
Sbjct: 37 RAKRGEGTGPIRLALVEVNRWGVYQAYRMLAIKRAWYSLLEKKEAREAEEPEDPSLPPPI 96
Query: 191 -SPEGEGDTEDDAQFDDSPSSDDDN 214
P+ E D +DD D+ DDD+
Sbjct: 97 ERPDSEDDNDDDNDDGDNDDDDDDD 121
>SB_3153| Best HMM Match : PAN (HMM E-Value=0.0028)
Length = 285
Score = 31.5 bits (68), Expect = 2.6
Identities = 12/16 (75%), Positives = 13/16 (81%)
Query: 645 HARPHARTHARTHSLT 660
HAR HARTHA TH+ T
Sbjct: 267 HARTHARTHAHTHTYT 282
Score = 31.1 bits (67), Expect = 3.4
Identities = 13/22 (59%), Positives = 15/22 (68%)
Query: 639 GYVVCPHARPHARTHARTHSLT 660
G + AR HARTHARTH+ T
Sbjct: 257 GVITHTQARTHARTHARTHAHT 278
>SB_29| Best HMM Match : DUF1635 (HMM E-Value=1.9)
Length = 183
Score = 31.5 bits (68), Expect = 2.6
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 219 SVHT-TDPEHPDLNLVINIDSWVAVLDFFGI 248
SVH + L+ VIN+ +WV VL+FFGI
Sbjct: 94 SVHRRVQVDFNSLDTVINLQTWVLVLEFFGI 124
>SB_35575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 303
Score = 31.1 bits (67), Expect = 3.4
Identities = 16/81 (19%), Positives = 36/81 (44%)
Query: 163 RARPHHTALQEKDKAKKQENKCGATPPCSPEGEGDTEDDAQFDDSPSSDDDNLVCVSVHT 222
RAR H ++ + + N + + D +DD DD +++N++ ++ +T
Sbjct: 7 RARAHENRCLQRAQINENNNNNNNDDDDDDDDDDDDDDDDDDDDDDDDNNNNIIPINTNT 66
Query: 223 TDPEHPDLNLVINIDSWVAVL 243
+ + L+I+ V V+
Sbjct: 67 DMKLYLSVFLIISCQCVVEVI 87
>SB_12629| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 31.1 bits (67), Expect = 3.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 193 EGEGDTEDDAQFDDSPSSDDDNLVCVSVHTTDPEHPDL 230
+ + D +DD DD DDD+LV + + P DL
Sbjct: 386 DDDADDDDDDDDDDDDDDDDDDLVSIMFRSCWPSEQDL 423
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 31.1 bits (67), Expect = 3.4
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 167 HHTALQEKDKAKKQENKCGATPPCSPEGEGDTEDDAQFDDSPSSDDDN 214
++ LQ + KK P +GD +DD DD DDD+
Sbjct: 405 NYNLLQSLRQRKKSRKTSAKRQPTGDNRDGDDDDDDDDDDDDDDDDDD 452
>SB_30862| Best HMM Match : MAM (HMM E-Value=0.00035)
Length = 330
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 191 SPEGEGDTEDDAQFDDSPSSDDDNLV 216
S +G D+EDD DDS SDDD ++
Sbjct: 50 SDDGGDDSEDDGVGDDSDDSDDDGVL 75
>SB_53131| Best HMM Match : MbeB_N (HMM E-Value=2)
Length = 374
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/53 (32%), Positives = 24/53 (45%)
Query: 164 ARPHHTALQEKDKAKKQENKCGATPPCSPEGEGDTEDDAQFDDSPSSDDDNLV 216
A+PH T+L + + + SPEG GD +D D S +S D V
Sbjct: 1 AQPHCTSLAVVFHYRASPSSSHSQSSGSPEGSGDDDDQDDVDLSTNSSDSGEV 53
>SB_40301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2653
Score = 29.9 bits (64), Expect = 7.8
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 665 QEILVSDTRFAAEPANRRANVFARIVQPMPEHPHSVQAEVHARKRQDSSAYTILINNMRL 724
Q + +S+ +P NRR+ + +P P++ S +E +A+ + D+ I N +L
Sbjct: 1502 QRLAISEGNAKLKPDNRRSAISEGNAKPKPDNRRSATSEENAKLKPDNQRSPISEENDKL 1561
>SB_24118| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/61 (22%), Positives = 31/61 (50%)
Query: 155 QQLALHYRRARPHHTALQEKDKAKKQENKCGATPPCSPEGEGDTEDDAQFDDSPSSDDDN 214
QQ ++ + H+ QE+ + ++ +N+ +PP SP G+ + + +Q D ++
Sbjct: 683 QQQQQQQQQDQQHYQPSQEQQQQQQNDNQQQKSPPTSPPGQQEQQPLSQQQDIQQERQNS 742
Query: 215 L 215
L
Sbjct: 743 L 743
>SB_2987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/53 (32%), Positives = 24/53 (45%)
Query: 164 ARPHHTALQEKDKAKKQENKCGATPPCSPEGEGDTEDDAQFDDSPSSDDDNLV 216
A+PH T+L + + + SPEG GD +D D S +S D V
Sbjct: 1 AQPHCTSLAVVFHYRASPSSSHSQSSGSPEGSGDDDDQDDVDLSTNSSDSGEV 53
>SB_51448| Best HMM Match : DUF910 (HMM E-Value=9.5)
Length = 201
Score = 29.9 bits (64), Expect = 7.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 193 EGEGDTEDDAQFDDSPSSDDDN 214
+G+GD +DD DD DDDN
Sbjct: 88 DGDGDGDDDDDDDDDDDDDDDN 109
>SB_11967| Best HMM Match : Pollen_allerg_2 (HMM E-Value=1.7)
Length = 1815
Score = 29.9 bits (64), Expect = 7.8
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 124 PLIVRAEVPALSVRLRADVGEGERSLVELSLQQLALHYRRARPHHTALQ 172
P++ VP S++L ++ E +V++ L+Y+ +P T +
Sbjct: 1738 PIVANVTVPHFSIKLCGELQNVEHEIVDIKFSDFYLNYQNVKPTLTQFE 1786
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.134 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,048,971
Number of Sequences: 59808
Number of extensions: 713695
Number of successful extensions: 5506
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 5409
Number of HSP's gapped (non-prelim): 79
length of query: 753
length of database: 16,821,457
effective HSP length: 88
effective length of query: 665
effective length of database: 11,558,353
effective search space: 7686304745
effective search space used: 7686304745
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)
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