Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002833-TA|BGIBMGA002833-PA|undefined
(1007 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 26 1.3
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 26 1.8
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 25 2.3
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 25 2.3
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 25 3.1
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 24 5.4
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 5.4
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 24 7.1
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 24 7.1
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 24 7.1
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 24 7.1
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 23 9.4
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 9.4
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 9.4
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 23 9.4
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 23 9.4
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 26.2 bits (55), Expect = 1.3
Identities = 15/61 (24%), Positives = 24/61 (39%)
Query: 510 QSFLQEIKKEATVSQCEKSDVTSKAAGNVPNNIQLNSTNASMLPNSGPSFNYSNQANIPP 569
+ + + KE+T S +V+ N NN QL AS++ + PP
Sbjct: 703 KDIILNVPKESTQSLTTTGNVSYLTTNNTSNNSQLQIPRASLVSTTSVKSLRLEGDETPP 762
Query: 570 Y 570
Y
Sbjct: 763 Y 763
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 25.8 bits (54), Expect = 1.8
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 676 TPKLKCYSKSCEAITPRMA-GNYYDGTYASYSDTLLE-RLSIEPTPSETVSETDFTMESM 733
TP + YS E ITPR + +Y+ Y ++E + +E + V + T S
Sbjct: 142 TPSPQMYSSGGEEITPRQSHQSYHHMDSVEYKPEIMEYKPDVEEQRYKQVEISQMTEPSS 201
Query: 734 STE 736
ST+
Sbjct: 202 STK 204
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 25.4 bits (53), Expect = 2.3
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 702 YASYSDTLLERLSIEPTPSETVSETDFTMESMSTEKGKRNKFA 744
YAS SD + + + PSET T + S E + FA
Sbjct: 327 YASRSDMHSDNIEKKYPPSETEQSTSMDLPSDQVEPDNSSNFA 369
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 25.4 bits (53), Expect = 2.3
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 702 YASYSDTLLERLSIEPTPSETVSETDFTMESMSTEKGKRNKFA 744
YAS SD + + + PSET T + S E + FA
Sbjct: 327 YASRSDMHSDNIEKKYPPSETEQSTSMDLPSDQVEPDNSSNFA 369
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 25.0 bits (52), Expect = 3.1
Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 9/117 (7%)
Query: 374 AEDNIRYHYYKEVPPSPRTHRPQLNLKAQHYEDYFYHHQRKSRSPNRHERNVKEIFESDL 433
A+ ++ H Y ++ P+ + H+P + + Q D H P + R+ +
Sbjct: 239 AQSHLEAHCYFDIEPTVQQHQP-VTVNRQLNSDVQPGH---GSPPVKQHRSSSA--STTC 292
Query: 434 SSETPQAIESGRRQMKTTN--MANAPEHPRNESGTLNSRPNTYIEDQTCHETHLNKT 488
S T + G R+ + M E P S T + P T + T HLN T
Sbjct: 293 SGHTVRCFTGGPRKSHESQCPMLQKLEKPVLSSSTTTTSPMTSTK-STIVRNHLNST 348
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 24.2 bits (50), Expect = 5.4
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 624 ETEELIKEIYKHVLETPGSRKKETSRDEN 652
E+E+ I I ++ET K++ ++DE+
Sbjct: 273 ESEDAIYNIISEIIETTIQEKRDDAKDES 301
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.2 bits (50), Expect = 5.4
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 167 VVPDESVLRSHKTKSALENVVATNSTDSYEST 198
V+ D S+ R+ ++ SAL VATN+ S +++
Sbjct: 836 VLSDLSIKRTERSDSALFTCVATNAFGSDDTS 867
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.8 bits (49), Expect = 7.1
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 971 YKRNPFSPRNLIVRTLLGKDKSSY 994
++ N +S +++RT+ GK+K+ Y
Sbjct: 366 FETNRYSSGRVLMRTVRGKEKTCY 389
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.8 bits (49), Expect = 7.1
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 971 YKRNPFSPRNLIVRTLLGKDKSSY 994
++ N +S +++RT+ GK+K+ Y
Sbjct: 366 FETNRYSSGRVLMRTVRGKEKTCY 389
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 23.8 bits (49), Expect = 7.1
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 575 TNPCCYPILPVCPMNCIQNGYVVPSPSYTC 604
T+ Y +LP+ N +++ VP+ Y C
Sbjct: 380 TDRLLYSVLPISVANELRHSRPVPAKKYDC 409
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 23.8 bits (49), Expect = 7.1
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 575 TNPCCYPILPVCPMNCIQNGYVVPSPSYTC 604
T+ Y +LP+ N +++ VP+ Y C
Sbjct: 380 TDRLLYSVLPISVANELRHSRPVPAKKYDC 409
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 23.4 bits (48), Expect = 9.4
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Query: 296 YFGDCSELCSCCYDSNRSKYKRHIDLSDMRSICDTRLYSSNKAKIKTRRRYMEAQNDSEL 355
+FG S+ C++ NR +R+I++ + DT + S IK + + ++E
Sbjct: 315 FFGLVSDTALGCWNENRPLKRRNIEIVAKNN--DTLQFISGIKIIKQISSNIYERQNNEY 372
Query: 356 YDLIPVKEKSSPKSRRKFAEDNIR 379
++ K + F E N R
Sbjct: 373 IWIVSNKYQKIANGDLNFNEVNFR 396
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.4 bits (48), Expect = 9.4
Identities = 22/106 (20%), Positives = 39/106 (36%)
Query: 274 KESDFSQLSAPVCRDQEYSYNNYFGDCSELCSCCYDSNRSKYKRHIDLSDMRSICDTRLY 333
KES S+ R++ + + + S SC D NR K+ + + + L
Sbjct: 194 KESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKLLE 253
Query: 334 SSNKAKIKTRRRYMEAQNDSELYDLIPVKEKSSPKSRRKFAEDNIR 379
K +R R E ++ +E S +SR + + R
Sbjct: 254 ERTSRKRYSRSREREQKSYKNENSYRKYRETSKERSRDRTERERSR 299
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 9.4
Identities = 22/106 (20%), Positives = 39/106 (36%)
Query: 274 KESDFSQLSAPVCRDQEYSYNNYFGDCSELCSCCYDSNRSKYKRHIDLSDMRSICDTRLY 333
KES S+ R++ + + + S SC D NR K+ + + + L
Sbjct: 205 KESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKLLE 264
Query: 334 SSNKAKIKTRRRYMEAQNDSELYDLIPVKEKSSPKSRRKFAEDNIR 379
K +R R E ++ +E S +SR + + R
Sbjct: 265 ERTSRKRYSRSREREQKSYKNENSYRKYRETSKERSRDRTERERSR 310
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 9.4
Identities = 22/106 (20%), Positives = 39/106 (36%)
Query: 274 KESDFSQLSAPVCRDQEYSYNNYFGDCSELCSCCYDSNRSKYKRHIDLSDMRSICDTRLY 333
KES S+ R++ + + + S SC D NR K+ + + + L
Sbjct: 205 KESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKLLE 264
Query: 334 SSNKAKIKTRRRYMEAQNDSELYDLIPVKEKSSPKSRRKFAEDNIR 379
K +R R E ++ +E S +SR + + R
Sbjct: 265 ERTSRKRYSRSREREQKSYKNENSYRKYRETSKERSRDRTERERSR 310
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.4 bits (48), Expect = 9.4
Identities = 22/106 (20%), Positives = 39/106 (36%)
Query: 274 KESDFSQLSAPVCRDQEYSYNNYFGDCSELCSCCYDSNRSKYKRHIDLSDMRSICDTRLY 333
KES S+ R++ + + + S SC D NR K+ + + + L
Sbjct: 194 KESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKLLE 253
Query: 334 SSNKAKIKTRRRYMEAQNDSELYDLIPVKEKSSPKSRRKFAEDNIR 379
K +R R E ++ +E S +SR + + R
Sbjct: 254 ERTSRKRYSRSREREQKSYKNENSYRKYRETSKERSRDRTERERSR 299
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.313 0.128 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 297,609
Number of Sequences: 429
Number of extensions: 13456
Number of successful extensions: 47
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 33
Number of HSP's gapped (non-prelim): 17
length of query: 1007
length of database: 140,377
effective HSP length: 65
effective length of query: 942
effective length of database: 112,492
effective search space: 105967464
effective search space used: 105967464
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 48 (23.4 bits)
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