GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002839-TA|BGIBMGA002839-PA|undefined
         (481 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    25   1.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   4.3  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   4.3  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   4.3  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)

Query: 111 DLDRESGANEMNALLNLVLSMGQNRV 136
           D+D + G  +  A L+L++  GQN V
Sbjct: 306 DIDDDVGEKKRQAFLDLLIEAGQNGV 331


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 106 LNSLHDLDRESGANEMNALLNL 127
           LN+LHD +  +  NE+ AL +L
Sbjct: 170 LNNLHDPEYSARENELRALSSL 191


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 106 LNSLHDLDRESGANEMNALLNL 127
           LN+LHD +  +  NE+ AL +L
Sbjct: 170 LNNLHDPEYSARENELRALSSL 191


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 106 LNSLHDLDRESGANEMNALLNL 127
           LN+LHD +  +  NE+ AL +L
Sbjct: 170 LNNLHDPEYSARENELRALSSL 191


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.305    0.123    0.336 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,364
Number of Sequences: 429
Number of extensions: 3400
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 481
length of database: 140,377
effective HSP length: 60
effective length of query: 421
effective length of database: 114,637
effective search space: 48262177
effective search space used: 48262177
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
S2: 45 (22.2 bits)