GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002841-TA|BGIBMGA002841-PA|IPR001315|Caspase
Recruitment, IPR002138|Peptidase C14, caspase non-catalytic subunit
p10, IPR001309|Caspase, p20 subunit, IPR011600|Peptidase C14, caspase
catalytic, IPR002398|Peptidase C14, caspase precursor p45,
IPR011029|DEATH-like
         (410 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            27   0.93 
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      26   2.1  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            25   2.8  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 27.1 bits (57), Expect = 0.93
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 164  SYISFLLNIEPNRDGVNVDCDKLKYLFSEIGFEVLTYQNLTLEQTRATL 212
            S +SF + I+P+    ++D D +++    + F    Y   T E  RATL
Sbjct: 1447 SKLSFNITIKPSESHTSIDVDHVRFSPLNLNFRANVYTPDTAE-VRATL 1494


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 25.8 bits (54), Expect = 2.1
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)

Query: 325 EKPLYSNILIANSTLPGFISHRDVK-AGSWYIQVLCEVFAE 364
           E  +Y  +L+ N  + GFI+  D+K  GSW   +L   + E
Sbjct: 299 ETEIYQTVLMRNENILGFIA-ADIKGTGSWTQMLLITDYHE 338


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 25.4 bits (53), Expect = 2.8
 Identities = 11/37 (29%), Positives = 19/37 (51%)

Query: 223 ECVFLVVSSHGHERRYSSDTDIRCSDGKFISLYAIVD 259
           E   L+  +H ++RR      +RCSDG+ +    + D
Sbjct: 799 ETTQLLTFAHANQRRIEDFGRLRCSDGRPLEQMTLSD 835


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.138    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 398,903
Number of Sequences: 2123
Number of extensions: 14752
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 19
Number of HSP's gapped (non-prelim): 3
length of query: 410
length of database: 516,269
effective HSP length: 66
effective length of query: 344
effective length of database: 376,151
effective search space: 129395944
effective search space used: 129395944
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 49 (23.8 bits)