Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002838-TA|BGIBMGA002838-PA|IPR000682|Protein-L-
isoaspartate(D-aspartate) O-methyltransferase
(151 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC869.08 |pcm2||protein-L-isoaspartate O-methyltransferase |Sc... 46 3e-06
SPAC589.08c |dam1||DASH complex subunit Dam1|Schizosaccharomyces... 28 0.70
SPAC3C7.12 |tip1|noc1|CLIP170 family protein Tip1|Schizosaccharo... 27 0.93
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 26 2.1
SPBC336.02 |||18S rRNA dimethylase|Schizosaccharomyces pombe|chr... 25 3.7
SPBC16H5.02 |pfk1||6-phosphofructokinase |Schizosaccharomyces po... 25 6.5
SPCC338.11c |rrg1|uvi22|methyltransferase |Schizosaccharomyces p... 25 6.5
SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyce... 24 8.6
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 24 8.6
>SPAC869.08 |pcm2||protein-L-isoaspartate O-methyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 230
Score = 45.6 bits (103), Expect = 3e-06
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 11 NNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKDLAWRNGSLHMSAPCIYS 70
N L+ +L+ K++ + A R+ Y + + + + + +SAP +++
Sbjct: 10 NAALVQHLVESKFLTNQRAIKAMNATSRSFYCPLSPYMDSPQSIGY---GVTISAPHMHA 66
Query: 71 EVMEALE--LKTGLTFLNVGSGTGYLNTLVGLIIGTSGINHGIEVNSFVVDYSNKKLSHF 128
++ LE L+ G + L++GSG+GYL + ++ +G GIE +V+ S K L
Sbjct: 67 TALQELEPVLQPGCSALDIGSGSGYLVAAMARMVAPNGTVKGIEHIPQLVETSKKNLLKD 126
Query: 129 IENSPTLDE 137
I + L E
Sbjct: 127 INHDEVLME 135
>SPAC589.08c |dam1||DASH complex subunit Dam1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 155
Score = 27.9 bits (59), Expect = 0.70
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 105 SGINHGIEVNSFVVDYSNKKLSHFIENSPTLDEF 138
S +G+++N+F VDY N LS D+F
Sbjct: 69 SSFLYGLQINAFCVDYENAPLSESFLLQAKKDQF 102
>SPAC3C7.12 |tip1|noc1|CLIP170 family protein
Tip1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 27.5 bits (58), Expect = 0.93
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 121 SNKKLSHFIENSPTLDEFDFCEPK 144
+N+KLSH +SPTL F PK
Sbjct: 284 ANEKLSHMESSSPTLTNASFESPK 307
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 2.1
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 14 LIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKD 53
+ N GK+ R A + RA D DY S+ + D + D
Sbjct: 190 IYSNYRNGKFYREARSAAIGRAEDNFDYYSTGMADLSKDD 229
>SPBC336.02 |||18S rRNA dimethylase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 307
Score = 25.4 bits (53), Expect = 3.7
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 44 SEVRDQAYKDLAWRNGSLHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYL 94
+EVR+ +K G + P + +++ +LK T L VG GTG L
Sbjct: 15 AEVRNTVFK-FNKDFGQHILKNPLVAQGIVDKADLKQSDTVLEVGPGTGNL 64
>SPBC16H5.02 |pfk1||6-phosphofructokinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 942
Score = 24.6 bits (51), Expect = 6.5
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 88 GSGTGYLNTLVGLIIGTSGI---NHGIEVNSFVVDYSNKKLSHFIE 130
G +GY+ T+ GLI G S I GI ++ D + K + +E
Sbjct: 758 GGRSGYIATVGGLITGASAIYTPEDGISLDMLRKDIDHLKATFALE 803
>SPCC338.11c |rrg1|uvi22|methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 303
Score = 24.6 bits (51), Expect = 6.5
Identities = 14/69 (20%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 64 SAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGLIIG----TSGINHGIEVNSFVVD 119
SAP + + + + +L + L +G+GTG + + +G + + +E + VD
Sbjct: 119 SAPLLSANLPKWEDLSNSINALELGAGTGLVGISAAIQLGWQVVCTDLPDIVENMQYNVD 178
Query: 120 YSNKKLSHF 128
Y+++ + +
Sbjct: 179 YNSELIQQY 187
>SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 760
Score = 24.2 bits (50), Expect = 8.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 88 GSGTGYLNTLVGLIIGTSGINHGIEVNSFVVD 119
G G L T+ G++ TS + + VN++ D
Sbjct: 175 GENLGSLLTVRGIVTRTSDVKPSLTVNAYTCD 206
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 24.2 bits (50), Expect = 8.6
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 120 YSN-KKLSHFIENSPTLDEFDFCEPKFFCGKSF 151
Y+N KK+S FIE LD +F P SF
Sbjct: 762 YANPKKISDFIEFEQELDLNEFVMPHLRASSSF 794
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.136 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 708,338
Number of Sequences: 5004
Number of extensions: 27664
Number of successful extensions: 67
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 61
Number of HSP's gapped (non-prelim): 9
length of query: 151
length of database: 2,362,478
effective HSP length: 67
effective length of query: 84
effective length of database: 2,027,210
effective search space: 170285640
effective search space used: 170285640
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 50 (24.2 bits)
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