GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002839-TA|BGIBMGA002839-PA|undefined
         (481 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     29   0.28 
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    26   1.9  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   3.4  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   4.5  
AJ973476-1|CAJ01523.1|  126|Anopheles gambiae hypothetical prote...    25   4.5  
AJ697729-1|CAG26922.1|  126|Anopheles gambiae putative sensory a...    25   4.5  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          24   7.9  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   7.9  

>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 29.1 bits (62), Expect = 0.28
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 269 GTSDAEPEPGTSQTVQTESAKTEAAKTDEESSTKQEKIENSVSHSSDADESLVKDSLSTE 328
           GTS A P    + T    +  T+ A T EE++T +E    +   ++  +E+   +  +T 
Sbjct: 125 GTSVASPTTAEASTTTEAATTTQEATTTEEATTTEE--ATTTEKATTTEEATTTEEATTT 182

Query: 329 ME 330
            E
Sbjct: 183 AE 184


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 26.2 bits (55), Expect = 1.9
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 275 PEPGTSQTVQTESAKTEAAKTDEESSTKQEKIENSVSHSSDADESLVKDSLSTEME 330
           PE G+      E  + E A+ DEE + + E  E+  S   + +  LV + L    +
Sbjct: 70  PEDGSPDEEHLEEEQEEEAEADEEEADESESEESEESDELE-EARLVAEELEERQQ 124


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.4 bits (53), Expect = 3.4
 Identities = 28/146 (19%), Positives = 55/146 (37%), Gaps = 9/146 (6%)

Query: 244  AGNQKPNPSPEKTKESKFKKLRTGSGTSDAEPEPGTSQTVQTESAKTEAAKTDEESSTKQ 303
            +G ++ + +P++ K    KK R   G   +      ++  +     +++ + + E S K+
Sbjct: 925  SGGEEGSGAPKERKRKGEKKPRKSQGGGGSRKRKEKAR--RGSGGDSDSEEEEGEGSRKR 982

Query: 304  EKIENSVSHSSDADESLVKDSLSTEMEWXXXXXXXXXXXXXXXXXFDKKRQKLDSGIGEE 363
            +K     S      +  + + LS + +                   D  R K+ SG  +E
Sbjct: 983  KK--KGASGGQKKRQKAMDEGLSQKQKGRILSKATVSTSESDS---DDSRLKIASG--DE 1035

Query: 364  NSPGGSSPEKTEPRSDHSDAVQSDGS 389
            +     +P     R   SD   SDGS
Sbjct: 1036 SGGESGAPATKRKRRIASDEEDSDGS 1061


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 4.5
 Identities = 10/17 (58%), Positives = 13/17 (76%)

Query: 362 EENSPGGSSPEKTEPRS 378
           +E SPGGS+  KT+P S
Sbjct: 170 DELSPGGSARRKTKPNS 186


>AJ973476-1|CAJ01523.1|  126|Anopheles gambiae hypothetical protein
           protein.
          Length = 126

 Score = 25.0 bits (52), Expect = 4.5
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 270 TSDAEPEPGTSQTVQTESAKTEAAKTDEESSTKQEKIEN-SVSHSSDADESLVK 322
           T    P+    + +  ++ KT+ AK  E+  +  EK+ N  + +  D  E+L K
Sbjct: 50  TGRCTPDGNELKRILPDALKTDCAKCSEKQKSGTEKVINYLIDNRKDQWENLQK 103


>AJ697729-1|CAG26922.1|  126|Anopheles gambiae putative sensory
           appendage protein SAP-3 protein.
          Length = 126

 Score = 25.0 bits (52), Expect = 4.5
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 270 TSDAEPEPGTSQTVQTESAKTEAAKTDEESSTKQEKIEN-SVSHSSDADESLVK 322
           T    P+    + +  ++ KT+ AK  E+  +  EK+ N  + +  D  E+L K
Sbjct: 50  TGRCTPDGNELKRILPDALKTDCAKCSEKQKSGTEKVINYLIDNRKDQWENLQK 103


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 24.2 bits (50), Expect = 7.9
 Identities = 8/22 (36%), Positives = 16/22 (72%)

Query: 4   NDNLIQVKRVSPTEWTTKNLLH 25
           NDN+  + R+SP+E  T+ +++
Sbjct: 286 NDNMTDLSRMSPSEMDTQPVMY 307


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.2 bits (50), Expect = 7.9
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)

Query: 3   LNDNLIQVKRVSPTEWTTKNLLHVSFASLKVPTKEESTEHVKLDEL 48
           L   LI++KR       +K+ L ++ + LK+   +E TE  KL+ L
Sbjct: 469 LQTELIELKRAVDE---SKSALSIAESELKICQHDEVTERRKLESL 511


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.305    0.123    0.336 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 344,279
Number of Sequences: 2123
Number of extensions: 10548
Number of successful extensions: 30
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 25
Number of HSP's gapped (non-prelim): 9
length of query: 481
length of database: 516,269
effective HSP length: 67
effective length of query: 414
effective length of database: 374,028
effective search space: 154847592
effective search space used: 154847592
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
S2: 50 (24.2 bits)