Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002843-TA|BGIBMGA002843-PA|undefined
(1415 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0959 - 21813756-21814097,21814462-21814570,21814688-218147... 140 1e-32
02_03_0180 - 16031366-16031445,16031950-16032022,16032148-160321... 129 1e-29
08_01_0114 - 900530-901191,901269-901338,901536-901640,901721-90... 63 2e-09
01_06_0473 - 29598704-29599642 32 3.8
05_04_0373 + 20732358-20732675,20733555-20734440,20734523-20735625 31 6.7
07_03_1143 - 24294516-24294528,24294656-24297926,24298011-24298056 31 8.8
>10_08_0959 -
21813756-21814097,21814462-21814570,21814688-21814740,
21814849-21815049,21815320-21815433,21815513-21815671,
21816490-21816849,21816928-21817149,21817967-21818093,
21818887-21819023,21819169-21819292,21819665-21820174,
21820255-21820436,21820812-21820862,21821114-21821266,
21821339-21821437,21821519-21821861,21821957-21822030,
21822105-21823025,21823133-21823257,21823419-21823461,
21823574-21823762,21824814-21825074,21825228-21825387,
21826200-21826363,21826523-21827009,21827090-21827431,
21827519-21827836,21828001-21828041,21828136-21828388,
21829158-21829261,21830198-21830386,21830543-21831196,
21831320-21831610,21831739-21831882,21832107-21832205,
21832549-21832657,21832739-21832923,21833008-21833121,
21833270-21833401,21833483-21833815,21833945-21834436,
21834773-21834847,21834917-21835066,21835143-21835241,
21835463-21835547,21837188-21837375,21837513-21837647,
21837729-21837849,21838127-21838194,21838275-21838370,
21838450-21838554,21838665-21838980,21839053-21839142,
21840011-21840181,21840850-21841010,21841088-21841270,
21841839-21841940,21842515-21842632,21842704-21842798,
21842972-21843022,21843107-21843241,21843333-21843436,
21844249-21844414,21844649-21844773,21845220-21845316
Length = 4181
Score = 140 bits (338), Expect = 1e-32
Identities = 104/361 (28%), Positives = 179/361 (49%), Gaps = 27/361 (7%)
Query: 31 LSGKVELENLPLKKDALRHLGLPVEVKAGFIGKVQLQIPVRQIRSAPWVIAIEKLYLVAA 90
+ G VEL N+ LK +AL L LPV VKAGF+G V+L++P ++ P ++ +++++++A
Sbjct: 128 MQGDVELTNMQLKPEALNSLKLPVRVKAGFLGSVKLKVPWSRLGQEPVLVYLDRIFILAE 187
Query: 91 PVNLDEWDSEAEAHHAHERKVALLD--ALEAQWRAEHEASDAGYYATSYSSWLSYGTGLL 148
P E SE A +V ++ LE+Q + + E + SSWL +
Sbjct: 188 PATQVEGCSEDAVQEAKRSRVREMEMKLLESQQQLKSELN---------SSWLG---SFI 235
Query: 149 ANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLAAESCDASWKKWFSLLPDPEGR 207
+ ++ N++L I ++H+RYEDT + G FA GL L+A + D K+ F+ D + R
Sbjct: 236 STVIGNIKLSISNIHIRYEDTESNPGHPFAAGLALSKLSAFTVDDRGKETFATGGDLD-R 294
Query: 208 SHKLLELQQLALYWDPISTPSAM---LAELGIAELTE----RMRETWR---AGHAYVLAP 257
K +EL+ LALY+D S+P ++ +L +E ++ R +++ H Y+L P
Sbjct: 295 VKKSVELESLALYFDSDSSPWSVDKSWEDLLPSEWSQIFEFRKQDSSNPPSKTHTYILRP 354
Query: 258 TSARARVCRERTEQPLRCRERPRLACQLTLDTVLLNLTSRQYSEAVGCALGLERIGRVRE 317
S +A+ + + ++ + + + A + LD V L+L+ Y + + A + +
Sbjct: 355 ISGKAKYTKIQLDEAKKTGQALQNAA-VDLDDVTLSLSKDGYRDVLKMADNFSSFNQRLK 413
Query: 318 FRALRPSVPVKGHVRDWWIYALSCHMPHNRWRHPRPSWXXXXXXXXXXXXYVRVCLQLVT 377
+ RPS+PVK R WW YA + + SW YV V L+
Sbjct: 414 YAHYRPSLPVKSDPRSWWKYAYKVVVHETKKASGNLSWEQLLKNARLRKTYVSVYASLLK 473
Query: 378 S 378
S
Sbjct: 474 S 474
Score = 31.5 bits (68), Expect = 5.0
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 1 MLEGLVAWVLNNYLGKYVENLNTDQLSIAL 30
MLE VA++L YLG YV L+ + L I++
Sbjct: 1 MLEDQVAFLLQKYLGNYVRGLSKEALKISV 30
>02_03_0180 -
16031366-16031445,16031950-16032022,16032148-16032186,
16032434-16032715,16032790-16032948,16033034-16033390,
16033482-16033622,16033919-16034045,16034121-16034263,
16034740-16034917,16035019-16035552,16035628-16035812,
16036551-16036637,16036710-16036850,16036896-16037175,
16037944-16038020,16038326-16039138,16039292-16039801,
16039926-16040056,16040192-16040246,16040364-16040564,
16040640-16040909,16041103-16041184,16041271-16041434,
16041532-16041690,16041762-16042083,16042158-16042544,
16042811-16042999,16043233-16043317,16043458-16043753,
16043862-16043965,16044484-16044513,16044602-16044817,
16044923-16045540,16045718-16045993,16046619-16046762,
16046854-16046962,16047291-16047475,16047557-16047670,
16048348-16048479,16048929-16049249,16049424-16049891,
16054482-16054547,16054691-16054828,16054917-16055015,
16057098-16057194,16057661-16057761,16057858-16058085,
16059175-16059381,16059451-16059571,16059921-16059988,
16060148-16060213,16060396-16060509,16060949-16061300,
16063571-16063663,16063764-16063922,16064224-16064287,
16064385-16064577,16064673-16064710,16065510-16065645,
16065726-16065914,16065994-16066095,16067660-16067777,
16067861-16067964,16070338-16070346,16071428-16071475,
16071581-16071676,16072430-16072533,16073964-16074045,
16076573-16076601,16076708-16076963
Length = 4246
Score = 129 bits (312), Expect = 1e-29
Identities = 101/348 (29%), Positives = 163/348 (46%), Gaps = 33/348 (9%)
Query: 5 LVAWVLNNYLGKYVENLNTDQLSIALLSGKVELENLPLKKDALRHLGLPVEVKAGFIGKV 64
+V ++L YLG+YVE L+ + L I++ G V L++L LK DAL L LPV VKAGF+G +
Sbjct: 95 MVLYLLRKYLGEYVEGLSVETLRISVWQGDVVLKDLKLKADALNSLRLPVTVKAGFVGTI 154
Query: 65 QLQIPVRQIRSAPWVIAIEKLYLVAAPVNLDEWDSEAEAHHAHERKVALLDALEAQWRAE 124
L++P + + P ++ I++L+++A P + E + E K+ ++ +
Sbjct: 155 TLKVPWKSLGKEPVIVLIDRLFVLAHPAPDGQTLKEEDREKLFEAKLQQIENRK------ 208
Query: 125 HEASDAGYYATSYSSWLSYGTGLLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQ 183
+SWL L++ I+ NL++ I +VH+RYED+V+ G FA G T
Sbjct: 209 ---------VPGSNSWL---YNLISTIIGNLKVTISNVHIRYEDSVSNSGHPFASGFTLS 256
Query: 184 SLAAESCDASWKKWFSLLPDPEGRSHKLLELQQLALYWDPISTP---SAMLAELGIAELT 240
LAA + D + F + + K +EL +LA+Y D S+ + +L E
Sbjct: 257 RLAAVTVDEDGNETFDAGVALD-KLRKSVELHRLAIYHDSDSSAWKLAKKWEDLNPTEWG 315
Query: 241 ERMRE---------TWRAGHAYVLAPTSARARVCRERTEQPLRCRERPRLACQLTLDTVL 291
E ++ W Y++ P + + +Q + P L L V
Sbjct: 316 EIFQDGIDDHSGNSVWAMNRNYLVYPINGTLNY-KRLGKQERGGPDIPLEKASLVLSDVS 374
Query: 292 LNLTSRQYSEAVGCALGLERIGRVREFRALRPSVPVKGHVRDWWIYAL 339
L +T QY + + R + LRP VPVK R WW YA+
Sbjct: 375 LTVTEAQYYDGIKLLETFSRFRTRVDVSHLRPIVPVKVDCRAWWRYAV 422
>08_01_0114 -
900530-901191,901269-901338,901536-901640,901721-901831,
901912-902016,902245-902391,903273-903354,903445-903786,
903873-904177,904259-904435,904799-904852,905171-905254,
905855-905968,906048-906321,907552-907926,908003-908267,
908352-908538,908615-909052,909895-909966,910037-910630,
911471-911623,911700-911828,912326-912657,912705-912840,
913046-913491,913580-915087,915169-915431,915622-915738,
915844-916014,916743-916845,916930-916988,918360-918461,
918560-918649,918727-918877,919745-919830,919926-920102,
920915-920978,921859-922008,923132-923211,923311-923376,
924540-924747,925502-925575,925761-925848,926140-926312,
926541-926609,926698-926741,927074-927167,927290-927366,
927475-927552,927992-928085
Length = 3314
Score = 62.9 bits (146), Expect = 2e-09
Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 21/168 (12%)
Query: 1 MLEGLVAWVLNNYLGKYVENLNTDQLSIALLSGKVELENLPLKKDALRHLGLPVEVKAGF 60
M E LV+ VL LG+YV + DQL+I + + ++ L ++ L +A +L LP +K G
Sbjct: 1 MFEDLVSKVLPALLGRYV-SFQKDQLTINIWNQEIILVDVELILEAFDYLQLPFALKKGR 59
Query: 61 IGKVQLQIPVRQIRSAPWVIAIEKLYLVAAPVNLDEWDSEAEAHHAHERKVALLDALEAQ 120
IGK+ ++IP + + +IAIE +W S++ + K+A L A+E
Sbjct: 60 IGKLSVRIPWKTLGWGAIIIAIE------------DWSSDSLDKRELDGKLAKLKAIELA 107
Query: 121 WRAEHEASDAGYYATSYSSWLSYGTGLLANIVENLQLKIIDVHLRYED 168
+ +D + S LSY +LA I++N+Q+ I +VH+ Y D
Sbjct: 108 -KISRRITD----NQTGQSLLSY---ILAKILDNIQVSIRNVHITYAD 147
>01_06_0473 - 29598704-29599642
Length = 312
Score = 31.9 bits (69), Expect = 3.8
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 186 AAESCDASWKKWFSLLPDPEGRSHKLLELQQLAL--YWDPISTPSAMLAELGIAELTERM 243
A + C W+ SLLP P G L + L L + +P+ P+A+ +L R+
Sbjct: 144 AEDGCAPEWRTVASLLPRPFGPHDLLPKHVPLVLEPHDNPLGEPAAVANGFAHGDLEARL 203
Query: 244 RETWRAGHAYVLAPTS 259
RE A AP S
Sbjct: 204 REAAEAAARAAHAPYS 219
>05_04_0373 + 20732358-20732675,20733555-20734440,20734523-20735625
Length = 768
Score = 31.1 bits (67), Expect = 6.7
Identities = 24/118 (20%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Query: 25 QLSIALLSGKVELENLPLKKDALRH-LGLPVEVKAGFIGKVQLQIPVRQIRSAPWVIAIE 83
+L +A++ E+ P + +R + L + +A ++G + R R+ W +A++
Sbjct: 198 ELDVAIVKATRHSESFPADERHVREVIALTLHSRA-YVGACVASLSRRLGRTRSWAVALK 256
Query: 84 KLYLVAAPVNLDEWDSEAEAHHAHERKVALLDALEAQWRAEHEASDAGYYATSYSSWL 141
L LV + + E E +A R +L+ + + +A D + +Y+++L
Sbjct: 257 TLALVHRLLADGDQAFEQEVFYATRRGTRMLNMSDFCDHSRTDAWDFSAFVRTYAAYL 314
>07_03_1143 - 24294516-24294528,24294656-24297926,24298011-24298056
Length = 1109
Score = 30.7 bits (66), Expect = 8.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 654 EALARWAQRFARRGWDARLALDSTRATL 681
E L W++R A+ GW AR A S+ A L
Sbjct: 1040 ECLVEWSRRMAQEGWPAREAAASSGAVL 1067
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.133 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,549,779
Number of Sequences: 37544
Number of extensions: 1245243
Number of successful extensions: 3243
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3224
Number of HSP's gapped (non-prelim): 15
length of query: 1415
length of database: 14,793,348
effective HSP length: 91
effective length of query: 1324
effective length of database: 11,376,844
effective search space: 15062941456
effective search space used: 15062941456
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 66 (30.7 bits)
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