GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002842-TA|BGIBMGA002842-PA|undefined
         (349 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069622-1|AAL39767.1|  437|Drosophila melanogaster LD39211p pro...   207   2e-53
AE013599-544|AAF59164.2|  437|Drosophila melanogaster CG14764-PA...   207   2e-53

>AY069622-1|AAL39767.1|  437|Drosophila melanogaster LD39211p
           protein.
          Length = 437

 Score =  207 bits (506), Expect = 2e-53
 Identities = 106/274 (38%), Positives = 167/274 (60%), Gaps = 15/274 (5%)

Query: 84  LLTYARGDQHAQVVGFVR-AAAKLPYT-ILLYNLGLKSYSLTVVSNYCNSSKCAIIDFDL 141
           +++Y    Q A  +   +  AAKLP   +L+Y+LG+    L  +  YCN+S+C++I +DL
Sbjct: 158 IVSYVLEGQAASAILLAQNIAAKLPSEYLLIYDLGVSEEQLRDLGAYCNNSRCSVITYDL 217

Query: 142 DAFPSHVSDESIYAFRPLIIQHALSRVGGVIFSEPSLRWAGSAGALGGVWE--------R 193
             FPS V+D+  +A+RP++I+  L R   V+F E S+R  G +  L  +          +
Sbjct: 218 SEFPSFVADQRTHAYRPIVIKDGLMRARSVLFLENSMRVRGGSAQLRSLQSIVMNPGVGK 277

Query: 194 ARASRVGVVAWPRRAAVTSLTHPRMFHYFHADVDDFLFVQMLDVSKLVVAETPALPD-VM 252
           +     GV+ W    AV+SLTHP+MF YF +  ++F F++M+D+  +  +++  + + +M
Sbjct: 278 SAVKSAGVLGWNTATAVSSLTHPKMFDYFESKAEEFNFLRMVDLDAVFFSDSSLVAEKIM 337

Query: 253 RPWIQCALTVECIMPIGAQSAGCRFDKKPQYRYSGCHGQDASALSIVLGLRAGFEEAQYA 312
            PW++C LT+ECI PIGAQS GC+F+KKP +RYSGCHG DASA +IVLGL    + ++Y+
Sbjct: 338 LPWLKCCLTLECIDPIGAQSNGCKFNKKPMFRYSGCHGYDASAFNIVLGLTFQMDTSEYS 397

Query: 313 ----GGRAAWRRETDEEARRALSVLRRNASLADD 342
                 R  + +E+ E+A R L   RRN+S   D
Sbjct: 398 LPGDSPRNIFYKESLEQATRILESRRRNSSETSD 431



 Score = 48.8 bits (111), Expect = 1e-05
 Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 3/77 (3%)

Query: 1  MKTKSFLVFSTSVFAISIFLIVFH--SQPPQSIQSIVTQTHQHIKDFQENLR-DVEESNL 57
          M+TK  ++    V   +I  I F    +P  S ++IV QTHQ  K+FQENLR  +E   L
Sbjct: 1  MRTKHLILILIGVIIATIVFIAFGPAGEPNDSFKNIVVQTHQQFKEFQENLRVGLERKKL 60

Query: 58 VQEDRYEKLVGLGSHVE 74
            + +Y  L+G  S  E
Sbjct: 61 EIDPKYLLLLGFTSSNE 77


>AE013599-544|AAF59164.2|  437|Drosophila melanogaster CG14764-PA
           protein.
          Length = 437

 Score =  207 bits (506), Expect = 2e-53
 Identities = 106/274 (38%), Positives = 167/274 (60%), Gaps = 15/274 (5%)

Query: 84  LLTYARGDQHAQVVGFVR-AAAKLPYT-ILLYNLGLKSYSLTVVSNYCNSSKCAIIDFDL 141
           +++Y    Q A  +   +  AAKLP   +L+Y+LG+    L  +  YCN+S+C++I +DL
Sbjct: 158 IVSYVLEGQAASAILLAQNIAAKLPSEYLLIYDLGVSEEQLRDLGAYCNNSRCSVITYDL 217

Query: 142 DAFPSHVSDESIYAFRPLIIQHALSRVGGVIFSEPSLRWAGSAGALGGVWE--------R 193
             FPS V+D+  +A+RP++I+  L R   V+F E S+R  G +  L  +          +
Sbjct: 218 SEFPSFVADQRTHAYRPIVIKDGLMRARSVLFLENSMRVRGGSAQLRSLQSIVMNPGVGK 277

Query: 194 ARASRVGVVAWPRRAAVTSLTHPRMFHYFHADVDDFLFVQMLDVSKLVVAETPALPD-VM 252
           +     GV+ W    AV+SLTHP+MF YF +  ++F F++M+D+  +  +++  + + +M
Sbjct: 278 SAVKSAGVLGWNTATAVSSLTHPKMFDYFESKAEEFNFLRMVDLDAVFFSDSSLVAEKIM 337

Query: 253 RPWIQCALTVECIMPIGAQSAGCRFDKKPQYRYSGCHGQDASALSIVLGLRAGFEEAQYA 312
            PW++C LT+ECI PIGAQS GC+F+KKP +RYSGCHG DASA +IVLGL    + ++Y+
Sbjct: 338 LPWLKCCLTLECIDPIGAQSNGCKFNKKPMFRYSGCHGYDASAFNIVLGLTFQMDTSEYS 397

Query: 313 ----GGRAAWRRETDEEARRALSVLRRNASLADD 342
                 R  + +E+ E+A R L   RRN+S   D
Sbjct: 398 LPGDSPRNIFYKESLEQATRILESRRRNSSETSD 431



 Score = 48.8 bits (111), Expect = 1e-05
 Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 3/77 (3%)

Query: 1  MKTKSFLVFSTSVFAISIFLIVFH--SQPPQSIQSIVTQTHQHIKDFQENLR-DVEESNL 57
          M+TK  ++    V   +I  I F    +P  S ++IV QTHQ  K+FQENLR  +E   L
Sbjct: 1  MRTKHLILILIGVIIATIVFIAFGPAGEPNDSFKNIVVQTHQQFKEFQENLRVGLERKKL 60

Query: 58 VQEDRYEKLVGLGSHVE 74
            + +Y  L+G  S  E
Sbjct: 61 EIDPKYLLLLGFTSSNE 77


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.323    0.135    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,428,571
Number of Sequences: 52641
Number of extensions: 667382
Number of successful extensions: 1372
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1362
Number of HSP's gapped (non-prelim): 4
length of query: 349
length of database: 24,830,863
effective HSP length: 86
effective length of query: 263
effective length of database: 20,303,737
effective search space: 5339882831
effective search space used: 5339882831
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 62 (29.1 bits)