Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002833-TA|BGIBMGA002833-PA|undefined
(1007 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 37 0.012
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.20
SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces... 33 0.26
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 31 0.61
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 31 1.1
SPAC18G6.15 |mal3||EB1 family Mal3|Schizosaccharomyces pombe|chr... 30 1.4
SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|c... 30 1.4
SPBC3B9.11c |ctf1||mRNA cleavage and polyadenylation specificity... 30 1.9
SPAPB1E7.11c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 29 2.5
SPAC23C11.17 |||mitochondrial inner membrane protein involved in... 29 2.5
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 29 3.2
SPBC409.09c |mis13|cnl1|kinetochore protein Mis13|Schizosaccharo... 29 3.2
SPBC19G7.18c ||SPBC19G7.11c|sequence orphan|Schizosaccharomyces ... 29 3.2
SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr... 29 4.3
SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pomb... 29 4.3
SPAC6G10.08 |idp1||isocitrate dehydrogenase Idp1|Schizosaccharom... 29 4.3
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 29 4.3
SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat protei... 29 4.3
SPBC1604.09c |||exoribonuclease Rex4 |Schizosaccharomyces pombe|... 29 4.3
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 29 4.3
SPAC17A2.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 28 5.7
SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat protein|Schizo... 28 5.7
SPCC1020.10 |oca2||serine/threonine protein kinase Oca2 |Schizos... 28 5.7
SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster ... 28 5.7
SPBP23A10.14c |ell1||RNA polymerase II transcription elongation ... 28 5.7
SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pomb... 28 5.7
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 28 5.7
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 28 7.5
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 28 7.5
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 28 7.5
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 28 7.5
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 27 9.9
SPAC664.01c |swi6|SPAC824.10c|chromodomain protein Swi6|Schizosa... 27 9.9
SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|c... 27 9.9
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 27 9.9
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 27 9.9
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 89 QVPSSSKHQIEQSVQGQYNESEAKVLYKTSENNFPSSDPSDQTPKSQDHDDNNRCTE 145
Q P S+ +I + + +Y+++E+ ++ + P S+P DQ S+ D+N E
Sbjct: 351 QKPGKSQGEISEQEEDEYDDAESDEMHSPYSTHEPESEPEDQDEPSEKDDENKDVEE 407
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 33.1 bits (72), Expect = 0.20
Identities = 29/149 (19%), Positives = 54/149 (36%), Gaps = 3/149 (2%)
Query: 65 TRHCQDISYLENISKPSSNVTELKQVPSSSKHQIEQSVQGQYNESEAKVLYKTSENNFPS 124
TR + S PSS+ + PSSS + S + + S + +S ++ S
Sbjct: 139 TRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKS 198
Query: 125 SDPSDQTPKSQDHDDNNRCTEVSRVDSXXXXXXXXXXXXXXXVVPDESVLRSHKTKSALE 184
S S + KS +++ + S +V + + + SA
Sbjct: 199 SSSSSSSSKSSASPSSSKSSSKFSSSSFITSTTPASSSSSGAIVSNAKTASTDDSSSASS 258
Query: 185 NVVATNSTDSYESTAGHRMAQRAHAGDCN 213
AT+S S S+A ++ A + +
Sbjct: 259 ---ATSSVSSVVSSASSALSASASSASAS 284
>SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 745
Score = 32.7 bits (71), Expect = 0.26
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 311 NRSKYKRHIDLSDMRSICDTRLYSSNKAKIKTRRRYMEAQNDSELYDLIP--VKEKSSPK 368
++SK + ID + + +R SS K+ R + ND L DL P EKS+P
Sbjct: 615 SKSKAQNAIDFNVTNTHSPSRSISSEKSYKAAERGQQDKHNDV-LVDLNPNVEAEKSNPH 673
Query: 369 SR-RKFAED----NIRYHYYKEVPPSPRTHRPQLNLKAQHYEDYFYH 410
S +K +++ N R Y KE+ T PQ L Q+ E H
Sbjct: 674 SNSQKTSKNDMSRNQRNKYAKEIMTGQPTLHPQGQLPIQNVEQRATH 720
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 75 ENISKPSSNVTELKQVPSSSKHQIEQSVQGQYNESEAKVLYKTSENNFPSSDPSDQTPKS 134
E+ S S + + + SSS S + +ESE +V+ KT E SS+ S +
Sbjct: 88 ESESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKESSSESSSSSESE 147
Query: 135 QDHD 138
++ +
Sbjct: 148 EEEE 151
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 30.7 bits (66), Expect = 1.1
Identities = 28/149 (18%), Positives = 55/149 (36%), Gaps = 3/149 (2%)
Query: 415 SRSPNRHERNVKEIFESDLSSETPQAIESGRRQMKTTNMANAPEHPRNESGTLNSRPNTY 474
S + + + N + S S TP S T+ ++ P N + T ++
Sbjct: 268 SATSSSAQYNTSSLLPSSTPSSTPL---SSANSTTATSASSTPLTSVNSTTTTSASSTPL 324
Query: 475 IEDQTCHETHLNKTQDTDMSTDKTDRALCEIKDILQSFLQEIKKEATVSQCEKSDVTSKA 534
+ + T T T +S+ + A L S A+ + + TS
Sbjct: 325 SSVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSAT 384
Query: 535 AGNVPNNIQLNSTNASMLPNSGPSFNYSN 563
+ + NST ++ + ++ PS+N S+
Sbjct: 385 SASSTPLTSANSTTSTSVSSTAPSYNTSS 413
>SPAC18G6.15 |mal3||EB1 family Mal3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 308
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 113 VLYKTSEN-NFPSSDPSDQTPKSQDHDDNNRCTEVSRVD 150
+LY T + P P+D T DHD NN E D
Sbjct: 237 ILYSTEDGFELPPDQPADLTTALTDHDTNNVAEEAQMTD 275
>SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 355
Score = 30.3 bits (65), Expect = 1.4
Identities = 47/267 (17%), Positives = 105/267 (39%), Gaps = 14/267 (5%)
Query: 193 DSYESTAGHRMAQRAHAGDCNRQHHRANIDHAYKGRSESLHERKEKGHHRQKIMNNNRDL 252
DS +S +M + R + N+ + K R L +E+ ++ + + D
Sbjct: 74 DSMKSAEREQMELKRLESKDRRPKYMENLIESAKKRKRDLLLARERALLKKNELEGD-DA 132
Query: 253 DNEFIADIIRRQYKPVK--LFGRKESDFSQLSAPVCRDQEYSYNNYFGDCSELCSCCYDS 310
+F+ ++ + V+ + RKE D ++ +++ Y + ++ +
Sbjct: 133 TEKFVTSSYKKHREEVQKAIEDRKEEDEKSITDTTTGMKDF-YASMLDRQEKIHQAAVEG 191
Query: 311 NRSKYKRHIDLSDMRSICDTRLYSSNKAKIKTRRRYMEAQNDSELYDL-------IPVKE 363
++ K ++ D DT + + K + +E +++E+ D + +++
Sbjct: 192 VQNSKKTGAEIGDAMKGQDTLGSDNLILEAKKKGLKLELNDNNEIVDQRQILTAGLNIRK 251
Query: 364 KSSPKSRRKFAEDNIRYHYYKEVPPSPRTHRPQLNLKAQHYEDYFYHHQRKSRSPNRHER 423
S+ S R + N + Y + + PS R H+ + + + Y QRK NR
Sbjct: 252 SSANNSMRDDKKRNHKSSYKRSLSPSTRYHQDRPDKRHGTYSLEEIDKQRK-EFENRQRL 310
Query: 424 NVKEIFESDLSSETPQAIESGRRQMKT 450
++ F+ S E I + R +T
Sbjct: 311 QKEKEFQK--SREAALKIHASRNTTET 335
>SPBC3B9.11c |ctf1||mRNA cleavage and polyadenylation specificity
factor complex subunit Ctf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 363
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 427 EIFESDLSSETPQAI---ESGRRQMKTTNMANAPEHPRNESGTLNSRPNTYIEDQTCHET 483
E F+S+ ++ + + E G R+++ +N P RN+S R + Y+E Q HE+
Sbjct: 54 EFFDSETTAMAVRKLNNSELGPRKIRVEFPSNDPR--RNQSYEYTERTDRYMEQQNAHES 111
Query: 484 HLN 486
N
Sbjct: 112 SYN 114
>SPAPB1E7.11c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 319
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 356 YDLIPVKEKSSPKSRRKFAEDNIRYHYYKEVPPSPRTHRPQLNLKAQ 402
Y I KE SR + + + H Y E+ P +T P++N+K++
Sbjct: 271 YKKITKKENIGLSSRDEMGDPLLFAHSYFELTPENKTSAPKINVKSE 317
>SPAC23C11.17 |||mitochondrial inner membrane protein involved in
potassium ion transport|Schizosaccharomyces pombe|chr
1|||Manual
Length = 485
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 624 ETEELIKEIYKHVLETPGSRKKETSRDENK 653
E EELI+E +HV E P KK+T +ENK
Sbjct: 436 EQEELIEEEAEHVAEHPDLAKKQT--EENK 463
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/123 (17%), Positives = 50/123 (40%), Gaps = 1/123 (0%)
Query: 78 SKPSSNVTELKQVPSSSKHQIEQSVQGQYNESEAKVLYKTSENNFPSSDPSDQTPKSQDH 137
SKP+S+ V S+ ++ +S + ++ ++ + K S+ PS S P S +
Sbjct: 136 SKPTSHAPVSDNVSSTFRNATRKSKKPSASKDTSRGVRK-SKAGAPSDPSSVHAPSSLEK 194
Query: 138 DDNNRCTEVSRVDSXXXXXXXXXXXXXXXVVPDESVLRSHKTKSALENVVATNSTDSYES 197
S + + + ++S ++ H T + +V+ + +T + +
Sbjct: 195 PAGTGDLPSSEISTKAPASTTVSSSVDPGTINEDSSMKDHTTSNEQASVLTSANTAASTN 254
Query: 198 TAG 200
T G
Sbjct: 255 TNG 257
>SPBC409.09c |mis13|cnl1|kinetochore protein
Mis13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 329
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 314 KYKRHI--DLSDMRSICDTRLYSSNKAKIKTRRRYMEAQNDSE 354
+Y RHI DLS+ I L++S+KA + R++Y E + SE
Sbjct: 95 EYYRHISKDLSEPLRIKQLLLWASSKALEEQRKKYGETEEASE 137
>SPBC19G7.18c ||SPBC19G7.11c|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 252
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 87 LKQVPSSSKHQIEQSVQGQYNESEAKVLYKTSENNFPSSDPSDQTPKSQDHDDNNRCTE 145
L+++ S Q QG++ S ++ K S+ P S P+ SQD N++ TE
Sbjct: 97 LRKIQDSLIRQRTTMRQGRFPSSSSEFPPKNSKYQLPGSMPNTGASSSQDPFTNSQSTE 155
>SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 568
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 62 NEATRHCQDISYLENISKPS-SNVTELKQVPSSSKHQIEQSVQGQYNESEAKVLYKTSEN 120
+E C DI LEN K ++ KQ+ + + + S+ + NE+E L + SE+
Sbjct: 418 DEVKSICGDI--LENRWKSLLQEISSQKQLSTDASQTQDASIANE-NETEIASLDEGSES 474
Query: 121 NFPSSDPSDQTPKSQDHDDN 140
S P++Q + ++DN
Sbjct: 475 KPTPSPPAEQLTDQKQNEDN 494
>SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1328
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 167 VVPDESVLRSHKTKSALENVVATNSTDSYESTAGHRMAQRAHAGDCNRQH 216
V P ES++ K+K + N +TN T S G R + + + NR+H
Sbjct: 1267 VPPPESLIHKSKSKFSKGNHHSTNGTQSIRGRGGKR-GKPLRSKELNRKH 1315
>SPAC6G10.08 |idp1||isocitrate dehydrogenase
Idp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 418
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/14 (71%), Positives = 11/14 (78%)
Query: 566 NIPPYIPAFTNPCC 579
NIP YIP +TNP C
Sbjct: 126 NIPKYIPGWTNPIC 139
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 4.3
Identities = 25/122 (20%), Positives = 49/122 (40%)
Query: 412 QRKSRSPNRHERNVKEIFESDLSSETPQAIESGRRQMKTTNMANAPEHPRNESGTLNSRP 471
+R+ + H ++++E +E S ++ M+ N + NE+ L +
Sbjct: 368 KREKERLSEHLKSLQEQYEHIQSVYKNVLLDRESYIMRLGNKISENNELLNENRVLKEKL 427
Query: 472 NTYIEDQTCHETHLNKTQDTDMSTDKTDRALCEIKDILQSFLQEIKKEATVSQCEKSDVT 531
TY++ + + T K+ + S + E KD L + L E K A + T
Sbjct: 428 QTYLDKKESNVTSKIKSTAENSSKPLSMNEADERKDGLNNLLFENKSGANTKEMSNGTET 487
Query: 532 SK 533
+K
Sbjct: 488 AK 489
>SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 945
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 364 KSSPKSRRKFAEDNIRYHYYKEVPPSPRTHRPQLNLKAQHYEDYFYHHQRKSRSPNRHER 423
+SSP SR + N H+Y T QLN HY + H ++S H
Sbjct: 361 QSSPSSRMSM-DSNFEQHWYDAEDYESTTS--QLN----HYSESGAHAADATKSSVAHNE 413
Query: 424 NVKEIFESDL 433
V++I +SD+
Sbjct: 414 KVEDISDSDI 423
>SPBC1604.09c |||exoribonuclease Rex4 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 260
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 213 NRQHHRANIDHAYKGRSESLHERKEKGHHRQKIMNNNRDLDNEFIADIIRRQYKPVKLFG 272
N + + +D A GR E H ++K + + + N + +N +I D +++ +K F
Sbjct: 5 NWEKLKKKLDSAKSGRVEKKHSNEKK--YLKSVKGKNNENENSYIVD--KKRMNELKKFA 60
Query: 273 RKESDFSQ 280
KE+D +
Sbjct: 61 -KENDIPE 67
>SPBC3F6.05 |rga1||GTPase activating protein
Rga1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1150
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/68 (26%), Positives = 29/68 (42%)
Query: 412 QRKSRSPNRHERNVKEIFESDLSSETPQAIESGRRQMKTTNMANAPEHPRNESGTLNSRP 471
QRK S + + NV E+ +ET + +S R+ T N + RN T N
Sbjct: 587 QRKPLSVDPKQENVSSTVETAKQAETTASSDSFRKYANTLNDLRHLKSSRNRKATSNETQ 646
Query: 472 NTYIEDQT 479
++ +T
Sbjct: 647 SSSNSTET 654
>SPAC17A2.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 177
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 251 DLDNEFIADIIRRQYKPVKLFGRKESDFSQLSAPVCRDQEYSYNNY 296
D + I +II R K + + E D S + P C+ Y N Y
Sbjct: 13 DYSTKRILEIIERPLKKLTIEDTSEYDDSDIEMPTCKRVAYYKNEY 58
>SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 509
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 84 VTELKQVPSSSKHQIEQSVQGQYNESEAKVLYKTS--ENNFPSSDPSD 129
VT+++++ ++ K++++ Q + E K+LYK++ + PS SD
Sbjct: 18 VTKIRKLTAAKKNELQNRKCNQASNEEKKILYKSNFLDRFIPSKANSD 65
>SPCC1020.10 |oca2||serine/threonine protein kinase Oca2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 210 GDCNRQHHRANIDHAYKGRSESLHERKE--KGHHRQKIMNNNRDLDNEFI 257
G N QHHR+ I AY + + + + + R I N D+ ++FI
Sbjct: 166 GSFNTQHHRSPIFQAYPSSEDLVGDPNDPYRRTRRAPIKTNPHDIPSQFI 215
>SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 782
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 603 TCANCTKDEKSKISNSKVCSSETEELIKEIYKHVLETPGSRKKETSRDE 651
T NC K S S + SS+ +++I +IY+ E P K+ +R +
Sbjct: 72 TLQNCVKSV-SPNHESLIVSSDDQKIIDDIYEKFGEKPAEDTKDENRSQ 119
>SPBP23A10.14c |ell1||RNA polymerase II transcription elongation
factor SpELL|Schizosaccharomyces pombe|chr 2|||Manual
Length = 533
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 623 SETEELIKEIYKHVLETPGSRKKETSRD-ENKRILTSRSVGGSMRTSKRDVK 673
S+ +L +E+ E +R +E ++ E KRI+T ++ GGS T+ R K
Sbjct: 93 SQKLQLRRELDSLTAERVKNRTQEAQKEKEEKRIVTLQNDGGSKNTTARKQK 144
>SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 923
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 391 RTHRPQLNLKAQHYEDYFYHHQRKSRSPNRHERNV-KEIFES--DLSSETPQAIESGRRQ 447
R PQ+ L +H + Y+ + SR+P + + E F++ D + P+++ +
Sbjct: 181 RDGEPQVVLNERHLLNMEYYRPKSSRTPEQEANGMWDETFDNFHDSKPKGPESVGLDIKF 240
Query: 448 MKTTNMANAPEH 459
+ N+ PEH
Sbjct: 241 VDYGNVYGVPEH 252
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 363 EKSSPKSRRKFAEDNIRYHYYKEVPPSPRTHRPQLNLKAQHYEDYF 408
+KS+P ++ ++ +N R Y P + Q+ LKA ED F
Sbjct: 11 DKSTPSNQNNYSNNNSRTPSYSLPAPVAQKKNAQIPLKASKPEDPF 56
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 27.9 bits (59), Expect = 7.5
Identities = 29/139 (20%), Positives = 53/139 (38%), Gaps = 7/139 (5%)
Query: 62 NEATRHCQDISYLENISKPSSNVTELKQVPSSSKHQIEQSVQGQYNESEAKVLYKTSENN 121
+E++ D S + S+ S+ + +SS + + S +ESE+ +SE++
Sbjct: 245 SESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESES-----SSEDS 299
Query: 122 FPSSDPSDQTPKSQDHDDNNRCTEVSRVDSXXXXXXXXXXXXXXXVVPDESVLRSH--KT 179
+S SD S D N+ + + V DE + H
Sbjct: 300 DSTSSSSDSDSSSSSEDGNSNTDTTTSGEVSAQSSTNSTSSEESTSVKDEDSSKIHDKSL 359
Query: 180 KSALENVVATNSTDSYEST 198
K E+ ++ ST S +T
Sbjct: 360 KRKHEDDESSTSTKSSRTT 378
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 427 EIFESDLSSETPQA--IESGRRQM---KTTNMANAPEHPRNESGTLNSRPNTYIEDQTCH 481
E FE + SSE ++ +E ++ +T + PR++ L++ P TY
Sbjct: 433 EEFEEEESSEEEESEDVEYPTEEITERETIEEYQSASEPRSQREDLHAEPLTYFNQSNVE 492
Query: 482 ETHLNKTQDTDMSTDKTDRALCEI 505
++ ++T S+D +R L ++
Sbjct: 493 VDNVELRKNTQPSSDAANRDLYQV 516
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.9 bits (59), Expect = 7.5
Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 3/125 (2%)
Query: 78 SKPSSNVTELKQVPSSSKHQIEQSVQGQYNESEAKVLYKTSENNFPSSDPSDQTPKSQDH 137
S PSS+ T PSSS S + S + +S ++ SS S + S
Sbjct: 142 SSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 201
Query: 138 DDNNRCTEV-SRVDSXXXXXXXXXXXXXXXVVP--DESVLRSHKTKSALENVVATNSTDS 194
++ + S S P S + + + + + V T S+ S
Sbjct: 202 SSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFISTVTVTPSSSS 261
Query: 195 YESTA 199
+++
Sbjct: 262 SSTSS 266
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 551 MLPNSGPSFNYSNQANIPPYIPAFTNPCCYPILPVCPMNCIQN 593
M ++ PS N N N P T+ Y + P CP +QN
Sbjct: 1 MSSDNTPSINRRNNENPPQSSLPTTSGIVYNMFPACPYPHVQN 43
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 27.5 bits (58), Expect = 9.9
Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 3/106 (2%)
Query: 445 RRQMKTTNMANAPEHPRNESGTLNSRPNTYIEDQTCHETHLNKTQDTDMSTDKTDRALCE 504
+R + + NA H + R + D H+ K+ T +++ T R E
Sbjct: 704 KRLVTNPSNVNASWHSNMLKRQEDLRKKKPLTDNGATSRHMLKSGLTRVTSKPTQRFANE 763
Query: 505 I-KDILQSFLQEIKKEATVSQCEKSDVTSKAAGNVPNNIQLNSTNA 549
+ +D+ +F I K+ + VT + G++ NN + +TN+
Sbjct: 764 LAEDMSLAFHSTIPKKMEPDSV--TSVTQPSVGSLRNNFDIGTTNS 807
>SPAC664.01c |swi6|SPAC824.10c|chromodomain protein
Swi6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 94 SKHQIEQSVQGQYNESEAKVLYKTSENNFPSSDPSDQTPKSQDH 137
S ++ + Q + NESE + +T N P PS + PK D+
Sbjct: 212 SDNESKSPSQKESNESEDIQIAETPSNVTPKKKPSPEVPKLPDN 255
>SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1717
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 877 KSTATQSERKMSFFERMKTKMQMEQARRD 905
+STA Q ++M FE+ T+ Q EQA ++
Sbjct: 1139 QSTANQRAKQMEKFEKSATEKQKEQALKE 1167
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Query: 531 TSKAAGNVP---NNIQLNSTNASMLPNSGPSF 559
++ AGN+ NN ++ TNASM PN PS+
Sbjct: 100 SNSPAGNLEPSTNNAGVHMTNASMNPNVNPSY 131
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 27.5 bits (58), Expect = 9.9
Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 7/138 (5%)
Query: 412 QRKSRSPNRHERNVKEIFESDLSSETPQAIESGRRQMKTTNMANAPEHPRNESGTLNSRP 471
QR++ ++ ++ S SS+T + S + +KT+++ H S ++ P
Sbjct: 362 QRQAYMTDKMPLREIDVGSSQSSSKTARLNSSPKSTLKTSSVKTRRSHSAQSSRKVSDYP 421
Query: 472 NTYIEDQTCHETHLNKTQDTDMSTDKT-DRALCEIKDILQSFLQEIKKEATVSQCE---- 526
N + ++ TQ + M D+ +R + D F E ++A++S E
Sbjct: 422 NMVVITPADLPEGIDTTQGS-MEFDRIHNRWRRKGHDSDLGFDFETDEDASLSHPERTIL 480
Query: 527 -KSDVTSKAAGNVPNNIQ 543
K+ T A N PNN++
Sbjct: 481 FKAASTRHQANNDPNNLE 498
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.128 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,538,091
Number of Sequences: 5004
Number of extensions: 194715
Number of successful extensions: 619
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 591
Number of HSP's gapped (non-prelim): 48
length of query: 1007
length of database: 2,362,478
effective HSP length: 80
effective length of query: 927
effective length of database: 1,962,158
effective search space: 1818920466
effective search space used: 1818920466
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 58 (27.5 bits)
- SilkBase 1999-2023 -