Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002833-TA|BGIBMGA002833-PA|undefined
(1007 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 36 0.16
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 34 0.50
SB_50655| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.66
SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) 34 0.66
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 33 1.2
SB_33000| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.5
SB_13785| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.5
SB_10477| Best HMM Match : DUF602 (HMM E-Value=1) 33 1.5
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.0
SB_5079| Best HMM Match : fn3 (HMM E-Value=1.3e-35) 32 2.0
SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1) 32 2.7
SB_28998| Best HMM Match : eIF_4EBP (HMM E-Value=4.5) 32 2.7
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.7
SB_53615| Best HMM Match : GETHR (HMM E-Value=5.3e-09) 31 3.5
SB_39770| Best HMM Match : TolA (HMM E-Value=0.33) 31 3.5
SB_11869| Best HMM Match : Excalibur (HMM E-Value=8) 31 3.5
SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08) 31 3.5
SB_8981| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.5
SB_46010| Best HMM Match : RNase_PH (HMM E-Value=3.00004e-41) 31 4.7
SB_42040| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.7
SB_16501| Best HMM Match : Fork_head (HMM E-Value=3.3e-29) 31 4.7
SB_59677| Best HMM Match : RVT_1 (HMM E-Value=2.1e-28) 31 6.2
SB_43946| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 6.2
SB_39603| Best HMM Match : HATPase_c (HMM E-Value=0.0009) 31 6.2
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 31 6.2
SB_17128| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 6.2
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 6.2
SB_38518| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.1
SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026) 30 8.1
SB_24124| Best HMM Match : DUF1213 (HMM E-Value=3.9) 30 8.1
SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43) 30 8.1
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 35.9 bits (79), Expect = 0.16
Identities = 42/180 (23%), Positives = 69/180 (38%), Gaps = 10/180 (5%)
Query: 360 PVKEKSSPKSRRKFAEDNIRYHYYKEVPPSPRTHRPQLNLKAQHYEDY-FYHHQRKSRSP 418
P K SP+ + ++ RYH + R R + N + D F QRKSRS
Sbjct: 239 PKKRSRSPRRNSQRHKERSRYHRSRS---RSRHRRSRSNSPSMRKSDRKFKKSQRKSRSR 295
Query: 419 NRHERNVKEIFESDLSSETPQAIESGRR-----QMKTTNMANAPEHPRNESGTLNSRPNT 473
+R+ S SS + +SG R + K+ + + + R +S + SR +
Sbjct: 296 SRNRSRSHSRKRSRSSSRSKSRKKSGSRSNSQSKQKSRSRSRSNSQSRKKSSSKKSRSRS 355
Query: 474 YIEDQTCHETHLNKTQDTDMSTDKTDRALCEIKDILQSFLQEIKKEATVSQCEKSDVTSK 533
Q+ + K++ S + R K L + KK + S K + SK
Sbjct: 356 RSISQSRKKVKSKKSRSRSHS-NSPSRKKARSKKSRSRSLSKSKKRRSRSPITKKESNSK 414
Score = 31.5 bits (68), Expect = 3.5
Identities = 37/180 (20%), Positives = 77/180 (42%), Gaps = 10/180 (5%)
Query: 360 PVKEKSSPKSRRKFAEDNIRYHYYKEVPPSPRTHRPQLNLKAQHYEDYFYHHQRKSRSPN 419
P K +P+ R + R P R+ P+ N +Q +++ +H+ +SRS +
Sbjct: 211 PRKRSRTPRKRSRSPRKRSRSPRKGSHTPKKRSRSPRRN--SQRHKERSRYHRSRSRSRH 268
Query: 420 RHER-NVKEIFESDLSSETPQAIESGRRQMKTTNMANAPEHPRNESGT---LNSRPNTYI 475
R R N + +SD + Q R + ++ + + + S + SR N+
Sbjct: 269 RRSRSNSPSMRKSDRKFKKSQRKSRSRSRNRSRSHSRKRSRSSSRSKSRKKSGSRSNSQS 328
Query: 476 EDQTCHETHLNKTQDTDMSTDKTDRALCEIKDILQSFLQEIKKEATVSQCEKSDVTSKAA 535
+ ++ + N +Q S+ K R+ + I QS +++K + + S+ + + K A
Sbjct: 329 KQKSRSRSRSN-SQSRKKSSSKKSRS--RSRSISQS-RKKVKSKKSRSRSHSNSPSRKKA 384
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 34.3 bits (75), Expect = 0.50
Identities = 33/188 (17%), Positives = 71/188 (37%), Gaps = 3/188 (1%)
Query: 70 DISYLENISKPSSNVTELKQVPSSSKHQIEQSVQGQYNESEAKVLYKTSENNFPSSDPSD 129
D S +N + +SN SSS + + + S ++ +N S++ +
Sbjct: 76 DNSNSDNSNTDNSNSDNSSSDNSSSDNSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQ 135
Query: 130 QTPKSQDHDDNNRCTEVSRVDSXXXXXXXXXXXXXXXVVPDESVLRSHKTKSALENVVAT 189
S D +N T S D+ PD + T ++ + ++
Sbjct: 136 DNSNSDDSKPDNSNTNNSNSDNSNTDNSNSDNSTSDNSNPDNLTSDNSNTDNSGSDNSSS 195
Query: 190 NSTDSYESTAGHRMAQRAHAGDC---NRQHHRANIDHAYKGRSESLHERKEKGHHRQKIM 246
+ +S ST+ + + +++ + N +N D++Y S S + +K+ +
Sbjct: 196 GNFNSDNSTSDNSTSDNSNSDNSTSDNSTSDNSNSDNSYTDNSTSDNSKKDNSNPNNSNT 255
Query: 247 NNNRDLDN 254
+N+ DN
Sbjct: 256 DNSSSADN 263
Score = 30.7 bits (66), Expect = 6.2
Identities = 41/216 (18%), Positives = 79/216 (36%), Gaps = 21/216 (9%)
Query: 59 NQLNEATRHCQDISYLENISKPSSNVTELKQVPSSSKHQIEQSVQGQYNESEAKVLYKTS 118
N N D S +N + +SN SSS + N + TS
Sbjct: 251 NNSNTDNSSSADNSNPDNSNSDNSNTDNSNSDNSSSDNS---------NSDNSNTDNSTS 301
Query: 119 ENNFPSSDPSDQTPKSQDHDDNNRCTEV----SRVDSXXXXXXXXXXXXXXXVVPDESVL 174
N+ P + SD + + + DN+ + S ++ PD
Sbjct: 302 NNSNPENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSNSDNSNSDNSTSDNSNPDNLTS 361
Query: 175 RSHKTKSALENVVATNSTDSYESTAGHRMAQRAHAGDCNRQHHRANIDHAYKGRSESLHE 234
+ T ++ + ++ + +S ST+ + + + + N +N D++Y S S +
Sbjct: 362 DNPNTDNSGSDNSSSGNFNSDNSTSDNSNSDNSTSD--NSSSDNSNSDNSYTDNSTSDNS 419
Query: 235 RKEKGHHRQKIMNNNRDLDNEFIADIIRRQYKPVKL 270
+K+K + NN + DN A I R + ++
Sbjct: 420 KKDKSN------PNNSNTDNSSSARITRTRIAKTRI 449
>SB_50655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2033
Score = 33.9 bits (74), Expect = 0.66
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 399 LKAQHYEDYFYHHQRKSRSPNRHERNVKEIFESDLSSETPQAIESGRRQMKTTNMANAPE 458
L +++ F HH + +R+ R R + +F+ TPQA + R+ K T A
Sbjct: 1255 LALDNFQSKFQHHLQVTRTLRRLTRKKQRLFKLAKKVNTPQAWSAYRKHRKVTTQAINKT 1314
Query: 459 HPRNESGTLNSRPNT 473
SG L+ +T
Sbjct: 1315 RNNYVSGLLDENIHT 1329
>SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)
Length = 428
Score = 33.9 bits (74), Expect = 0.66
Identities = 57/228 (25%), Positives = 88/228 (38%), Gaps = 26/228 (11%)
Query: 196 ESTAGHRMAQRAHAGDCNRQHHRANIDHAYKGRSESL-HERKEKGHHRQKIMNNNRDLDN 254
E H +A D RQ R + + RS SL HE + R+ ++ R D
Sbjct: 178 EKPRPHPVADEDERADVRRQEERTPLKR--RSRSRSLRHEDHDDATPRRSRSHSLRHEDE 235
Query: 255 EFIADIIRRQYKPVKLFGRKESDFSQLSAPVCRDQEYSYNNYFGDCSELCSCCYDSNRSK 314
E + R + + S+ S+P R ++ + + S L S RSK
Sbjct: 236 EERSPSGGRHEREDSREPSSAEESSRTSSPHSRKKKSRKHRHRSRSSSLSS----RRRSK 291
Query: 315 YKRHIDLSDMRSICDTRLYSSNKAKIKTRRRYMEAQNDSELYDLIPVKEKSSPKSRRKFA 374
+KR RS R SS+K+K R S+ Y + +S RR+ +
Sbjct: 292 HKRKSKRDRSRS----RDRSSSKSKSLRR---------SKKYS----RSRSRSSERRRRS 334
Query: 375 EDNIRYHYYKEVPPSPRT-HRPQLNLK-AQHYEDYFYHHQRKSRSPNR 420
H Y+ SPR HR + ++ Y H+R+SRS +R
Sbjct: 335 RSRSTEHRYRSRSRSPRRKHRRSTSTSPSRRYRSGKKGHKRRSRSASR 382
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 201 HRMAQRAHAGDCNRQHHRANIDHAYKG----RSESLHERKEKGHHRQKIMNNNRDLDN 254
HR H D + HHR ++ H + R ++ H R++ HHRQ +++ +D D+
Sbjct: 637 HRQDVDHHRQDAD--HHRQDVVHPRQDVVHRRQDADHRRQDADHHRQDVVHPRQDADH 692
Score = 30.3 bits (65), Expect = 8.1
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 216 HHRANIDHAYKGRSESLHERKEKGHHRQKIMNNNRDLDN 254
H R + DH R + +H R++ HHRQ ++ +D D+
Sbjct: 671 HRRQDADHH---RQDVVHPRQDADHHRQDAEHHRQDADH 706
>SB_33000| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 421 HERNVKEIFESDLSSETPQAIESGRRQMKTTNMANAPEHPRNESGTLNSRPNTYIEDQTC 480
+E K + E S AI +G + KT + + PR T +S+ N Y + + C
Sbjct: 183 NEATAKRLKEMSQQSGEISAITTGPPRRKTGSKGGRRQEPRKPPHTDSSKSNPYPKCKFC 242
Query: 481 HETH 484
H H
Sbjct: 243 HRLH 246
>SB_13785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 243 QKIMNNNRDLDNEFIADIIRRQYKPVKLFGRKESDFSQLSAPVCRDQE 290
+KI+++ ++L+ ++ D R ++ K F K SDF+++ A C D+E
Sbjct: 204 EKIVSDEKNLEG-YVVDGFPRSHEQAKNFTEKVSDFNRVVALECSDEE 250
>SB_10477| Best HMM Match : DUF602 (HMM E-Value=1)
Length = 429
Score = 32.7 bits (71), Expect = 1.5
Identities = 16/75 (21%), Positives = 35/75 (46%)
Query: 860 FDHHVPNVPLCLKEIEVKSTATQSERKMSFFERMKTKMQMEQARRDEYQRNCSTQTKQNV 919
FD P+ L +++K+ A + +M + +TK ++ + + + NC+ +
Sbjct: 225 FDKMSPSNDLQTPNLDLKAQAVTQDTEMQLDNKSETKSKISETKHNVSPDNCTDLEQSIK 284
Query: 920 TEDQTKPGLFNWKNV 934
+ED+ P N +V
Sbjct: 285 SEDKLSPETLNLSDV 299
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 32.3 bits (70), Expect = 2.0
Identities = 32/177 (18%), Positives = 61/177 (34%), Gaps = 6/177 (3%)
Query: 75 ENISKPSSNVTELKQVPSSSKHQIEQSVQGQYNESEAKVLYKTSENNFPSSDPSDQTPKS 134
+N S S+ + K+ +H++ S+++ K +N D S+ + S
Sbjct: 133 DNSSDVSAKKKQCKEERKRKRHKLSCESSSCEESSDSEKRLKKEKNKEKQRDSSESS--S 190
Query: 135 QDHDDNNRCTEVSRVDSXXXXXXXXXXXXXXXVVPDESVLRSHKTKSALENVVATNSTDS 194
DD R + + D D+ R K K +++ +S S
Sbjct: 191 DSEDDRKRRKKKVKKDKKQKAKDSSESLSDS---EDDRERRKKKVKKEIKHKAKDSSESS 247
Query: 195 YESTAGHRMAQRAHAGDCNRQHHRANIDHAYKGRSESLHERKEKGHHRQKIMNNNRD 251
+S +R ++H + +S S E K K +K N++D
Sbjct: 248 IDSEDDRERKERKKKNKKEKKHKSKETSSSESNKS-SDSEEKAKSKKNKKDKKNDKD 303
>SB_5079| Best HMM Match : fn3 (HMM E-Value=1.3e-35)
Length = 978
Score = 32.3 bits (70), Expect = 2.0
Identities = 28/131 (21%), Positives = 56/131 (42%), Gaps = 14/131 (10%)
Query: 196 ESTAGHRMAQRAHAGDCNRQHHRANIDHAYKGRSESLHERKEKGHHRQKIMNNNRDLDNE 255
++ AG R+A + AG+C +A RS S+ + +++ + + L E
Sbjct: 647 KAKAGERVASKTKAGECVASKAKA-------ARSRSIESNNKNTPCLREVDHQSNALSIE 699
Query: 256 FIADIIRRQYKPVKLFGRKESDFSQLSAPVCRDQ----EYSYNNYFGDCSELC-SCCYDS 310
DI+ Q K V+ + + +PV Q +Y ++N + D + + CC+
Sbjct: 700 IKPDIV--QLKEVQELREMAKEVDGVKSPVDASQPNPNDYEFDNLYLDMNGIIHPCCHPE 757
Query: 311 NRSKYKRHIDL 321
N+ K ++
Sbjct: 758 NKPAPKNEDEM 768
>SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1)
Length = 566
Score = 31.9 bits (69), Expect = 2.7
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 872 KEIEVKSTATQSERKMSFFERMKTKMQMEQARRDEYQRNCSTQTKQNVTEDQT----KPG 927
K + K S R+ S + KT+ +Q ++ QR S +TK + T+D+ +PG
Sbjct: 405 KTSKPKEKQAASPRQAS--RKTKTRKPQDQDKQAARQRQASRKTKTSKTQDRQATSRRPG 462
Query: 928 LFNWKNVQPKPLNKDPLAFSYLKQKQLAEGDVK 960
+ K KP ++D A ++K + D +
Sbjct: 463 QASRKTKTSKPQDQDKQAARQARRKTSKQQDAE 495
>SB_28998| Best HMM Match : eIF_4EBP (HMM E-Value=4.5)
Length = 561
Score = 31.9 bits (69), Expect = 2.7
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 616 SNSKVCSSETEELIKEIYKHVLETPGSRKKETSRDENKRILTSRSVGGS-MRTSKRDVKI 674
S S S+ + +K+V ET +K +S ++NK I + R GG +RT+ R +
Sbjct: 77 SASPTISANSRTATVASFKNV-ETELQQKDASSDNDNKSISSRRDTGGRVLRTTSRPLSA 135
Query: 675 GTPKLKCYSKSCEAITPRMA 694
P+ + + TPR A
Sbjct: 136 PMPRRSISDLARDLPTPRQA 155
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 31.9 bits (69), Expect = 2.7
Identities = 17/78 (21%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 477 DQTCHETHLNKTQDTDMSTDKTDRALCEIKD---ILQSFLQEIKKEATVSQCEKSDVTSK 533
+Q+ HE + TQ D+ D+ E+K +L++ L+++K+E + + +D+ S+
Sbjct: 1107 EQSSHEKTIKDTQKHLSRMDRADKENSELKQELALLKTKLKKVKEELARQREQNTDLLSR 1166
Query: 534 AAGNVPNNIQLNSTNASM 551
+ + + +++ N S+
Sbjct: 1167 SQKMMVDELEVQKLNNSL 1184
>SB_53615| Best HMM Match : GETHR (HMM E-Value=5.3e-09)
Length = 653
Score = 31.5 bits (68), Expect = 3.5
Identities = 37/195 (18%), Positives = 77/195 (39%), Gaps = 8/195 (4%)
Query: 58 QNQLNEATRHCQDISYLENISKPSSNVTELKQVPSSSKH---QIEQSVQGQYNESEAKVL 114
+ L E+T +++S + + S T ++ S S H +++S + N SE+
Sbjct: 326 RESLKESTHARENLSESTHARESLSESTHARESLSESTHARESLKESTHARENLSESTHA 385
Query: 115 YKT-SENNFPSSDPSDQTPKSQDHDDNNRCTEVSRVDSXXXXXXXXXXXXXXXVVPDESV 173
+ SE+ S+ T + ++ E S +S + + +
Sbjct: 386 RENLSESTHARESLSESTHARESLSESTHARE-SLSESTHARESLSESTHARESLKESTH 444
Query: 174 LRSHKTKSALENVVATNSTDSYESTAGHRMAQRAHAGDCNRQHHRANIDHAYKGRSESLH 233
R + ++S + ST + ES + A+ + + + + + HA + SES H
Sbjct: 445 ARENLSESTHARESLSESTHARESLSESTHARESLSESTHARESLSESTHARESLSESTH 504
Query: 234 ERK---EKGHHRQKI 245
R+ E H R+ +
Sbjct: 505 ARESLSESTHARESL 519
>SB_39770| Best HMM Match : TolA (HMM E-Value=0.33)
Length = 732
Score = 31.5 bits (68), Expect = 3.5
Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 4/120 (3%)
Query: 611 EKSKISNSKVCSSETEELIKEIYKHVLE--TPGSRKKETSRDENKRILTSRSVGGSMRTS 668
EK + N + ELI++ K + + T + + E KR ++S M
Sbjct: 388 EKLQQKNQYELQQKKTELIEKHEKAMEDVLTELDQVQNAELGETKRKMSSVQAKYDMTMD 447
Query: 669 KRDVKIGTPKLKCYSKSCEAITPRMAGNYYDGTYASYSDTLLERLSIE-PTPSETVSETD 727
DV++ TP + S E TP M + D S ++ L +E TP T+ D
Sbjct: 448 SLDVEVSTPHMTMDSLDAEVSTPHMTMDSLD-VEVSTPHMTMDSLDVEVSTPHMTMDSLD 506
>SB_11869| Best HMM Match : Excalibur (HMM E-Value=8)
Length = 269
Score = 31.5 bits (68), Expect = 3.5
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 12/91 (13%)
Query: 60 QLNEATRHCQDISYLENISKPSSNVTELKQVPS----SSKHQIEQSVQ--GQYNESEAKV 113
++NE + +D S +KP + E +PS +++++ E S G E+ A+V
Sbjct: 182 EVNETDKSAEDASE----AKPEDDAAEGAAIPSEETGAAENKPESSATEGGDKPEATAEV 237
Query: 114 LYK--TSENNFPSSDPSDQTPKSQDHDDNNR 142
+ T E N S PS+ TP ++D+ +R
Sbjct: 238 TKEETTKEGNDESEKPSEDTPNTEDNSAESR 268
>SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08)
Length = 865
Score = 31.5 bits (68), Expect = 3.5
Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 10/143 (6%)
Query: 331 RLYSSNKAKIKTRRRYMEAQNDSELYDLIPVKEKSSPKSRRKFAEDNIRYHYYKEVPPSP 390
R SS+ + +R + ++ D + ++K S +S K E + + V PS
Sbjct: 274 RRNSSSHHRSSSREKDRKSSMDKSIRSSSRDRDKKSRRSWSKSKERDSKLREKTMVAPSK 333
Query: 391 RTHRPQLNLKAQHYE------DYFYHHQRKSRSPNRHERNVKEIFESDLSSETPQAIESG 444
R + E D Y + KS+SP+R R FE S + E
Sbjct: 334 SPDRSSKRRSSSRDESARERPDSSYRRRSKSKSPDRRSRK----FEEQTSHRQSMSRERD 389
Query: 445 RRQMKTTNMANAPEHPRNESGTL 467
RR ++ + + + E ++ +L
Sbjct: 390 RRPVEASKRSGSREGKSEDNSSL 412
>SB_8981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1726
Score = 31.5 bits (68), Expect = 3.5
Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 16/144 (11%)
Query: 480 CHETHLNKTQDTDMSTDKTDRALCEIKDILQSFLQEIKKEATVSQCE--KSDVTSKAAGN 537
C E + T +T S+DK + + E + S VS+C K+ +S+A +
Sbjct: 1109 CSEQSIYSTAETSESSDKLESKVSEQLGFI-SDQNSPNCYVKVSECSLSKTPTSSRADCS 1167
Query: 538 VPNNIQLNSTNASMLPNSGPSFNYSNQANIPPYIPAFTNPCCYPILPVCPMNCIQNGYVV 597
NN Q ++S + + PS + +Q P P+ T+ C + P P
Sbjct: 1168 QTNNFQSCKPSSSQINATEPSTHPVSQ---PGSSPSQTSTCSQ-VNPPEPRT-------- 1215
Query: 598 PSPSYTCANCTKDEKSKISNSKVC 621
PS+ C CT + ++ VC
Sbjct: 1216 -PPSWICGACTLENDWQLIECSVC 1238
>SB_46010| Best HMM Match : RNase_PH (HMM E-Value=3.00004e-41)
Length = 376
Score = 31.1 bits (67), Expect = 4.7
Identities = 31/130 (23%), Positives = 49/130 (37%), Gaps = 8/130 (6%)
Query: 383 YKEVPPSPRTHRPQLNLKAQHYEDYFYHHQRKSRSPNRHER------NVKEIFESDLSSE 436
Y+E P +KA Y+ Y+ + S R E+ VK +F + +E
Sbjct: 107 YREYEGEPEDEAVYAKIKAASYDKYYAIAESASAKSERGEKFAEIKEEVKALFTEEDLAE 166
Query: 437 TPQAIESGRRQMKTTNMANAPEHPRNESGT-LNSRPNTYIEDQTCHETHLNKTQDTDMST 495
P E + + T A + E GT L+ R T I C +L T + + T
Sbjct: 167 NPDLAELINKYIYKT-QKEAVRNVILEKGTRLDGRKTTEIRPIWCEVDYLPSTHGSAIFT 225
Query: 496 DKTDRALCEI 505
+AL +
Sbjct: 226 RGETQALATV 235
>SB_42040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 31.1 bits (67), Expect = 4.7
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 13/116 (11%)
Query: 382 YYKEVPPSPRTHRPQL-NLKAQHYEDYFYHHQRKSRSPNRHERNVKEIFESDLSSETPQA 440
YYK P + P L N K H E+ YH K N ++ + D + P
Sbjct: 16 YYK---PDHLNNEPDLLNNKPDHLENKPYHLNNKPDHLNNKPDHLNN--KPDHLNNKPDH 70
Query: 441 IESGRRQM--KTTNMANAPEHPRNESGTLNSRPNTYIEDQTCH----ETHLNKTQD 490
+ + + K ++ N P+H N+ LN++P+ ++ ++ H HLN D
Sbjct: 71 LNNRPYHLNNKPDHLNNKPDHLNNKPDNLNNKPD-HLNNKPDHLNNKPDHLNNKSD 125
>SB_16501| Best HMM Match : Fork_head (HMM E-Value=3.3e-29)
Length = 594
Score = 31.1 bits (67), Expect = 4.7
Identities = 17/54 (31%), Positives = 22/54 (40%)
Query: 599 SPSYTCANCTKDEKSKISNSKVCSSETEELIKEIYKHVLETPGSRKKETSRDEN 652
SP C T K S S C S L +Y+H+ TP ETS ++
Sbjct: 29 SPGKICQAHTNGHKGGTSKSPCCCSHENHLPGIVYQHIPGTPNGVAIETSAPDH 82
>SB_59677| Best HMM Match : RVT_1 (HMM E-Value=2.1e-28)
Length = 1159
Score = 30.7 bits (66), Expect = 6.2
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 421 HERNVKEIFESDLSSETPQAIESGRRQMKTTNMANAPEHPRNESGTLNSRPNTYIEDQTC 480
+E K + E S AI +G + KT + + PR T +S+ N + + + C
Sbjct: 91 NEATAKRLKEMSQQSGEISAITTGPPRRKTGSKGGRRQEPRKPPHTDSSKSNPHPKCKFC 150
Query: 481 HETH 484
H H
Sbjct: 151 HRLH 154
>SB_43946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 230
Score = 30.7 bits (66), Expect = 6.2
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 340 IKTRRRYMEAQNDSELYDLIPVKEKSSPKSRRKFAEDNIRYHYYKEVPPSPRTHRPQLNL 399
+K RRR E Q++ LYD I E++ + + +D+ Y + P S
Sbjct: 10 LKHRRRIQETQSEEYLYDDINNVEEAPMEPPAQEKKDS----YRQRKPKS---------- 55
Query: 400 KAQHYEDYFYHHQRKSRSPNRHERN 424
K Q Y ++ YH R RS R+E N
Sbjct: 56 KPQSYYNHNYHKPRGVRSGRRYENN 80
>SB_39603| Best HMM Match : HATPase_c (HMM E-Value=0.0009)
Length = 888
Score = 30.7 bits (66), Expect = 6.2
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 449 KTTNMANAPEHPRNESGTLNSRPNT---YIEDQTCHETH-LNKTQDTDMSTDKTDRALC 503
+ T+ A+ +HP T+ + PNT + D T H H + TQ + TD T C
Sbjct: 316 QNTDSAHRTDHPTQTVRTVQTLPNTDSAHRTDSTQHSAHRTDSTQHSAHRTDSTQHRQC 374
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 30.7 bits (66), Expect = 6.2
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 597 VPSPSYTCANCTKDEKSKISNSKVCSSETEELIKEIYKHVLETPGSRKKETS-RDENKRI 655
VP ++ C CT ++ + S ++V S +E +K+ + PGS K+T + ++ +
Sbjct: 1761 VPRGNWACQVCTGADEDRSSKARVKKSTIKEALKKAKGK--QKPGSATKKTKPKQDSSKK 1818
Query: 656 LTSRSVGGSMRTSKRDV-KIGTPKLKCYSKS 685
RS + S+ K P+L +KS
Sbjct: 1819 KRKRSPSPATSASREGTRKAKRPRLTDSAKS 1849
>SB_17128| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 30.7 bits (66), Expect = 6.2
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Query: 57 IQNQLNEATRHCQDISYLENISKPSSNVTELKQVPSSSKHQIEQSVQGQYNESEAKVLYK 116
I + L++ + H DIS E+ S + +L K Q + S GQ SE +
Sbjct: 354 IDSSLSDVSDHSGDISDFEHPIYDESLLKDLFYTAEGGKGQSD-SDSGQTVSSEEYTILS 412
Query: 117 TSENNFPSSDPSDQTPKSQDHD 138
E+N DP + +++ D
Sbjct: 413 DDESNLTLEDPGNMVSTNKNKD 434
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 30.7 bits (66), Expect = 6.2
Identities = 44/199 (22%), Positives = 76/199 (38%), Gaps = 22/199 (11%)
Query: 273 RKESDFSQLSAPVCRDQEYSYNNYFGDCSELCSCCYDSNRSKYKRHIDLSDMRSICDTRL 332
RK+ D + S P+ + ++ + +Y S DS + K + D R R
Sbjct: 766 RKKEDPKEKSPPLPKSKKMANRSYRKHNSSESESDSDSPPERKKGSVSPRDQRRRSPMRR 825
Query: 333 YSSNKAKIKTRRRYMEAQNDSELYDLIPVKEKSSPKSRRKFAEDNIRYHYYKEVPPSPRT 392
S A + RRR + S P + SP+ RR+ + ++ R +E P PR
Sbjct: 826 RRSRDASPRRRRRSASGSDSS------PHRRSESPRDRRRRSPEHRR---RREASP-PRR 875
Query: 393 HRPQLNLKAQHYEDYFYHHQRKSRSPNRHERNVKEIFESDLSSETPQAIESGRRQMKTTN 452
R + + + +R+S SP R S ++P RR+ K+
Sbjct: 876 DRKRYDSPPR--------RRRRSPSPPPRRRRRDSYSPSRRRRDSPTPSPPPRRRRKSP- 926
Query: 453 MANAPEHPRNESGTLNSRP 471
+P PR + ++ P
Sbjct: 927 ---SPSPPRRRRRSPSNSP 942
>SB_38518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1399
Score = 30.3 bits (65), Expect = 8.1
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 58 QNQLNEATRHCQD--ISYLENISKPSSNVTE----LKQVPSSSKHQIEQSVQGQYNESEA 111
+++ N RH D SY ++ + P+ +V ++ S ++H+I S ++
Sbjct: 1159 RDRKNTPDRHSSDRKSSYSDHKTTPTEHVPSGDSLRRKTSSRNRHEIADSDDDDDDDDVE 1218
Query: 112 KVLYKTSENNFPSSDPSDQTPKSQDHDDNNRCTEVSRVDS 151
KT++N S PS + H +R E SR S
Sbjct: 1219 VTSPKTAKNTGTSQRPSLSRNSASSHSREDRGKESSRTSS 1258
>SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026)
Length = 3342
Score = 30.3 bits (65), Expect = 8.1
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 201 HRM--AQRAHAGDCNRQHHRANIDHAYKGRSESLHERKEKGHHRQ 243
HR+ QR D QH + H Y R + H++K++ H R+
Sbjct: 874 HRLHQQQRHKKNDNPHQHQQQKQQHGYHHRHQQKHQQKQQQHQRK 918
>SB_24124| Best HMM Match : DUF1213 (HMM E-Value=3.9)
Length = 283
Score = 30.3 bits (65), Expect = 8.1
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 414 KSRSPNRHERNVKEIFESDLSSETPQAIESGRRQMKTTNMANAPEHPRNESGTLNSRPNT 473
K ++P + R ++ + + PQA R+ KT+N P+++ R +
Sbjct: 170 KQQAPRQASRKPQDKQAASPKTSKPQAPGKASRKTKTSNPQTKTSKPQDQDKQAARRKTS 229
Query: 474 YIEDQTCHET-HLNKTQD 490
++DQ H +K QD
Sbjct: 230 KLQDQDKQAARHTSKLQD 247
>SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43)
Length = 1806
Score = 30.3 bits (65), Expect = 8.1
Identities = 27/113 (23%), Positives = 42/113 (37%), Gaps = 4/113 (3%)
Query: 428 IFESDLSSETPQAIESGRRQMKTTNMANAPEHPRNESGTLNSRPNTYIEDQTCHETHLNK 487
I E LS ET GR NAPE + TL R + E +E +
Sbjct: 1469 IDEDHLSKETEVPDNGGRETRSKRRAQNAPEEDKTVKRTLRKRTS---EPTKQYEPKTKQ 1525
Query: 488 TQDTDMSTDKTDRALCEIKDILQSFLQEIKKEA-TVSQCEKSDVTSKAAGNVP 539
T+ + + ++ + L E++KEA ++ D A G+ P
Sbjct: 1526 TRTSRRAKSPAGAEKKNLQAAQEDGLAELRKEALSIDHSIAGDSCKDAEGSSP 1578
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.128 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,373,263
Number of Sequences: 59808
Number of extensions: 1432852
Number of successful extensions: 4300
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 4209
Number of HSP's gapped (non-prelim): 120
length of query: 1007
length of database: 16,821,457
effective HSP length: 89
effective length of query: 918
effective length of database: 11,498,545
effective search space: 10555664310
effective search space used: 10555664310
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 65 (30.3 bits)
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