BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002838-TA|BGIBMGA002838-PA|IPR000682|Protein-L-
isoaspartate(D-aspartate) O-methyltransferase
(151 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032670-1|AAH32670.1| 357|Homo sapiens protein-L-isoaspartate ... 212 4e-55
AK056952-1|BAB71324.1| 357|Homo sapiens protein ( Homo sapiens ... 212 4e-55
BC040945-1|AAH40945.1| 334|Homo sapiens PCMTD2 protein protein. 210 1e-54
BC033665-1|AAH33665.1| 361|Homo sapiens protein-L-isoaspartate ... 210 1e-54
BC032332-1|AAH32332.1| 282|Homo sapiens Unknown (protein for MG... 210 1e-54
AL121581-4|CAC17006.1| 361|Homo sapiens protein-L-isoaspartate ... 210 1e-54
AK001745-1|BAA91877.1| 361|Homo sapiens protein ( Homo sapiens ... 210 1e-54
BC008748-1|AAH08748.1| 227|Homo sapiens protein-L-isoaspartate ... 49 8e-06
M93008-1|AAA90934.1| 228|Homo sapiens L-isoaspartyl/D-aspartyl ... 48 1e-05
D25547-1|BAA05030.1| 227|Homo sapiens PIMT isozyme I protein. 48 1e-05
D25546-1|BAA05029.1| 228|Homo sapiens PIMT isozyme II protein. 48 1e-05
D25545-1|BAA05028.1| 227|Homo sapiens PIMT isozyme I protein. 48 1e-05
D13892-1|BAA02991.1| 228|Homo sapiens carboxyl methyltransferas... 48 1e-05
BC007501-1|AAH07501.1| 228|Homo sapiens PCMT1 protein protein. 48 1e-05
AL355312-3|CAH72863.1| 228|Homo sapiens protein-L-isoaspartate ... 48 1e-05
AL355312-2|CAH72862.1| 227|Homo sapiens protein-L-isoaspartate ... 48 1e-05
BX640885-1|CAE45939.1| 244|Homo sapiens hypothetical protein pr... 45 1e-04
BC045775-1|AAH45775.1| 261|Homo sapiens PCMTD2 protein protein. 44 3e-04
>BC032670-1|AAH32670.1| 357|Homo sapiens protein-L-isoaspartate
(D-aspartate) O-methyltransferase domain containing 1
protein.
Length = 357
Score = 212 bits (518), Expect = 4e-55
Identities = 94/148 (63%), Positives = 121/148 (81%)
Query: 1 MGGAVSSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKDLAWRNGS 60
MGGAVS+G DN++LIDNL +YIR+ VE FRA+DR DY RD AYKDLAW++G+
Sbjct: 1 MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGN 60
Query: 61 LHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGLIIGTSGINHGIEVNSFVVDY 120
+H+SAPCIYSEVMEAL+L+ GL+FLN+GSGTGYL+T+VGLI+G GINHGIE++S VV+Y
Sbjct: 61 IHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEY 120
Query: 121 SNKKLSHFIENSPTLDEFDFCEPKFFCG 148
+ +KL FI+NS + D+F+FCEP F G
Sbjct: 121 AKEKLESFIKNSDSFDKFEFCEPAFVVG 148
>AK056952-1|BAB71324.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ32390 fis, clone SKMUS1000177, weakly similar to
PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE (EC
2.1.1.77). ).
Length = 357
Score = 212 bits (518), Expect = 4e-55
Identities = 94/148 (63%), Positives = 121/148 (81%)
Query: 1 MGGAVSSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKDLAWRNGS 60
MGGAVS+G DN++LIDNL +YIR+ VE FRA+DR DY RD AYKDLAW++G+
Sbjct: 1 MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGN 60
Query: 61 LHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGLIIGTSGINHGIEVNSFVVDY 120
+H+SAPCIYSEVMEAL+L+ GL+FLN+GSGTGYL+T+VGLI+G GINHGIE++S VV+Y
Sbjct: 61 IHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEY 120
Query: 121 SNKKLSHFIENSPTLDEFDFCEPKFFCG 148
+ +KL FI+NS + D+F+FCEP F G
Sbjct: 121 AKEKLESFIKNSDSFDKFEFCEPAFVVG 148
>BC040945-1|AAH40945.1| 334|Homo sapiens PCMTD2 protein protein.
Length = 334
Score = 210 bits (514), Expect = 1e-54
Identities = 91/148 (61%), Positives = 121/148 (81%)
Query: 1 MGGAVSSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKDLAWRNGS 60
MGGAVS+G DN+ELIDNL +YIR+ VE FRA+DRADY E ++ AYKDLAW++G+
Sbjct: 1 MGGAVSAGEDNDELIDNLKEAQYIRTELVEQAFRAIDRADYYLEEFKENAYKDLAWKHGN 60
Query: 61 LHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGLIIGTSGINHGIEVNSFVVDY 120
+H+SAPCIYSEVMEAL+L+ GL+FLN+GSGTGYL+++VGLI+G G+NHG+E++S V++Y
Sbjct: 61 IHLSAPCIYSEVMEALDLQPGLSFLNLGSGTGYLSSMVGLILGPFGVNHGVELHSDVIEY 120
Query: 121 SNKKLSHFIENSPTLDEFDFCEPKFFCG 148
+ +KL FI S + D+FDFCEP F G
Sbjct: 121 AKQKLDFFIRTSDSFDKFDFCEPSFVTG 148
>BC033665-1|AAH33665.1| 361|Homo sapiens protein-L-isoaspartate
(D-aspartate) O-methyltransferase domain containing 2
protein.
Length = 361
Score = 210 bits (514), Expect = 1e-54
Identities = 91/148 (61%), Positives = 121/148 (81%)
Query: 1 MGGAVSSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKDLAWRNGS 60
MGGAVS+G DN+ELIDNL +YIR+ VE FRA+DRADY E ++ AYKDLAW++G+
Sbjct: 1 MGGAVSAGEDNDELIDNLKEAQYIRTELVEQAFRAIDRADYYLEEFKENAYKDLAWKHGN 60
Query: 61 LHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGLIIGTSGINHGIEVNSFVVDY 120
+H+SAPCIYSEVMEAL+L+ GL+FLN+GSGTGYL+++VGLI+G G+NHG+E++S V++Y
Sbjct: 61 IHLSAPCIYSEVMEALDLQPGLSFLNLGSGTGYLSSMVGLILGPFGVNHGVELHSDVIEY 120
Query: 121 SNKKLSHFIENSPTLDEFDFCEPKFFCG 148
+ +KL FI S + D+FDFCEP F G
Sbjct: 121 AKQKLDFFIRTSDSFDKFDFCEPSFVTG 148
>BC032332-1|AAH32332.1| 282|Homo sapiens Unknown (protein for
MGC:40288) protein.
Length = 282
Score = 210 bits (514), Expect = 1e-54
Identities = 91/148 (61%), Positives = 121/148 (81%)
Query: 1 MGGAVSSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKDLAWRNGS 60
MGGAVS+G DN+ELIDNL +YIR+ VE FRA+DRADY E ++ AYKDLAW++G+
Sbjct: 1 MGGAVSAGEDNDELIDNLKEAQYIRTELVEQAFRAIDRADYYLEEFKENAYKDLAWKHGN 60
Query: 61 LHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGLIIGTSGINHGIEVNSFVVDY 120
+H+SAPCIYSEVMEAL+L+ GL+FLN+GSGTGYL+++VGLI+G G+NHG+E++S V++Y
Sbjct: 61 IHLSAPCIYSEVMEALDLQPGLSFLNLGSGTGYLSSMVGLILGPFGVNHGVELHSDVIEY 120
Query: 121 SNKKLSHFIENSPTLDEFDFCEPKFFCG 148
+ +KL FI S + D+FDFCEP F G
Sbjct: 121 AKQKLDFFIRTSDSFDKFDFCEPSFVTG 148
>AL121581-4|CAC17006.1| 361|Homo sapiens protein-L-isoaspartate
(D-aspartate) O-methyltransferase domain containing 2
protein.
Length = 361
Score = 210 bits (514), Expect = 1e-54
Identities = 91/148 (61%), Positives = 121/148 (81%)
Query: 1 MGGAVSSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKDLAWRNGS 60
MGGAVS+G DN+ELIDNL +YIR+ VE FRA+DRADY E ++ AYKDLAW++G+
Sbjct: 1 MGGAVSAGEDNDELIDNLKEAQYIRTELVEQAFRAIDRADYYLEEFKENAYKDLAWKHGN 60
Query: 61 LHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGLIIGTSGINHGIEVNSFVVDY 120
+H+SAPCIYSEVMEAL+L+ GL+FLN+GSGTGYL+++VGLI+G G+NHG+E++S V++Y
Sbjct: 61 IHLSAPCIYSEVMEALDLQPGLSFLNLGSGTGYLSSMVGLILGPFGVNHGVELHSDVIEY 120
Query: 121 SNKKLSHFIENSPTLDEFDFCEPKFFCG 148
+ +KL FI S + D+FDFCEP F G
Sbjct: 121 AKQKLDFFIRTSDSFDKFDFCEPSFVTG 148
>AK001745-1|BAA91877.1| 361|Homo sapiens protein ( Homo sapiens
cDNA FLJ10883 fis, clone NT2RP4001946, weakly similar to
PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE (EC
2.1.1.77). ).
Length = 361
Score = 210 bits (513), Expect = 1e-54
Identities = 91/148 (61%), Positives = 120/148 (81%)
Query: 1 MGGAVSSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKDLAWRNGS 60
MGGAVS+G DN ELIDNL +YIR+ VE FRA+DRADY E ++ AYKDLAW++G+
Sbjct: 1 MGGAVSAGEDNEELIDNLKEAQYIRTELVEQAFRAIDRADYYLEEFKENAYKDLAWKHGN 60
Query: 61 LHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGLIIGTSGINHGIEVNSFVVDY 120
+H+SAPCIYSEVMEAL+L+ GL+FLN+GSGTGYL+++VGLI+G G+NHG+E++S V++Y
Sbjct: 61 IHLSAPCIYSEVMEALDLQPGLSFLNLGSGTGYLSSMVGLILGPFGVNHGVELHSDVIEY 120
Query: 121 SNKKLSHFIENSPTLDEFDFCEPKFFCG 148
+ +KL FI S + D+FDFCEP F G
Sbjct: 121 AKQKLDFFIRTSDSFDKFDFCEPSFVTG 148
>BC008748-1|AAH08748.1| 227|Homo sapiens protein-L-isoaspartate
(D-aspartate) O-methyltransferase protein.
Length = 227
Score = 48.8 bits (111), Expect = 8e-06
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Query: 6 SSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKDLAWRNG-SLHMS 64
S G ++ELI NL + I++ +V V A DR+ Y + Y D G +S
Sbjct: 5 SGGASHSELIHNLRKNGIIKTDKVFEVMLATDRSHY----AKCNPYMDSPQSIGFQATIS 60
Query: 65 APCIYSEVMEAL--ELKTGLTFLNVGSGTGYLNTLVGLIIGTSGINHGIEVNSFVVDYSN 122
AP +++ +E L +L G L+VGSG+G L ++G +G GI+ +VD S
Sbjct: 61 APHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDS- 119
Query: 123 KKLSHFIENSPTL 135
+++ ++ PTL
Sbjct: 120 --INNVRKDDPTL 130
>M93008-1|AAA90934.1| 228|Homo sapiens L-isoaspartyl/D-aspartyl
protein carboxyl methyltransferase protein.
Length = 228
Score = 48.4 bits (110), Expect = 1e-05
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Query: 6 SSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKDLAWRNG-SLHMS 64
S G ++ELI NL + I++ +V V A DR+ Y + Y D G +S
Sbjct: 5 SGGASHSELIHNLRKNGIIKTDKVFEVMLATDRSHY----AKCNPYMDSPQSIGFQATIS 60
Query: 65 APCIYSEVMEAL--ELKTGLTFLNVGSGTGYLNTLVGLIIGTSGINHGIEVNSFVVDYSN 122
AP +++ +E L +L G L+VGSG+G L ++G +G GI+ +VD S
Sbjct: 61 APHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDS- 119
Query: 123 KKLSHFIENSPTL 135
+++ ++ PTL
Sbjct: 120 --VNNVRKDDPTL 130
>D25547-1|BAA05030.1| 227|Homo sapiens PIMT isozyme I protein.
Length = 227
Score = 48.4 bits (110), Expect = 1e-05
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Query: 6 SSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKDLAWRNG-SLHMS 64
S G ++ELI NL + I++ +V V A DR+ Y + Y D G +S
Sbjct: 5 SGGASHSELIHNLRKNGIIKTDKVFEVMLATDRSHY----AKCNPYMDSPQSIGFQATIS 60
Query: 65 APCIYSEVMEAL--ELKTGLTFLNVGSGTGYLNTLVGLIIGTSGINHGIEVNSFVVDYSN 122
AP +++ +E L +L G L+VGSG+G L ++G +G GI+ +VD S
Sbjct: 61 APHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDS- 119
Query: 123 KKLSHFIENSPTL 135
+++ ++ PTL
Sbjct: 120 --VNNVRKDDPTL 130
>D25546-1|BAA05029.1| 228|Homo sapiens PIMT isozyme II protein.
Length = 228
Score = 48.4 bits (110), Expect = 1e-05
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Query: 6 SSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKDLAWRNG-SLHMS 64
S G ++ELI NL + I++ +V V A DR+ Y + Y D G +S
Sbjct: 5 SGGASHSELIHNLRKNGIIKTDKVFEVMLATDRSHY----AKCNPYMDSPQSIGFQATIS 60
Query: 65 APCIYSEVMEAL--ELKTGLTFLNVGSGTGYLNTLVGLIIGTSGINHGIEVNSFVVDYSN 122
AP +++ +E L +L G L+VGSG+G L ++G +G GI+ +VD S
Sbjct: 61 APHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDS- 119
Query: 123 KKLSHFIENSPTL 135
+++ ++ PTL
Sbjct: 120 --VNNVRKDDPTL 130
>D25545-1|BAA05028.1| 227|Homo sapiens PIMT isozyme I protein.
Length = 227
Score = 48.4 bits (110), Expect = 1e-05
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Query: 6 SSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKDLAWRNG-SLHMS 64
S G ++ELI NL + I++ +V V A DR+ Y + Y D G +S
Sbjct: 5 SGGASHSELIHNLRKNGIIKTDKVFEVMLATDRSHY----AKCNPYMDSPQSIGFQATIS 60
Query: 65 APCIYSEVMEAL--ELKTGLTFLNVGSGTGYLNTLVGLIIGTSGINHGIEVNSFVVDYSN 122
AP +++ +E L +L G L+VGSG+G L ++G +G GI+ +VD S
Sbjct: 61 APHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDS- 119
Query: 123 KKLSHFIENSPTL 135
+++ ++ PTL
Sbjct: 120 --VNNVRKDDPTL 130
>D13892-1|BAA02991.1| 228|Homo sapiens carboxyl methyltransferase
protein.
Length = 228
Score = 48.4 bits (110), Expect = 1e-05
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Query: 6 SSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKDLAWRNG-SLHMS 64
S G ++ELI NL + I++ +V V A DR+ Y + Y D G +S
Sbjct: 5 SGGASHSELIHNLRKNGIIKTDKVFEVMLATDRSHY----AKCNPYMDSPQSIGFQATIS 60
Query: 65 APCIYSEVMEAL--ELKTGLTFLNVGSGTGYLNTLVGLIIGTSGINHGIEVNSFVVDYSN 122
AP +++ +E L +L G L+VGSG+G L ++G +G GI+ +VD S
Sbjct: 61 APHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDS- 119
Query: 123 KKLSHFIENSPTL 135
+++ ++ PTL
Sbjct: 120 --VNNVRKDDPTL 130
>BC007501-1|AAH07501.1| 228|Homo sapiens PCMT1 protein protein.
Length = 228
Score = 48.4 bits (110), Expect = 1e-05
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Query: 6 SSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKDLAWRNG-SLHMS 64
S G ++ELI NL + I++ +V V A DR+ Y + Y D G +S
Sbjct: 5 SGGASHSELIHNLRKNGIIKTDKVFEVMLATDRSHY----AKCNPYMDSPQSIGFQATIS 60
Query: 65 APCIYSEVMEAL--ELKTGLTFLNVGSGTGYLNTLVGLIIGTSGINHGIEVNSFVVDYSN 122
AP +++ +E L +L G L+VGSG+G L ++G +G GI+ +VD S
Sbjct: 61 APHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDS- 119
Query: 123 KKLSHFIENSPTL 135
+++ ++ PTL
Sbjct: 120 --VNNVRKDDPTL 130
>AL355312-3|CAH72863.1| 228|Homo sapiens protein-L-isoaspartate
(D-aspartate) O-methyltransferase protein.
Length = 228
Score = 48.4 bits (110), Expect = 1e-05
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Query: 6 SSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKDLAWRNG-SLHMS 64
S G ++ELI NL + I++ +V V A DR+ Y + Y D G +S
Sbjct: 5 SGGASHSELIHNLRKNGIIKTDKVFEVMLATDRSHY----AKCNPYMDSPQSIGFQATIS 60
Query: 65 APCIYSEVMEAL--ELKTGLTFLNVGSGTGYLNTLVGLIIGTSGINHGIEVNSFVVDYSN 122
AP +++ +E L +L G L+VGSG+G L ++G +G GI+ +VD S
Sbjct: 61 APHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDS- 119
Query: 123 KKLSHFIENSPTL 135
+++ ++ PTL
Sbjct: 120 --VNNVRKDDPTL 130
>AL355312-2|CAH72862.1| 227|Homo sapiens protein-L-isoaspartate
(D-aspartate) O-methyltransferase protein.
Length = 227
Score = 48.4 bits (110), Expect = 1e-05
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Query: 6 SSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKDLAWRNG-SLHMS 64
S G ++ELI NL + I++ +V V A DR+ Y + Y D G +S
Sbjct: 5 SGGASHSELIHNLRKNGIIKTDKVFEVMLATDRSHY----AKCNPYMDSPQSIGFQATIS 60
Query: 65 APCIYSEVMEAL--ELKTGLTFLNVGSGTGYLNTLVGLIIGTSGINHGIEVNSFVVDYSN 122
AP +++ +E L +L G L+VGSG+G L ++G +G GI+ +VD S
Sbjct: 61 APHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDS- 119
Query: 123 KKLSHFIENSPTL 135
+++ ++ PTL
Sbjct: 120 --VNNVRKDDPTL 130
>BX640885-1|CAE45939.1| 244|Homo sapiens hypothetical protein
protein.
Length = 244
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 114 NSFVVDYSNKKLSHFIENSPTLDEFDFCEPKFFCG 148
+S VV+Y+ +KL FI+NS + D+F+FCEP F G
Sbjct: 1 HSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVG 35
>BC045775-1|AAH45775.1| 261|Homo sapiens PCMTD2 protein protein.
Length = 261
Score = 43.6 bits (98), Expect = 3e-04
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 114 NSFVVDYSNKKLSHFIENSPTLDEFDFCEPKFFCG 148
+S V++Y+ +KL FI S + D+FDFCEP F G
Sbjct: 14 HSDVIEYAKQKLDFFIRTSDSFDKFDFCEPSFVTG 48
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.319 0.136 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,391,718
Number of Sequences: 224733
Number of extensions: 784049
Number of successful extensions: 1354
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1327
Number of HSP's gapped (non-prelim): 18
length of query: 151
length of database: 73,234,838
effective HSP length: 84
effective length of query: 67
effective length of database: 54,357,266
effective search space: 3641936822
effective search space used: 3641936822
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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