Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002832-TA|BGIBMGA002832-PA|IPR003508|Caspase-activated
nuclease CIDE-N
(501 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q28ZH3 Cluster: GA15166-PA; n=1; Drosophila pseudoobscu... 431 e-119
UniRef50_Q7Q9F1 Cluster: ENSANGP00000003838; n=3; Endopterygota|... 293 5e-78
UniRef50_Q7K304 Cluster: LD32009p; n=4; Endopterygota|Rep: LD320... 266 7e-70
UniRef50_Q5CZL3 Cluster: Dffa-prov protein; n=2; Xenopus tropica... 55 5e-06
UniRef50_UPI0000DB7E04 Cluster: PREDICTED: similar to Rep1 CG835... 47 0.001
UniRef50_Q502E9 Cluster: LOC553467 protein; n=6; Clupeocephala|R... 46 0.002
UniRef50_Q96AQ7 Cluster: Cell death activator CIDE-3; n=18; Eute... 46 0.002
UniRef50_Q6DHM1 Cluster: DNAation factor, alpha polypeptide; n=4... 45 0.004
UniRef50_A7SSA1 Cluster: Predicted protein; n=1; Nematostella ve... 45 0.004
UniRef50_Q0P4E5 Cluster: Si:dkey-91f15.6; n=5; Clupeocephala|Rep... 44 0.007
UniRef50_Q5I0Q7 Cluster: Cell death-inducing DNAation factor, al... 44 0.009
UniRef50_Q7Q8S8 Cluster: ENSANGP00000016940; n=2; Culicidae|Rep:... 44 0.009
UniRef50_A7RES0 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.009
UniRef50_O60543 Cluster: Cell death activator CIDE-A; n=21; Amni... 44 0.012
UniRef50_O00273 Cluster: DNA fragmentation factor subunit alpha;... 43 0.016
UniRef50_Q9UHD4 Cluster: Cell death activator CIDE-B; n=13; Ther... 43 0.022
UniRef50_Q9U786 Cluster: Drep3; n=4; Sophophora|Rep: Drep3 - Dro... 42 0.050
UniRef50_UPI0000F21416 Cluster: PREDICTED: similar to cell death... 41 0.066
UniRef50_O61464 Cluster: DNAation factor DREP-1; n=3; Sophophora... 41 0.066
UniRef50_Q9GYI3 Cluster: Collagen protein 111; n=2; Caenorhabdit... 39 0.35
UniRef50_Q0CVI1 Cluster: Predicted protein; n=6; Trichocomaceae|... 37 1.1
UniRef50_Q29A37 Cluster: GA15982-PA; n=1; Drosophila pseudoobscu... 36 1.9
UniRef50_UPI0001554FA8 Cluster: PREDICTED: similar to transcript... 36 2.5
UniRef50_UPI0000E7FA06 Cluster: PREDICTED: hypothetical protein;... 36 2.5
UniRef50_Q63ZM1 Cluster: LOC494819 protein; n=3; Xenopus|Rep: LO... 36 3.3
UniRef50_Q4SB89 Cluster: Chromosome undetermined SCAF14676, whol... 36 3.3
UniRef50_Q098U2 Cluster: Putative uncharacterized protein; n=1; ... 36 3.3
UniRef50_A3NJM6 Cluster: Putative uncharacterized protein; n=1; ... 36 3.3
UniRef50_Q12984 Cluster: Putative uncharacterized protein; n=1; ... 36 3.3
UniRef50_Q9FKK9 Cluster: Gb|AAD39291.1|AC007576_14; n=3; Arabido... 35 4.3
UniRef50_Q9C793 Cluster: Pinhead-like protein; n=9; Magnoliophyt... 35 4.3
UniRef50_Q6CRQ6 Cluster: Similar to sgd|S0006058 Saccharomyces c... 35 4.3
UniRef50_UPI0000F306D0 Cluster: UPI0000F306D0 related cluster; n... 35 5.7
UniRef50_O41980 Cluster: Putative uncharacterized protein GAMMAH... 35 5.7
UniRef50_A0PWW4 Cluster: Glycosyltransferase; n=3; Mycobacterium... 35 5.7
UniRef50_Q10I30 Cluster: Retrotransposon protein, putative, uncl... 35 5.7
UniRef50_UPI00015559A0 Cluster: PREDICTED: similar to Methionine... 34 7.6
UniRef50_UPI0000D56C3D Cluster: PREDICTED: similar to CG9414-PA;... 34 7.6
UniRef50_Q8NLC9 Cluster: Putative uncharacterized protein Cgl301... 34 7.6
UniRef50_Q3JS11 Cluster: Putative uncharacterized protein; n=1; ... 34 7.6
UniRef50_Q93SB8 Cluster: Putative uncharacterized protein; n=1; ... 34 7.6
UniRef50_Q3WI82 Cluster: Transcriptional regulatory protein, C t... 34 7.6
UniRef50_A5NYL2 Cluster: Putative uncharacterized protein precur... 34 7.6
UniRef50_A5C215 Cluster: Putative uncharacterized protein; n=2; ... 34 7.6
>UniRef50_Q28ZH3 Cluster: GA15166-PA; n=1; Drosophila
pseudoobscura|Rep: GA15166-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 431
Score = 431 bits (1063), Expect = e-119
Identities = 245/403 (60%), Positives = 267/403 (66%), Gaps = 67/403 (16%)
Query: 141 GKEKLSVAASEPVRLVLESDGTQVEDGDYWRTLPPNTVLLLLRQGERWYPTGVDVIKAAI 200
GK+KL V ASEPVR+VLE DGTQ+EDG+Y+RTL NTVLLLLRQGERWYPTGVDVIKAAI
Sbjct: 34 GKDKLGVPASEPVRVVLECDGTQIEDGEYFRTLANNTVLLLLRQGERWYPTGVDVIKAAI 93
Query: 201 SAIPKIVCETIHALELHDETPSWKIMDNKGRVTVVLHWDXXXXXXXXXXXXXXXXK--PD 258
SAIPKIVCETIHALELHDETPSWKIMDNKGRVTVVLHWD K P
Sbjct: 94 SAIPKIVCETIHALELHDETPSWKIMDNKGRVTVVLHWDHICSGLGSSNGLLSSDKYSPS 153
Query: 259 RRPSLVIQTSLDRXXXXXX---------HITVVNHDEPGP-----------------APR 292
++ L Q+SLD ITV++ + P R
Sbjct: 154 KK-GLSAQSSLDNKSVSSQSSQPRYASPQITVISDEGPASIYHPGGVVLPPGVVIPGGSR 212
Query: 293 RLSRASGSLE--------HVHTAECXXXXXXXXXX---XXDECDFHCCALHEEGRRIAVH 341
RLS+ S + HVHT EC ECDFHCCALHEEGR+IAVH
Sbjct: 213 RLSKQGSSFDSTVGVGAVHVHTPECAHHAHTPSRAGSPSTTECDFHCCALHEEGRKIAVH 272
Query: 342 KSVATSPIQDA----QPRAS-------------------PQGRPKGHVRFLDAESARRGD 378
KSVATSPIQD QP A+ KGHVRFLD +
Sbjct: 273 KSVATSPIQDGSSSPQPAATLAMSSSVMDPMLGGSGSMRRSSGTKGHVRFLDIAP----E 328
Query: 379 RDSSESETENTLVEDEAVTSEKFLLLIDQLSVDQKRHLTIKDIGIILERLSSKILDVERL 438
RDSSESETENT++ED+ T+EKFLLLIDQLSVDQKRHL+IKDIGIILERL+SKILDVERL
Sbjct: 329 RDSSESETENTVMEDDKTTTEKFLLLIDQLSVDQKRHLSIKDIGIILERLNSKILDVERL 388
Query: 439 DRESESDDCYNWTIKATIRGDALRELGVIYNGNYYAISEHPGY 481
DRESESDDCYNWTIKATIRGDALRELGVIYNGNYYAISEHPGY
Sbjct: 389 DRESESDDCYNWTIKATIRGDALRELGVIYNGNYYAISEHPGY 431
>UniRef50_Q7Q9F1 Cluster: ENSANGP00000003838; n=3;
Endopterygota|Rep: ENSANGP00000003838 - Anopheles
gambiae str. PEST
Length = 444
Score = 293 bits (720), Expect = 5e-78
Identities = 163/254 (64%), Positives = 178/254 (70%), Gaps = 37/254 (14%)
Query: 260 RPSLVIQTSLDRXXXXXX------HITVVNHDEPGP----APRRLSRASGSLE------H 303
+ SL Q S+D+ ITV+NHD+P + RRLS+ GS + H
Sbjct: 175 KKSLSTQNSIDKSSVSSQPRFPSPQITVINHDDPQSQMYHSARRLSKQGGSFDSAVGAVH 234
Query: 304 VHTAECXXXX---XXXXXXXXDECDFHCCALHEEGRRIAVHKSVATSPIQDAQPRASPQG 360
VHT EC ECDFHCCALHEEGR+IAVHK+VATSPIQD ASPQ
Sbjct: 235 VHTPECAHHAHMPTRAGSPGATECDFHCCALHEEGRKIAVHKNVATSPIQDGS--ASPQP 292
Query: 361 RP------------KGHVRFLDAESARRGDRDSSESETENTLVEDEAVTSEKFLLLIDQL 408
P KGHVRFLD +RDSSESETENT++EDE VTSEKFLLLIDQL
Sbjct: 293 PPSSLSDSRRTSTTKGHVRFLDIGP----ERDSSESETENTVMEDETVTSEKFLLLIDQL 348
Query: 409 SVDQKRHLTIKDIGIILERLSSKILDVERLDRESESDDCYNWTIKATIRGDALRELGVIY 468
SVDQKRHL+IKDIGIILERLSSKILDVERLDRESESDDCYNWTIKATIRGDALRELGVIY
Sbjct: 349 SVDQKRHLSIKDIGIILERLSSKILDVERLDRESESDDCYNWTIKATIRGDALRELGVIY 408
Query: 469 NGNYYAISEHPGYR 482
NGNYYAISEHPGY+
Sbjct: 409 NGNYYAISEHPGYK 422
Score = 192 bits (468), Expect = 2e-47
Identities = 90/99 (90%), Positives = 93/99 (93%)
Query: 141 GKEKLSVAASEPVRLVLESDGTQVEDGDYWRTLPPNTVLLLLRQGERWYPTGVDVIKAAI 200
GK+KL V ASEPVRLVLE DGTQVEDG+Y+RTL NTVLLLLRQGERWYPTGVDVIKAAI
Sbjct: 36 GKDKLGVPASEPVRLVLECDGTQVEDGEYFRTLANNTVLLLLRQGERWYPTGVDVIKAAI 95
Query: 201 SAIPKIVCETIHALELHDETPSWKIMDNKGRVTVVLHWD 239
SAIPKIVCETIHALEL DETPSWKIMDNKGRVTVVLHWD
Sbjct: 96 SAIPKIVCETIHALELQDETPSWKIMDNKGRVTVVLHWD 134
>UniRef50_Q7K304 Cluster: LD32009p; n=4; Endopterygota|Rep: LD32009p
- Drosophila melanogaster (Fruit fly)
Length = 482
Score = 266 bits (653), Expect = 7e-70
Identities = 140/208 (67%), Positives = 149/208 (71%), Gaps = 32/208 (15%)
Query: 303 HVHTAECXXXXXXXXXX---XXDECDFHCCALHEEGRRIAVHKSVATSPIQDAQPRASPQ 359
HVHT EC ECDFHCCALHEEGR+IAVHKSVATSPIQD PQ
Sbjct: 257 HVHTPECAHHAHTPSRAGSPSTTECDFHCCALHEEGRKIAVHKSVATSPIQDGSSSPQPQ 316
Query: 360 GRP-------------------------KGHVRFLDAESARRGDRDSSESETENTLVEDE 394
P KGHVRFLD +RDSSESETENT++ED+
Sbjct: 317 SAPSVMDPMLGGSGGGGSGSMQRRSSGAKGHVRFLDIAP----ERDSSESETENTVMEDD 372
Query: 395 AVTSEKFLLLIDQLSVDQKRHLTIKDIGIILERLSSKILDVERLDRESESDDCYNWTIKA 454
T+EKFLLLIDQLSVDQKRHL+IKDIGIILERL+SKILDVERLDRESESDDCYNWTIKA
Sbjct: 373 KTTTEKFLLLIDQLSVDQKRHLSIKDIGIILERLNSKILDVERLDRESESDDCYNWTIKA 432
Query: 455 TIRGDALRELGVIYNGNYYAISEHPGYR 482
TIRGDALRELGVIYNGNYYAISEHPGY+
Sbjct: 433 TIRGDALRELGVIYNGNYYAISEHPGYK 460
Score = 194 bits (472), Expect = 6e-48
Identities = 89/99 (89%), Positives = 94/99 (94%)
Query: 141 GKEKLSVAASEPVRLVLESDGTQVEDGDYWRTLPPNTVLLLLRQGERWYPTGVDVIKAAI 200
GK+KL V ASEPVR+VLE DGTQ+EDG+Y+RTL NTVLLLLRQGERWYPTGVDVIKAAI
Sbjct: 37 GKDKLGVPASEPVRVVLECDGTQIEDGEYFRTLANNTVLLLLRQGERWYPTGVDVIKAAI 96
Query: 201 SAIPKIVCETIHALELHDETPSWKIMDNKGRVTVVLHWD 239
SAIPKIVCETIHALELHDETPSWKIMDNKGRVTVVLHWD
Sbjct: 97 SAIPKIVCETIHALELHDETPSWKIMDNKGRVTVVLHWD 135
>UniRef50_Q5CZL3 Cluster: Dffa-prov protein; n=2; Xenopus
tropicalis|Rep: Dffa-prov protein - Xenopus tropicalis
(Western clawed frog) (Silurana tropicalis)
Length = 315
Score = 54.8 bits (126), Expect = 5e-06
Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 143 EKLSVAAS-EPVRLVLESDGTQVEDGDYWRTLPPNTVLLLLRQGERWYPTGVD 194
+K S+ +S EP+ LVL DGT VED DY+ LPPNT ++L ++W PT +D
Sbjct: 50 KKFSLDSSVEPITLVLAEDGTIVEDEDYFLCLPPNTKFVILTGNKKWAPTTLD 102
>UniRef50_UPI0000DB7E04 Cluster: PREDICTED: similar to Rep1
CG8357-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to Rep1 CG8357-PA - Apis mellifera
Length = 204
Score = 46.8 bits (106), Expect = 0.001
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 142 KEKLSVAASEPVRLVLESDGTQVEDGDYWRTLPPNTVLLLLRQGERWYPTG 192
+ +LS+ V +VLE DGT+V+D +Y+ TL NT L++L ++W G
Sbjct: 41 RNRLSLPLDAEVTIVLEQDGTEVDDEEYFATLERNTSLMVLYGNQKWVAAG 91
>UniRef50_Q502E9 Cluster: LOC553467 protein; n=6; Clupeocephala|Rep:
LOC553467 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 247
Score = 46.4 bits (105), Expect = 0.002
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 7/114 (6%)
Query: 83 RSAGAHRALSVTHITSTPQIDTQFTPSPSFFYRMWAAAGKPLSSCTSVLSKNDSRDTGGK 142
R AG + +ST +++T + S R+W+ +P C+ G
Sbjct: 22 REAGEQTEVEKNRGSST-KMETTSSLFKSVSRRVWSPPQRPFRVCSWNREVKKGITAGTL 80
Query: 143 EKLSVAA------SEPVRLVLESDGTQVEDGDYWRTLPPNTVLLLLRQGERWYP 190
E+L A S + LV E DGT+V+ ++ LP NTV + L+ GE W P
Sbjct: 81 EELKERAGQALLISNMLTLVCEEDGTEVDSDEFLIALPDNTVFMCLQPGEIWKP 134
>UniRef50_Q96AQ7 Cluster: Cell death activator CIDE-3; n=18;
Euteleostomi|Rep: Cell death activator CIDE-3 - Homo
sapiens (Human)
Length = 238
Score = 46.4 bits (105), Expect = 0.002
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 149 ASEPVRLVLESDGTQVEDGDYWRTLPPNTVLLLLRQGERWYP 190
A +P LVLE DGT VE +Y++ L +TV ++L++G++W P
Sbjct: 77 ADKPFFLVLEEDGTTVETEEYFQALAGDTVFMVLQKGQKWQP 118
>UniRef50_Q6DHM1 Cluster: DNAation factor, alpha polypeptide; n=4;
Clupeocephala|Rep: DNAation factor, alpha polypeptide -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 305
Score = 45.2 bits (102), Expect = 0.004
Identities = 23/48 (47%), Positives = 27/48 (56%)
Query: 141 GKEKLSVAASEPVRLVLESDGTQVEDGDYWRTLPPNTVLLLLRQGERW 188
G E L S V +VLE+DGT VED Y+ LP NT +LL E W
Sbjct: 32 GAESLGFCPSASVSVVLENDGTIVEDEAYFMCLPANTKFMLLDANEIW 79
>UniRef50_A7SSA1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 199
Score = 45.2 bits (102), Expect = 0.004
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 141 GKEKLSVAASEPVRLVLESDGTQVEDGDYWRTLPPNTVLLLLRQGERW 188
G EKL++A R+ LE DGT+V+D +Y+ LP T L+L+ G W
Sbjct: 36 GSEKLNIARD--CRVFLEEDGTEVDDEEYFSFLPDQTKLMLVEPGSSW 81
>UniRef50_Q0P4E5 Cluster: Si:dkey-91f15.6; n=5; Clupeocephala|Rep:
Si:dkey-91f15.6 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 239
Score = 44.4 bits (100), Expect = 0.007
Identities = 17/36 (47%), Positives = 28/36 (77%)
Query: 155 LVLESDGTQVEDGDYWRTLPPNTVLLLLRQGERWYP 190
LVL+ DGT ++ D+++TL NTVL++L +G++W P
Sbjct: 77 LVLDEDGTGIDTQDFFQTLKDNTVLMVLGKGQKWAP 112
>UniRef50_Q5I0Q7 Cluster: Cell death-inducing DNAation factor, alpha
subunit-like effector B; n=3; Xenopus|Rep: Cell
death-inducing DNAation factor, alpha subunit-like
effector B - Xenopus tropicalis (Western clawed frog)
(Silurana tropicalis)
Length = 219
Score = 44.0 bits (99), Expect = 0.009
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 153 VRLVLESDGTQVEDGDYWRTLPPNTVLLLLRQGERWYP 190
V LVLE DGTQ++ D++ TL +V+++L +G++W P
Sbjct: 73 VSLVLEDDGTQLDREDFFETLEDGSVVMVLEKGQKWMP 110
>UniRef50_Q7Q8S8 Cluster: ENSANGP00000016940; n=2; Culicidae|Rep:
ENSANGP00000016940 - Anopheles gambiae str. PEST
Length = 164
Score = 44.0 bits (99), Expect = 0.009
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 157 LESDGTQVEDGDYWRTLPPNTVLLLLRQGERW 188
L+SDGT+V+D DY++TL PN L+ + GE+W
Sbjct: 40 LDSDGTEVDDEDYFQTLEPNAELIAVFSGEQW 71
>UniRef50_A7RES0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 286
Score = 44.0 bits (99), Expect = 0.009
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 160 DGTQVEDGDYWRTLPPNTVLLLLRQGERW 188
DGT VED DY+ TLPP TVL+++R E W
Sbjct: 3 DGTDVEDEDYFDTLPPQTVLVIVRPDEDW 31
>UniRef50_O60543 Cluster: Cell death activator CIDE-A; n=21;
Amniota|Rep: Cell death activator CIDE-A - Homo sapiens
(Human)
Length = 219
Score = 43.6 bits (98), Expect = 0.012
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 147 VAASEPVRLVLESDGTQVEDGDYWRTLPPNTVLLLLRQGERWYP 190
V A+ V LVLE DGT V+ ++++TL NT ++L +G++W P
Sbjct: 67 VIATGLVTLVLEEDGTVVDTEEFFQTLGDNTHFMILEKGQKWMP 110
>UniRef50_O00273 Cluster: DNA fragmentation factor subunit alpha;
n=29; Amniota|Rep: DNA fragmentation factor subunit
alpha - Homo sapiens (Human)
Length = 331
Score = 43.2 bits (97), Expect = 0.016
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 152 PVRLVLESDGTQVEDGDYWRTLPPNTVLLLLRQGERW 188
PV LVL DGT V+D DY+ LP NT + L E+W
Sbjct: 58 PVTLVLAEDGTIVDDDDYFLCLPSNTKFVALASNEKW 94
>UniRef50_Q9UHD4 Cluster: Cell death activator CIDE-B; n=13;
Theria|Rep: Cell death activator CIDE-B - Homo sapiens
(Human)
Length = 219
Score = 42.7 bits (96), Expect = 0.022
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 109 SPSFFYRMWAAAG---KPLSSCTSVLSKNDSRDTGGKEKLSVAASEPV------RLVLES 159
S F R+W +A +P C + +++L A E + LVLE
Sbjct: 20 SSEFGRRVWTSAPPPQRPFRVCDHKRTIRKGLTAATRQELLAKALETLLLNGVLTLVLEE 79
Query: 160 DGTQVEDGDYWRTLPPNTVLLLLRQGERWYPTGVDVI 196
DGT V+ D+++ L +T L++L+ G+ W PT V+
Sbjct: 80 DGTAVDSEDFFQLLEDDTCLMVLQSGQSWSPTRSGVL 116
>UniRef50_Q9U786 Cluster: Drep3; n=4; Sophophora|Rep: Drep3 -
Drosophila melanogaster (Fruit fly)
Length = 266
Score = 41.5 bits (93), Expect = 0.050
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 154 RLVLESDGTQVEDGDYWRTLPPNTVLLLLRQGERW 188
RL L+ DGT+V+D +Y+ TL PN L+ + GE+W
Sbjct: 156 RLHLDCDGTEVDDEEYFSTLEPNAELIAVFPGEQW 190
>UniRef50_UPI0000F21416 Cluster: PREDICTED: similar to cell death
activator CIDE-A; n=2; Danio rerio|Rep: PREDICTED:
similar to cell death activator CIDE-A - Danio rerio
Length = 179
Score = 41.1 bits (92), Expect = 0.066
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 149 ASEPVRLVLESDGTQVEDGDYWRTLPPNTVLLLLRQGERWYPT 191
A + + LVLE DGT V+ ++++LP NT ++L +G+ W P+
Sbjct: 42 ACQMLTLVLEDDGTVVDSEAFFQSLPTNTPFMVLEKGDVWTPS 84
>UniRef50_O61464 Cluster: DNAation factor DREP-1; n=3;
Sophophora|Rep: DNAation factor DREP-1 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 41.1 bits (92), Expect = 0.066
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 157 LESDGTQVEDGDYWRTLPPNTVLLLLRQGERW 188
L+SDGT+++D +Y+RTL NT L+ + GE W
Sbjct: 54 LDSDGTEIDDEEYFRTLDENTELVAVFPGEHW 85
>UniRef50_Q9GYI3 Cluster: Collagen protein 111; n=2;
Caenorhabditis|Rep: Collagen protein 111 -
Caenorhabditis elegans
Length = 332
Score = 38.7 bits (86), Expect = 0.35
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 27 INGNANFKILRHQEITGSRCIAGP-GRCGARGAVGE--VRGCGGRGTRPGHDSRPVRPPR 83
++G+ K++R+ + T +C AGP G GA G+VGE +G G G RPG+ RP PP
Sbjct: 127 MSGSELTKMMRNDD-TCIKCPAGPPGPRGAPGSVGEPGPQGRDGMGGRPGNMGRP-GPPG 184
Query: 84 SAG 86
AG
Sbjct: 185 PAG 187
>UniRef50_Q0CVI1 Cluster: Predicted protein; n=6;
Trichocomaceae|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 271
Score = 37.1 bits (82), Expect = 1.1
Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 336 RRIAVHKSVATSPIQD-----AQPRASPQGRPKGHVRFLDAESARRGDRDSSESETENTL 390
RR + + +SP Q A+P PQ + V +A S + R ++ES+ T
Sbjct: 141 RRPSTATATTSSPPQSSAHPVARPSPPPQPAHEDTVELQNALSREQNLRRAAESQLSQTT 200
Query: 391 VEDEAVTSEKFLLLIDQLSVDQKRHLTIKDIGIILERLSSKILDVERLDRESESDDCY 448
E E +T++ F + ++ ++K +++ +LER DVE++++ +CY
Sbjct: 201 TELEELTAQLFSQANEMVAQERKARARLEERVALLER-----CDVEKVEQTRVDGNCY 253
>UniRef50_Q29A37 Cluster: GA15982-PA; n=1; Drosophila
pseudoobscura|Rep: GA15982-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 604
Score = 36.3 bits (80), Expect = 1.9
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 336 RRIAVHKSVATSPIQDAQPRASPQGRPKGHVRFLD 370
RR+A+H S +SPI+ +Q SPQG RFLD
Sbjct: 527 RRMAIHGSYYSSPIEISQSEKSPQGNNNDFRRFLD 561
>UniRef50_UPI0001554FA8 Cluster: PREDICTED: similar to transcription
termination factor, RNA polymerase II, partial; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
transcription termination factor, RNA polymerase II,
partial - Ornithorhynchus anatinus
Length = 770
Score = 35.9 bits (79), Expect = 2.5
Identities = 34/128 (26%), Positives = 46/128 (35%), Gaps = 7/128 (5%)
Query: 29 GNANFKILRHQEITGSRCIAGPGRCGARGAVGEVRGCGG-----RGTRPGHDSRPVRPPR 83
G +F R + + G+ G G G R G RG GH +RP+RPPR
Sbjct: 56 GGGDFSRRRGRPLAGTGPGTATGTSGPGPGSGPTRERSGSLPAPRGFPRGHGARPLRPPR 115
Query: 84 SAGAHRALSVTHITSTPQ-IDTQFTPSPSFFYRMWAAAGKPLSSCTSV-LSKNDSRDTGG 141
+H + + + Q FYR G+ C SV D RD
Sbjct: 116 VPASHCLIHENSVVELQALLQPQSKKEYRLFYRCSQGRGEKQHWCGSVPWQSPDVRDLTK 175
Query: 142 KEKLSVAA 149
E+ AA
Sbjct: 176 TEQAQGAA 183
>UniRef50_UPI0000E7FA06 Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 98
Score = 35.9 bits (79), Expect = 2.5
Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 48 AGPGRCGARGAVGEVRGCGGRGTRPG-HDSRPVRPPRSAGA 87
A PG CGA G VG+ RG GGR P S R PR A
Sbjct: 35 AAPGGCGAFGQVGQRRGAGGRPRSPARRRSGGTRLPRGGPA 75
>UniRef50_Q63ZM1 Cluster: LOC494819 protein; n=3; Xenopus|Rep:
LOC494819 protein - Xenopus laevis (African clawed frog)
Length = 221
Score = 35.5 bits (78), Expect = 3.3
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 150 SEPVRLVLESDGTQVEDGDYWRTLPPNTVLLLLRQGERW 188
S+ LVLE DGT V+ +++++L NT +LL ++W
Sbjct: 77 SDLATLVLEEDGTVVDTEEFFQSLEDNTEFMLLEAKQKW 115
>UniRef50_Q4SB89 Cluster: Chromosome undetermined SCAF14676, whole
genome shotgun sequence; n=4; Percomorpha|Rep:
Chromosome undetermined SCAF14676, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1399
Score = 35.5 bits (78), Expect = 3.3
Identities = 25/52 (48%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 43 GSRCIAG-PGRCGARGAVGEVRGCGGRGTRPGHDSRPVRPPRSAGAHRALSV 93
G R G PG GARGA GE G GGRG PG D P P + G A V
Sbjct: 418 GKRGARGEPGPAGARGAPGERGGPGGRGF-PGADG-PAGPKGATGERGAPGV 467
>UniRef50_Q098U2 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 173
Score = 35.5 bits (78), Expect = 3.3
Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 43 GSRCIAGPGRCGARGAVGEVRGCGGRGTRPGHDSRPVRPPRSAGAHR 89
G C AGP R G+RGA G R C GR R R R R++ R
Sbjct: 117 GGCCPAGPCRAGSRGAAGPTRRCRGRCPRRRRAPR-ARTSRTSAPRR 162
>UniRef50_A3NJM6 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 668|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 668)
Length = 118
Score = 35.5 bits (78), Expect = 3.3
Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 25 KCINGNANFKILRHQEITGSRCIA----GPGRCGARGAVGEVRGCGG---RGTRPGHD-S 76
+C N +++R +R IA G GR A+ A E R CGG RG GHD +
Sbjct: 45 RCSTPLGNARVVRFTSFDPARRIADAEGGRGR-RAKAARAERRACGGRRDRGRAGGHDRA 103
Query: 77 RPVRPPRSAGAHR 89
R R PR+A A R
Sbjct: 104 RRARAPRAAHARR 116
>UniRef50_Q12984 Cluster: Putative uncharacterized protein; n=1;
Homo sapiens|Rep: Putative uncharacterized protein -
Homo sapiens (Human)
Length = 404
Score = 35.5 bits (78), Expect = 3.3
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 48 AGPGRCGARGAVGEVRGCGG-RGTRPGHDSRPVRPPRSAGAHR 89
A PG G G+ G G R RP D++P PPR AGA R
Sbjct: 60 ARPGALAVSGPAGQPPGQGPQRPRRPAKDAQPAPPPRPAGATR 102
>UniRef50_Q9FKK9 Cluster: Gb|AAD39291.1|AC007576_14; n=3;
Arabidopsis thaliana|Rep: Gb|AAD39291.1|AC007576_14 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 226
Score = 35.1 bits (77), Expect = 4.3
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 373 SARRGDRDSSESETENTLVEDEAVTSEKFLLLIDQLSVDQKRHLTIKDIGIILERLSSKI 432
S +GD D E+ TL+ED+ E L DQ+ V + + L I+D G + SK
Sbjct: 17 STNQGDGDD---ESPRTLIEDQRDVEESKTLSEDQVDVKESKTL-IEDQG---DEEESKT 69
Query: 433 LDVERLDRESESDDC 447
LD + + E ES +C
Sbjct: 70 LDEDLDETEEESGEC 84
>UniRef50_Q9C793 Cluster: Pinhead-like protein; n=9;
Magnoliophyta|Rep: Pinhead-like protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 990
Score = 35.1 bits (77), Expect = 4.3
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 123 PLSSCTSVLSKNDSRDTGGKEKLSVAASEPVRLVLESDG-TQVEDGDYWRTLPPNTV 178
P+ SC +V++ D R+ ++K+ ++LV + DG Q ++G+ W LPP +
Sbjct: 243 PIPSCKAVMNYGDLREKQPQKKIEKLFRVNMKLVSKFDGKEQRKEGEDWAPLPPEYI 299
>UniRef50_Q6CRQ6 Cluster: Similar to sgd|S0006058 Saccharomyces
cerevisiae YPL137c; n=1; Kluyveromyces lactis|Rep:
Similar to sgd|S0006058 Saccharomyces cerevisiae YPL137c
- Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 1278
Score = 35.1 bits (77), Expect = 4.3
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 344 VATSPIQDAQPRA-SPQGRPKGHVRFLDAESARRGDRDSSESETENTLVEDEAVTSE 399
+ P DA+P SP GRP G+V + SA+ + SE+E++ VEDE T +
Sbjct: 1203 IQVEPPADAKPLVLSPGGRPDGNVSHDERHSAQ---ENGFPSESEDSYVEDETTTEQ 1256
>UniRef50_UPI0000F306D0 Cluster: UPI0000F306D0 related cluster; n=1;
Bos taurus|Rep: UPI0000F306D0 UniRef100 entry - Bos
Taurus
Length = 888
Score = 34.7 bits (76), Expect = 5.7
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 50 PGRCGARGAVGEVRGCGGRGTRPGHDSRPVRPPRSAGAHR 89
PGR G G G G GR RPG RP RP S G+ R
Sbjct: 716 PGRSGRSGRPGGSEG-SGRPERPGGSGRPGRPGGSGGSGR 754
>UniRef50_O41980 Cluster: Putative uncharacterized protein
GAMMAHV.M13; n=1; Murid herpesvirus 4|Rep: Putative
uncharacterized protein GAMMAHV.M13 - Murid herpesvirus
4 (MuHV-4) (Murine gammaherpesvirus 68)
Length = 212
Score = 34.7 bits (76), Expect = 5.7
Identities = 22/39 (56%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 43 GSRCI-AGPGRCGARGAVGEVRG--CGGRGTRPGHDSRP 78
GS C+ AGPG G RGA RG GGRGT G D RP
Sbjct: 159 GSGCLWAGPGGAGVRGAGVSSRGPPAGGRGTVSG-DPRP 196
>UniRef50_A0PWW4 Cluster: Glycosyltransferase; n=3;
Mycobacterium|Rep: Glycosyltransferase - Mycobacterium
ulcerans (strain Agy99)
Length = 402
Score = 34.7 bits (76), Expect = 5.7
Identities = 24/104 (23%), Positives = 39/104 (37%)
Query: 54 GARGAVGEVRGCGGRGTRPGHDSRPVRPPRSAGAHRALSVTHITSTPQIDTQFTPSPSFF 113
G+RG V R GH+ R PP G + +T + P Q P+P+
Sbjct: 9 GSRGDVEPCAAAARELLRRGHEVRVAAPPNLVGFLESAGLTTVAYGPDSHQQMGPAPNLV 68
Query: 114 YRMWAAAGKPLSSCTSVLSKNDSRDTGGKEKLSVAASEPVRLVL 157
+ A A P++ ++ + E L+ A LV+
Sbjct: 69 GDLAATAQHPITMVPKLIEHLTRVNAAKSETLTALADGADLLVV 112
>UniRef50_Q10I30 Cluster: Retrotransposon protein, putative,
unclassified; n=4; Oryza sativa|Rep: Retrotransposon
protein, putative, unclassified - Oryza sativa subsp.
japonica (Rice)
Length = 879
Score = 34.7 bits (76), Expect = 5.7
Identities = 26/54 (48%), Positives = 28/54 (51%), Gaps = 8/54 (14%)
Query: 43 GSRCIAGPGRCGARGAVGEVRGCGG------RGTRPGHDSRPVRPPRSAGAHRA 90
GSR GPG G+R A G RG GG +G R SRP PPR GA RA
Sbjct: 207 GSRA-GGPGGGGSR-APGSSRGPGGDSAGDPKGKRKVTYSRPPSPPRVGGAERA 258
>UniRef50_UPI00015559A0 Cluster: PREDICTED: similar to
Methionine-tRNA synthetase, partial; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
Methionine-tRNA synthetase, partial - Ornithorhynchus
anatinus
Length = 761
Score = 34.3 bits (75), Expect = 7.6
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 13 LKSLYFPFESFGKCINGNANFKILRHQEITGSRCIAGPGRC-GARGAVG-EVRGCGGRGT 70
+++LY+ ++ G+ G+A + + + + G R P RC GA G VG EVRG G
Sbjct: 23 IRALYYGRQT-GEAQQGSARDALAQARGLCGFRDF--PFRCLGAHGIVGFEVRGASGAAA 79
Query: 71 RPGHDSRPVRPPRSAGAHR 89
PG + PR A R
Sbjct: 80 VPGRRTTSPGGPRGAAPAR 98
>UniRef50_UPI0000D56C3D Cluster: PREDICTED: similar to CG9414-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG9414-PA - Tribolium castaneum
Length = 330
Score = 34.3 bits (75), Expect = 7.6
Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 152 PVRLVLES-DGTQVEDGDYWRTLPPNTVLLLLRQGERWYPTGVDVIKAAISAI 203
P + L++ DGT VE+ +Y++TL T+L+ ++ GE+ PT +++ I +
Sbjct: 41 PDEIFLQTQDGTLVENDEYFQTLHAQTLLIWVKNGEK-APTDAEILYKTIREV 92
>UniRef50_Q8NLC9 Cluster: Putative uncharacterized protein Cgl3013;
n=2; Corynebacterium glutamicum|Rep: Putative
uncharacterized protein Cgl3013 - Corynebacterium
glutamicum (Brevibacterium flavum)
Length = 501
Score = 34.3 bits (75), Expect = 7.6
Identities = 17/63 (26%), Positives = 27/63 (42%)
Query: 92 SVTHITSTPQIDTQFTPSPSFFYRMWAAAGKPLSSCTSVLSKNDSRDTGGKEKLSVAASE 151
+ T +T ++ + P + YR+ A G+ L V+ D G +KL VA
Sbjct: 279 NATELTPGEGVEAEIVPGENHVYRLPMATGQQLHGFVEVVENTAPDDPGVTDKLGVAVYS 338
Query: 152 PVR 154
P R
Sbjct: 339 PTR 341
>UniRef50_Q3JS11 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 1710b|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 1710b)
Length = 776
Score = 34.3 bits (75), Expect = 7.6
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 330 ALHEEGRRIAVHKSVATSPIQDAQPRASPQGRPKGHVRFLDAESARRGDR 379
A H +GRRIA AT A P + P HVR A+ AR GDR
Sbjct: 83 ARHADGRRIAGRPRTATPA---AMPATEARDAPLRHVRLQRAQPARDGDR 129
>UniRef50_Q93SB8 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. ArI3|Rep: Putative uncharacterized protein -
Frankia sp. ArI3
Length = 175
Score = 34.3 bits (75), Expect = 7.6
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
Query: 35 ILRH-QEITGSRCIAGPGR-----CGARGAVGEVRGCGGRGTRPGHDSRPVRPPR 83
+ RH + +T RC AG GR CG RG G V C R G + P RPPR
Sbjct: 65 VARHDRHVTIVRCSAGGGRGDVDGCGRRG--GGVAACRPRAGPAGTGAVPARPPR 117
>UniRef50_Q3WI82 Cluster: Transcriptional regulatory protein, C
terminal:Bacterial transcriptional activator domain
precursor; n=1; Frankia sp. EAN1pec|Rep: Transcriptional
regulatory protein, C terminal:Bacterial transcriptional
activator domain precursor - Frankia sp. EAN1pec
Length = 445
Score = 34.3 bits (75), Expect = 7.6
Identities = 22/44 (50%), Positives = 22/44 (50%), Gaps = 8/44 (18%)
Query: 51 GRCGARGA-VGEVRGCGGRGTRP-------GHDSRPVRPPRSAG 86
GR G GA VGE GC GRG RP G RP RPP G
Sbjct: 402 GRAGWEGARVGEAGGCRGRGERPPGTGCRGGGRLRPGRPPGRVG 445
>UniRef50_A5NYL2 Cluster: Putative uncharacterized protein
precursor; n=1; Methylobacterium sp. 4-46|Rep: Putative
uncharacterized protein precursor - Methylobacterium sp.
4-46
Length = 1337
Score = 34.3 bits (75), Expect = 7.6
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 37 RHQEITGSRCIAGPGRCGARGAVGEVRGCGG--RG--TRPGHDS-RPVRPPRSAGAHRAL 91
RH++ + PGR RG +G G GG RG R GH R VRP +AGA AL
Sbjct: 218 RHRDRVARQAPRLPGRRRLRGRLGAAEGAGGHPRGPARRDGHPGRRHVRPLDAAGAGAAL 277
>UniRef50_A5C215 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 617
Score = 34.3 bits (75), Expect = 7.6
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 3 HKFQLR-NFVLLKSLYFPFESFGKCIN-GNANFKILRHQEITGSRCIAGPGRCGAR--GA 58
H LR N + + L+ P++S GK IN N +F++L H++I +R P R + G
Sbjct: 395 HFMSLRSNSRMRRVLWNPWQSNGKLINMKNRSFEVLCHKQIRNARSKRCPDRASGQDGGX 454
Query: 59 VGEVRGC 65
V GC
Sbjct: 455 TWSVAGC 461
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.135 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 539,551,725
Number of Sequences: 1657284
Number of extensions: 22427800
Number of successful extensions: 61804
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 61738
Number of HSP's gapped (non-prelim): 75
length of query: 501
length of database: 575,637,011
effective HSP length: 104
effective length of query: 397
effective length of database: 403,279,475
effective search space: 160101951575
effective search space used: 160101951575
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 75 (34.3 bits)
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