Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002841-TA|BGIBMGA002841-PA|IPR001315|Caspase
Recruitment, IPR002138|Peptidase C14, caspase non-catalytic subunit
p10, IPR001309|Caspase, p20 subunit, IPR011600|Peptidase C14, caspase
catalytic, IPR002398|Peptidase C14, caspase precursor p45,
IPR011029|DEATH-like
(410 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50| Best HMM Match : Peptidase_C14 (HMM E-Value=0) 100 4e-21
SB_21140| Best HMM Match : Peptidase_C14 (HMM E-Value=0) 97 3e-20
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 6e-15
SB_50362| Best HMM Match : Peptidase_C14 (HMM E-Value=0) 74 2e-13
SB_54787| Best HMM Match : Peptidase_C14 (HMM E-Value=0) 73 3e-13
SB_23468| Best HMM Match : Peptidase_C14 (HMM E-Value=8.7e-34) 66 6e-11
SB_7059| Best HMM Match : Peptidase_C14 (HMM E-Value=5.1e-33) 51 2e-06
SB_19622| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_30760| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.006
SB_58232| Best HMM Match : PI3K_p85B (HMM E-Value=9.1) 34 0.24
SB_22562| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.24
SB_30598| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.42
SB_59271| Best HMM Match : LRR_1 (HMM E-Value=0.014) 32 0.97
SB_56001| Best HMM Match : CARD (HMM E-Value=6.8e-13) 31 1.3
SB_16652| Best HMM Match : I-set (HMM E-Value=1.2e-37) 31 1.3
SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 31 1.7
SB_44582| Best HMM Match : CARD (HMM E-Value=8.7e-21) 31 2.2
SB_19521| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.9
SB_1712| Best HMM Match : Peptidase_C14 (HMM E-Value=1.6e-21) 30 3.9
SB_42487| Best HMM Match : Extensin_2 (HMM E-Value=0.084) 29 5.2
SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_22230| Best HMM Match : CARD (HMM E-Value=3.8e-17) 29 5.2
SB_50496| Best HMM Match : FHA (HMM E-Value=7.8e-07) 29 6.9
>SB_50| Best HMM Match : Peptidase_C14 (HMM E-Value=0)
Length = 427
Score = 99.5 bits (237), Expect = 4e-21
Identities = 93/385 (24%), Positives = 167/385 (43%), Gaps = 41/385 (10%)
Query: 1 MQEEHKKAIQRNFSSLVEGTDLDSMVMALYEKGVFSQQMIEPYRDTSITPRERKRILYRE 60
M H++ ++ + L++ + D + LY G+ + +E + + +E+ IL +
Sbjct: 36 MDPAHRRTLRTHRLDLIKDLEADKVASTLYGVGILDETDLEDIKAAKPS-QEKAEILLDK 94
Query: 61 ITRRGPQAFTMLLEALREMGHWDLVRDLDPNSPLQL-RARRPVLPPTRQGSDAXXXXXXX 119
+ +RGP AF+ +AL ++ L L P+ + V QG
Sbjct: 95 LPKRGPDAFSKFCDALEDISP-HLASYLRPSQTKDSGKLSGDVEDGAAQGPIESVDGGNA 153
Query: 120 NSSEPVAIPCFHVKKSTHFFEDDVSRDIQLYRTRSRKRGVLVVFSYISFL----LNIEPN 175
++ S+ S D+ +Y+ RGV V+ + FL ++ P
Sbjct: 154 EGGGLTVDGGLNIFGSSSK-SSSPSGDLHIYKMDKTPRGVAVIINNKDFLPASGMHRYP- 211
Query: 176 RDGVNVDCDKLKYLFSEIGFEVLTYQNLTLEQTRATLEQMSS-VLAGYECVFLVVSSHGH 234
R+G NVD D L+ F + F+V + N T +T ++++ + Y + + +HG
Sbjct: 212 RNGTNVDRDSLEKTFKALQFDVEVHNNKTTYETNRIIKELGQRSYSNYNAMIFAILTHGE 271
Query: 235 ERRYSSDTDIRCSDGKFISLYAIVDYFNNRKLPNFTDLPKVFIFQACRGENEDFVQGGGA 294
E + +DG I + +++ F K N PK+FIFQAC+G +++ G A
Sbjct: 272 E------GILYTTDGT-IEIRSMMKAF---KGDNLVGKPKIFIFQACQG--HEYMDGKDA 319
Query: 295 LAPAPQVARDGAVXXXXXXXXXXXXXXXXXEKPLYSNILIANSTLPGFISHRDVKAGSWY 354
P+ A + P+ ++ L A ST+PG+ S R+ GSW+
Sbjct: 320 TDAGPEDAN-------------------RVQVPVEADFLYAYSTVPGYYSWRNSVNGSWF 360
Query: 355 IQVLCEVFAERAHDCHVDELFTLVD 379
IQ +CEVF + H+ V + T V+
Sbjct: 361 IQSICEVFNKHMHNMDVLRMMTRVN 385
>SB_21140| Best HMM Match : Peptidase_C14 (HMM E-Value=0)
Length = 377
Score = 96.7 bits (230), Expect = 3e-20
Identities = 89/377 (23%), Positives = 164/377 (43%), Gaps = 30/377 (7%)
Query: 1 MQEEHKKAIQRNFSSLVEGTDLDSMVMALYEKGVFSQQMIEPYRDTSITPRERKRILYRE 60
M+++H+ +++N +L + ++ ++++GVFS++ IE + + +RIL
Sbjct: 1 MEQKHRNLLRKNRVALARDLEPREVLNYIFQEGVFSERDIETVNSLTTRQTQAERIL-DI 59
Query: 61 ITRRGPQAFTMLLEALREMG---HWDLVRDLDPNS-------PLQLRARRPVLPPTRQGS 110
+ RRGP+AF + +AL + H L+ + ++ P Q + + PV P S
Sbjct: 60 LPRRGPRAFPVFCDALYQSEANTHLALILQANISAGTQETEPPKQHKEKLPVKTPVESDS 119
Query: 111 DAXXXXXXXNSSEPVAIPCFHVKKSTHFFEDDVSRDIQLYRTRSRKRGVLVVFSYISFLL 170
+ +P P + + +DD+ Y+ G ++ + + F
Sbjct: 120 -GISDLGTFPTDQPTVKPV-DPNATINQSDDDI------YKMNRDPHGWCLIINNVRFDA 171
Query: 171 NIE-PNRDGVNVDCDKLKYLFSEIGFEVLTYQNLTLEQTRATLEQMS-SVLAGYECVFLV 228
+ +R G ++D L+ LF + + V +LT+ Q + TL + + + V +
Sbjct: 172 DSGLKSRAGSDIDASNLQSLFMSLRYRVKRLNDLTMRQMKNTLFDFAKNNHKNSDSVVVC 231
Query: 229 VSSHGHERRYSSDTDIRCSDGKFISLYAIVDYFNNRKLPNFTDLPKVFIFQACRGENEDF 288
+ SHG E R I DG +++ ++ FN + + PK+F QACRG + D
Sbjct: 232 ILSHGLEGR------IYGVDGGLLNISDVISMFNGYQAKDLIGKPKLFFLQACRGGDFDH 285
Query: 289 VQGGGALAPAPQVARDGAVXXXXXXXXXXXXXXXXXEK---PLYSNILIANSTLPGFISH 345
+ V EK P ++ LIA +T+PG++S
Sbjct: 286 GARMEQIDSPTDVEEKTTTEQIIDEIFPEEIDSGFLEKSSLPSEADFLIAYATVPGYVSW 345
Query: 346 RDVKAGSWYIQVLCEVF 362
R + GSW+IQ L EVF
Sbjct: 346 RHQEKGSWFIQALVEVF 362
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 79.0 bits (186), Expect = 6e-15
Identities = 56/231 (24%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 150 YRTRSRKRGVLVVFSYISFLLNIEPNRDGVNVDCDKLKYLFSEIGFEVLTYQNLTLEQTR 209
Y RG+ ++ + ++++ N R+G N D + L+ LF ++ F V+ +L R
Sbjct: 480 YSMTKTPRGICLIINNMNYIGN---RRNGANNDVNALRRLFKDLHFCVIIKTDLASRDLR 536
Query: 210 ATLEQMSSV-LAGYECVFLVVSSHGHERRYSSDTDIRCSDGKFISLYAIVDYFNNRKLPN 268
T ++ + + + ++ V+ SHG E D + C DG+ + L ++ F +
Sbjct: 537 ETFQEYAMMDHSNFDAFACVIMSHGGE----GDV-LNCMDGRDVRLEDLMTEFKSLHCAT 591
Query: 269 FTDLPKVFIFQACRGENEDFVQGGGALAPAPQVARDGAVXXXXXXXXXXXXXXXXXEKPL 328
PK+F QACRG +++ ++ P+ + G V P+
Sbjct: 592 LAGKPKMFFVQACRGSDKENLENISHSTPSFD-SIPGEVLERDSSLPRSL-------NPV 643
Query: 329 YSNILIANSTLPGFISHRDVKAGSWYIQVLCEVFAERAHDCHVDELFTLVD 379
+++L+A +T PG++++R GS++I+ L E E H+ E+ TLV+
Sbjct: 644 EADVLLAYATPPGYVAYRSPTDGSFFIRALVETMREYHQKYHLLEILTLVN 694
>SB_50362| Best HMM Match : Peptidase_C14 (HMM E-Value=0)
Length = 501
Score = 73.7 bits (173), Expect = 2e-13
Identities = 70/263 (26%), Positives = 102/263 (38%), Gaps = 24/263 (9%)
Query: 128 PCFHVKKSTHFFEDDVSRDIQLYRTRSRKRGVLVVFSYISFLLNIEPNRDGVNVDCDKLK 187
P F V+ D ++ Y SR RG+ ++ S F RDG D + LK
Sbjct: 241 PRFPVQCEEAVMPLDELDEMPAYPMTSRPRGICLIISNQHFDKPELRKRDGNEQDVENLK 300
Query: 188 YLFSEIGFEVLTYQNLTLEQTRATLEQMSSV-LAGYECVFLVVSSHGHERRYSSDTDIRC 246
F + F V Q+ T + + SS+ + Y+ + SHG I
Sbjct: 301 RTFENLHFVVEIRQDKTASEMYTIAREFSSIDHSAYDLFVCCILSHGMLG------SIYG 354
Query: 247 SDGKFISLYAIVDYFNNRKLPNFTDLPKVFIFQACRGENEDFVQGGGALAPAPQVARDGA 306
SD I + I F P PK+F QACRG +DF +G A A A D
Sbjct: 355 SDSNLIEINEISSQFKGNACPTLAHKPKLFFIQACRG--QDFDRGIQADATRDMDASDAV 412
Query: 307 VXXXXXXXXXXXXXXXXXEKPLYSNILIANSTLPGFISHRDVKAGSWYIQVLCEVFAERA 366
+P S+ L+ +T PG++S R GSWYI LCEV +
Sbjct: 413 ---------------RQNAEPNESHFLLGYATPPGYVSWRSQVHGSWYISFLCEVLSTYC 457
Query: 367 HDCHVDELFTLVDKRLRLRFGRQ 389
+ + V+ ++ F R+
Sbjct: 458 ERYDLVTMMVKVNDKVSEAFTRK 480
>SB_54787| Best HMM Match : Peptidase_C14 (HMM E-Value=0)
Length = 277
Score = 73.3 bits (172), Expect = 3e-13
Identities = 59/228 (25%), Positives = 97/228 (42%), Gaps = 28/228 (12%)
Query: 156 KRGVLVVFSYISFLLNIEPNRDGVNVDCDKLKYLFSEIGFEVLTYQNLTLEQTRATLEQM 215
K+G +++ + F + R G D +L LF + G V T QN T + LE+
Sbjct: 49 KKGYVLIINNQEFPSRSDVERKGSAEDVKQLYQLFDDFGMTVKTIQNKTSLEMLELLEET 108
Query: 216 SSV-LAGYECVFLVVSSHGHERRYSSDTDIRCSDGKFISLYAIVDYFNNRKLPNFTDLPK 274
S ++C ++ SHG S + I D K + + ++ + F P+ PK
Sbjct: 109 SEKDFTKFDCFICIILSHG------SHSGIYGVDEKAVQVESLTNKFRGSTCPSLQGKPK 162
Query: 275 VFIFQACRGENEDFVQGGGALAPAPQVARDGAVXXXXXXXXXXXXXXXXXEKPLYSNILI 334
VF QACRG ++ V P P + G P S+ LI
Sbjct: 163 VFFLQACRGAKKELVAVESDSEPVP-IRHSGL--------------------PSDSDFLI 201
Query: 335 ANSTLPGFISHRDVKAGSWYIQVLCEVFAERAHDCHVDELFTLVDKRL 382
++ PG+ S+R + GSW+I+ + +VF H+ +L V+ R+
Sbjct: 202 CYASSPGYESYRHPELGSWFIRSIVDVFRHFGQTEHLMDLMLRVNHRV 249
>SB_23468| Best HMM Match : Peptidase_C14 (HMM E-Value=8.7e-34)
Length = 212
Score = 65.7 bits (153), Expect = 6e-11
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 15/212 (7%)
Query: 200 YQNLTLEQTRATLEQMS-SVLAGYECVFLVVSSHGHERRYSSDTDIRCSDGKFISLYAIV 258
Y +L+ ++T+A + +++ + Y+C+ + + SHG E I SDG + + I
Sbjct: 10 YLDLSYDETKAAVNKLALKDYSQYDCLAIFLMSHGKE------DFIYTSDGGELKINEIR 63
Query: 259 DYFNNRKLPNFTDLPKVFIFQACRGENEDFVQGGGALAPAPQVARDGAVXXXXXXXXXXX 318
F+N + PK+F QACRGE +DF G + P+ +
Sbjct: 64 KRFSNALCRSLAGKPKLFFIQACRGEKKDF---GTIVQDGPKPPEEHQETPYKFDLSPHN 120
Query: 319 XXXXXXEKPLYSNILIANSTLPGFISHRDVKAGSWYIQVLCEVFAERAHDCHVDELFTLV 378
E ++ L+A ST+ G S R+ GS +I+ L FA + V + T V
Sbjct: 121 KGASTAE---MADFLLAYSTVGGHASFRNTADGSRFIRALVTTFALHSGSEDVLSMLTRV 177
Query: 379 DKRLRLR--FGRQTSSVDRWGFNNKLYLHPGL 408
++ + + G + S KL+L PGL
Sbjct: 178 NREVNRQGDIGNKQVSQPETTLTKKLFLWPGL 209
>SB_7059| Best HMM Match : Peptidase_C14 (HMM E-Value=5.1e-33)
Length = 296
Score = 50.8 bits (116), Expect = 2e-06
Identities = 63/290 (21%), Positives = 122/290 (42%), Gaps = 36/290 (12%)
Query: 129 CFHVKKSTHFFEDDVSRDIQLYRTRSRKRGVLVVFSYISFLLNIEPNRDGVNVDCDKLKY 188
C H++ + FE ++Y+ S +G+ ++ S IS ++ R D + LK
Sbjct: 32 CPHIESMRNNFE-------KVYKMTSNPKGLAIIIS-ISRYDGLKGCRFKSEQDFNNLKN 83
Query: 189 LFSEIGFEVLTYQNLTLEQTRATLEQ-----MSSVLAGYECVFLVVSSHGHERRYSSDTD 243
LF IG+ + Q + Q++A LE+ + S+ +E + L V SHG +
Sbjct: 84 LFEGIGYTIAPLQEI---QSKAELEKELKQCVQSIQESHESLILAVMSHG------DERG 134
Query: 244 IRCSDGKFISLYAIVDYFNNRKLPNFTDLPKVFIFQACRGENEDFVQGGGALAPAPQVAR 303
+ +G+ + + I+ + + + PK+ +F + N P+
Sbjct: 135 LYLGNGETVKVEDIIRFIIVQS-GHLEGKPKI-VFSSAPKLNMS--------NPSIPSIH 184
Query: 304 DGAVXXXXXXXXXXXXXXXXXEKPLYSNILIANSTLPGFISHRDVKAGSWYIQVLCEVFA 363
+ P+ +++ A ST+ G+ S R+ + GSW+I + +VF+
Sbjct: 185 HKYAEEEKNEDATGDASHEEVDAPVLQDVIFAYSTVEGYASFRNTQ-GSWFINAIVDVFS 243
Query: 364 ERAHDCHVDELFTLVDKRL--RLRF-GRQTSSVDRWGFNNKLYLHPGLYE 410
+ A + + L T V + +L F G + + KL+L PG +E
Sbjct: 244 KHAWEEDIVSLLTYVSYEVSRKLSFQGYKQIPAPQSTLTKKLFLLPGYFE 293
>SB_19622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 50.4 bits (115), Expect = 3e-06
Identities = 59/271 (21%), Positives = 115/271 (42%), Gaps = 29/271 (10%)
Query: 148 QLYRTRSRKRGVLVVFSYISFLLNIEPNRDGVNVDCDKLKYLFSEIGFEVLTYQNLTLEQ 207
++Y+ S +G+ ++ S IS ++ R D + LK LF IG+ + Q + Q
Sbjct: 610 KVYKMTSNPKGLAIIIS-ISRYDGLKGCRFKSEQDFNNLKNLFEGIGYTIAPLQEI---Q 665
Query: 208 TRATLEQ-----MSSVLAGYECVFLVVSSHGHERRYSSDTDIRCSDGKFISLYAIVDYFN 262
++A LE+ + S+ +E + L V SHG + + +G+ + + I+ +
Sbjct: 666 SKAELEKELKQCVQSIQESHESLILAVMSHG------DERGLYLGNGETVKVEDIIRFII 719
Query: 263 NRKLPNFTDLPKVFIFQACRGENEDFVQGGGALAPAPQVARDGAVXXXXXXXXXXXXXXX 322
+ + PK+ +F + N P+
Sbjct: 720 VQS-GHLEGKPKI-VFSSAPKLNMS--------NPSIPSIHHKYAEEEKNEDATGDASHE 769
Query: 323 XXEKPLYSNILIANSTLPGFISHRDVKAGSWYIQVLCEVFAERAHDCHVDELFTLVDKRL 382
+ P+ +++ A ST+ G+ S R+ + GSW+I + +VF++ A + + L T V +
Sbjct: 770 EVDAPVLQDVIFAYSTVEGYASFRNTQ-GSWFINAIVDVFSKHAWEEDIVSLLTYVSYEV 828
Query: 383 --RLRF-GRQTSSVDRWGFNNKLYLHPGLYE 410
+L F G + + KL+L PG +E
Sbjct: 829 SRKLSFQGYKQIPAPQSTLTKKLFLLPGYFE 859
>SB_30760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1868
Score = 39.1 bits (87), Expect = 0.006
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 1 MQEEHKKAIQRNFSSLVEGTDLDSMVMALYEKGVFSQQMIEPYRDTSITPRERKRILYRE 60
M+E+H++ +++NF L + L+ + + ++ I TP E+ L
Sbjct: 281 MEEKHRQILKKNFVVLRRELPTKQVAACLFSRSILDEEDINLI-SACRTPEEKAETLLDV 339
Query: 61 ITRRGPQAFTMLLEALRE 78
+ R+GP+AF EAL +
Sbjct: 340 LPRKGPKAFQEFYEALNK 357
>SB_58232| Best HMM Match : PI3K_p85B (HMM E-Value=9.1)
Length = 115
Score = 33.9 bits (74), Expect = 0.24
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 10/108 (9%)
Query: 159 VLVVFSYISFLLNIEPNRDGVNVDCDKLKYLFSEIGFEVLTYQNLTLEQTRATLEQMSSV 218
VL F Y + I P+R V V C L + E G++ L Q+ R + S+
Sbjct: 13 VLFTFRYYDIVSMIGPDRSCVAVKC--LGKVLMEFGWKDLKNQDRWNVLDRVPSSSVYSI 70
Query: 219 LAGYECVFLVVSSHGHERRYSSDTDIRCSDGKFISLYAIVD-YFNNRK 265
+ G+ C FL + D DI ++ Y + D Y+NN++
Sbjct: 71 VIGWICEFL-------DECNRQDQDILSEVALYLPKYVLFDPYYNNKR 111
>SB_22562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 33.9 bits (74), Expect = 0.24
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 244 IRCSDGKFISLYAIVDYFNNRKLPNFTDLPKVFIFQACRGENED 287
I +D F+ + I F P PK+F QACRG++ D
Sbjct: 9 ILTNDLNFVDVDEITGKFQGTNCPQLATKPKLFFIQACRGDDVD 52
>SB_30598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 33.1 bits (72), Expect = 0.42
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 20 TDLDSMVMALYEKGVFSQQMIEPYRDTSITPRERKRILYREITRRGPQAFTMLLEALR 77
TD S++++L EKG+ + I+P T T + I++ E T+R Q +EA R
Sbjct: 601 TDCQSLLISLREKGIDASAGIQPGGYTVDTATQLSTIIFTEATKRLSQTDVKNIEAKR 658
>SB_59271| Best HMM Match : LRR_1 (HMM E-Value=0.014)
Length = 897
Score = 31.9 bits (69), Expect = 0.97
Identities = 26/121 (21%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Query: 148 QLYRTRSRKRGVLVVFSYISFLLNIEPNRDGVNVDCDKLKYLFSEIGFEVLTYQNLTLEQ 207
Q Y +S+++G+ ++F S +++ N+ L YLF IG+E+L+ + T++
Sbjct: 671 QTYNMKSKRKGLAMIFKAES---SVKHNKHD-------LDYLFRTIGYEILSSEIDTIQT 720
Query: 208 TRATL----EQMSSVLAGYECVFLVVSSHGHERRYSSDTDIRCSDGKFISLYAIVDYFNN 263
+ EQ+ + + + V L V S R + + S + + L + + N
Sbjct: 721 NESIFSNLEEQLKGIRSSHNSVILAVLSCSDVRDVFLPSGEKVSVERLVGLLCGITHLNG 780
Query: 264 R 264
+
Sbjct: 781 K 781
>SB_56001| Best HMM Match : CARD (HMM E-Value=6.8e-13)
Length = 97
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/70 (20%), Positives = 38/70 (54%)
Query: 9 IQRNFSSLVEGTDLDSMVMALYEKGVFSQQMIEPYRDTSITPRERKRILYREITRRGPQA 68
++RN+ +++ + ++ LY++ +F + ++ R + + +L + +G +
Sbjct: 10 LKRNYLAILRDLEPKKVLNYLYQEEIFDEDELDEVRSERTRKAKAETLLAMLMRGKGLSS 69
Query: 69 FTMLLEALRE 78
+++LLEAL E
Sbjct: 70 YSVLLEALDE 79
>SB_16652| Best HMM Match : I-set (HMM E-Value=1.2e-37)
Length = 552
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 238 YSSDTDIRCSDGKFISLYAIVDYFNNRKLPNFTDLPKVFIFQACRGE 284
Y ++ +RC D LY V N+ P F DL K F+ Q C GE
Sbjct: 439 YEAEVSVRCKD----ELY--VAELKNKDSPQFKDLEKRFLEQKCVGE 479
>SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 4002
Score = 31.1 bits (67), Expect = 1.7
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 224 CVFLVVSSHGHERRYSSDTDIRCSDGKFISLYAIVDYFNNR 264
CVF V +R YSS T + G+FI Y IV FN+R
Sbjct: 3072 CVFPFVYK---KRLYSSCTTVNSKRGRFIKHYTIVGCFNDR 3109
>SB_44582| Best HMM Match : CARD (HMM E-Value=8.7e-21)
Length = 440
Score = 30.7 bits (66), Expect = 2.2
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 1 MQEEHKKAIQRNFSSLVEGTDLDSMVMALYEKGVFSQQMIEPYRDTSITPRERKRILYRE 60
M+EEH+K ++++ L ++ ++ L + S+ E + T +ER L
Sbjct: 11 MKEEHRKILRKHRVELARDLEVHKVLYNL--TSLLSESDEEEIKSFK-TRQERAEELLTM 67
Query: 61 ITRRGPQAFTMLLEAL 76
+T+RG AF + ++AL
Sbjct: 68 LTKRGEHAFEVFVKAL 83
>SB_19521| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 396
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 179 VNVDCDKLKYLFSEIGFEVLTYQNLTLEQTRATLEQMSSVLAGYECVFLVVSSHGHE 235
+N CD L + IGF+V++ NLTL++ L++ +L + HG E
Sbjct: 27 LNDVCD-LAGVLRSIGFKVVSLVNLTLKEMEFALDEFYKLLVKGTYALFYFAGHGFE 82
>SB_1712| Best HMM Match : Peptidase_C14 (HMM E-Value=1.6e-21)
Length = 594
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 179 VNVDCDKLKYLFSEIGFEVLTYQNLTLEQTRATLEQMSSVLAGYECVFLVVSSHGHE 235
+N CD L + IGF+V++ NLTL++ L++ +L + HG E
Sbjct: 71 LNDVCD-LAGVLRSIGFKVVSLVNLTLKEMEFALDEFYKLLVKDTYALFYFAGHGFE 126
>SB_42487| Best HMM Match : Extensin_2 (HMM E-Value=0.084)
Length = 635
Score = 29.5 bits (63), Expect = 5.2
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 50 PRERKRILYREITRRGPQAFTMLLEALREMGHWDLVRDLDPNSPLQLRA-RRPVLPPTR 107
P R ++ I R AFT L + + H + RDL SPL R V PP+R
Sbjct: 410 PAGSNRRVHPSIPRDLTDAFTPLSRGISQTRHPSIPRDLTDASPLHPAGFHRRVTPPSR 468
>SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 29.5 bits (63), Expect = 5.2
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Query: 1 MQEEHKKAIQRNFSSLVEGTDLDSMVMALYEKGVFSQQMIEPYRDTSITPRERK-RILYR 59
M+ KK ++ VE DL+ + + Y K + + D+ R R L
Sbjct: 1 MRFVEKKILEERLQHFVE--DLNPVELLPYLKCLVDTDKEKIECDSRNDGETRATRTLVD 58
Query: 60 EITRRGPQAFTMLLEALREMGHWDLVRDLDP 90
+ +RG +AFT + ALRE G + LDP
Sbjct: 59 RLKKRGNEAFTEFVRALRETGCDHVAMLLDP 89
>SB_22230| Best HMM Match : CARD (HMM E-Value=3.8e-17)
Length = 555
Score = 29.5 bits (63), Expect = 5.2
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 1 MQEEHKKAIQRNFSSLVEGTDLDSMVMALYEKGVFSQQMIEPYRDTSITPRERKRILYRE 60
M H+ A++R S L + DL+ + Y + + + + T +R L
Sbjct: 24 MNNAHRNALRRQRSQLHK--DLEPKKLLPYLASILDETDEQEVKGKG-TREDRCDKLLEI 80
Query: 61 ITRRGPQAFTMLLEALREM 79
+ RRGP AF +EAL+ +
Sbjct: 81 LPRRGPNAFDAFVEALKNV 99
>SB_50496| Best HMM Match : FHA (HMM E-Value=7.8e-07)
Length = 766
Score = 29.1 bits (62), Expect = 6.9
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 3 EEHKKAIQRNFSSLVEGTDLDSMVMALYEKGVFSQQMIEPYRDTSITPRERKRILYRE-- 60
E K +Q N S V G D + L+EK +Q+ +D + +E KRI+
Sbjct: 15 ERLKNMLQENSGSQVHGADTTQATLKLHEKEAKVEQLT---KDWTERWKEAKRIMQESQL 71
Query: 61 -ITRRGPQAFTMLLE 74
++R+G T+ LE
Sbjct: 72 ALSRQGSCVLTVDLE 86
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.138 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,076,064
Number of Sequences: 59808
Number of extensions: 519281
Number of successful extensions: 866
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 842
Number of HSP's gapped (non-prelim): 31
length of query: 410
length of database: 16,821,457
effective HSP length: 84
effective length of query: 326
effective length of database: 11,797,585
effective search space: 3846012710
effective search space used: 3846012710
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)
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