GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002832-TA|BGIBMGA002832-PA|IPR003508|Caspase-activated
nuclease CIDE-N
         (501 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    25   4.7  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              25   6.2  
AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative apyrase/n...    24   8.2  
AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5' nucleo...    24   8.2  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     24   8.2  

>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 25.0 bits (52), Expect = 4.7
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 2/34 (5%)

Query: 42  TGSRCIAGPGRCGARGAVGEVRGCGGRG--TRPG 73
           +GS   +  G C   GA      CGG G  TRPG
Sbjct: 419 SGSSNGSNGGGCNGSGADQRTHYCGGAGCETRPG 452


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 24.6 bits (51), Expect = 6.2
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 54  GARGAVGEVRGCGGRGTRPGHDSRPVRP-PRSAGAHRALSVTHITSTP 100
           GAR     + G GG     G   R +RP  RS   +R  ++    STP
Sbjct: 11  GARNVETNMSGLGGDAHPQGSSGRVLRPRARSVSLNRVDALKVSDSTP 58


>AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 568

 Score = 24.2 bits (50), Expect = 8.2
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 328 CCALHEEGRRIAVHKSV--ATSPIQDAQPRASPQ 359
           CCAL   GR   +H+SV  A+  +   QP  S Q
Sbjct: 11  CCALAVVGRCTVLHQSVDSASGVLIAKQPSVSEQ 44


>AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 568

 Score = 24.2 bits (50), Expect = 8.2
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 328 CCALHEEGRRIAVHKSV--ATSPIQDAQPRASPQ 359
           CCAL   GR   +H+SV  A+  +   QP  S Q
Sbjct: 11  CCALAVVGRCTVLHQSVDSASGVLIAKQPSVSEQ 44


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 24.2 bits (50), Expect = 8.2
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 8/65 (12%)

Query: 329 CALHEEGRRIAVHKSVATSPIQDAQPRASPQGRPKGHVRFLDAESARRGDRDSSESETEN 388
           C +      IAV  S AT P+        P+G+P+        +  +R D DSS SE+  
Sbjct: 4   CLIFLAAATIAV-ASAATGPLFLPHFGQGPRGQPQ-------RQQVQRSDSDSSSSESSQ 55

Query: 389 TLVED 393
           +  +D
Sbjct: 56  SSDDD 60


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.135    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,971
Number of Sequences: 2123
Number of extensions: 19793
Number of successful extensions: 39
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 39
Number of HSP's gapped (non-prelim): 6
length of query: 501
length of database: 516,269
effective HSP length: 67
effective length of query: 434
effective length of database: 374,028
effective search space: 162328152
effective search space used: 162328152
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 50 (24.2 bits)