Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002832-TA|BGIBMGA002832-PA|IPR003508|Caspase-activated
nuclease CIDE-N
(501 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060935-1|AAL28483.1| 360|Drosophila melanogaster GM07741p pro... 266 4e-71
AY060400-1|AAL25439.1| 482|Drosophila melanogaster LD32009p pro... 266 4e-71
AE013599-846|AAF58954.1| 482|Drosophila melanogaster CG1975-PA ... 266 4e-71
AF149795-1|AAF03218.1| 481|Drosophila melanogaster Drep2 protein. 264 2e-70
AF149796-1|AAF03219.1| 266|Drosophila melanogaster Drep3 protein. 42 0.003
BT010245-1|AAQ23563.1| 297|Drosophila melanogaster RE40745p pro... 41 0.003
AF041375-1|AAC34984.1| 299|Drosophila melanogaster DNA fragment... 41 0.003
AE013599-1388|AAF58589.1| 297|Drosophila melanogaster CG8357-PA... 41 0.003
AE013599-1391|AAF58588.2| 266|Drosophila melanogaster CG8364-PB... 40 0.008
AE013599-1390|AAF58587.1| 266|Drosophila melanogaster CG8364-PA... 40 0.008
BT015199-1|AAT94428.1| 335|Drosophila melanogaster RE69682p pro... 34 0.52
AE014298-2505|AAF48684.1| 335|Drosophila melanogaster CG13001-P... 34 0.52
AY070621-1|AAL48092.1| 380|Drosophila melanogaster RE72719p pro... 31 2.8
AE014297-1376|AAF54696.2| 380|Drosophila melanogaster CG6930-PA... 31 2.8
AE014297-1375|ABI31165.1| 447|Drosophila melanogaster CG6930-PC... 31 2.8
AE014297-1374|AAN13528.2| 447|Drosophila melanogaster CG6930-PB... 31 2.8
AY060724-1|AAL28272.1| 694|Drosophila melanogaster GH17145p pro... 31 3.7
AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1 pr... 31 3.7
AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB ... 31 3.7
AE014296-2824|AAF49397.2| 694|Drosophila melanogaster CG11915-P... 31 3.7
BT023371-1|AAY55787.1| 342|Drosophila melanogaster IP10472p pro... 30 6.4
AE014297-3144|AAF55986.1| 342|Drosophila melanogaster CG13857-P... 30 6.4
U19269-2|AAC46507.1| 1074|Drosophila melanogaster Dachshund vari... 30 8.5
AE014134-2725|AAN10943.1| 1074|Drosophila melanogaster CG4952-PD... 30 8.5
>AY060935-1|AAL28483.1| 360|Drosophila melanogaster GM07741p
protein.
Length = 360
Score = 266 bits (653), Expect = 4e-71
Identities = 140/208 (67%), Positives = 149/208 (71%), Gaps = 32/208 (15%)
Query: 303 HVHTAECXXXXXXXXXX---XXDECDFHCCALHEEGRRIAVHKSVATSPIQDAQPRASPQ 359
HVHT EC ECDFHCCALHEEGR+IAVHKSVATSPIQD PQ
Sbjct: 135 HVHTPECAHHAHTPSRAGSPSTTECDFHCCALHEEGRKIAVHKSVATSPIQDGSSSPQPQ 194
Query: 360 GRP-------------------------KGHVRFLDAESARRGDRDSSESETENTLVEDE 394
P KGHVRFLD +RDSSESETENT++ED+
Sbjct: 195 SAPSVMDPMLGGSGGGGSGSMQRRSSGAKGHVRFLDIAP----ERDSSESETENTVMEDD 250
Query: 395 AVTSEKFLLLIDQLSVDQKRHLTIKDIGIILERLSSKILDVERLDRESESDDCYNWTIKA 454
T+EKFLLLIDQLSVDQKRHL+IKDIGIILERL+SKILDVERLDRESESDDCYNWTIKA
Sbjct: 251 KTTTEKFLLLIDQLSVDQKRHLSIKDIGIILERLNSKILDVERLDRESESDDCYNWTIKA 310
Query: 455 TIRGDALRELGVIYNGNYYAISEHPGYR 482
TIRGDALRELGVIYNGNYYAISEHPGY+
Sbjct: 311 TIRGDALRELGVIYNGNYYAISEHPGYK 338
Score = 35.9 bits (79), Expect = 0.13
Identities = 14/14 (100%), Positives = 14/14 (100%)
Query: 226 MDNKGRVTVVLHWD 239
MDNKGRVTVVLHWD
Sbjct: 1 MDNKGRVTVVLHWD 14
>AY060400-1|AAL25439.1| 482|Drosophila melanogaster LD32009p
protein.
Length = 482
Score = 266 bits (653), Expect = 4e-71
Identities = 140/208 (67%), Positives = 149/208 (71%), Gaps = 32/208 (15%)
Query: 303 HVHTAECXXXXXXXXXX---XXDECDFHCCALHEEGRRIAVHKSVATSPIQDAQPRASPQ 359
HVHT EC ECDFHCCALHEEGR+IAVHKSVATSPIQD PQ
Sbjct: 257 HVHTPECAHHAHTPSRAGSPSTTECDFHCCALHEEGRKIAVHKSVATSPIQDGSSSPQPQ 316
Query: 360 GRP-------------------------KGHVRFLDAESARRGDRDSSESETENTLVEDE 394
P KGHVRFLD +RDSSESETENT++ED+
Sbjct: 317 SAPSVMDPMLGGSGGGGSGSMQRRSSGAKGHVRFLDIAP----ERDSSESETENTVMEDD 372
Query: 395 AVTSEKFLLLIDQLSVDQKRHLTIKDIGIILERLSSKILDVERLDRESESDDCYNWTIKA 454
T+EKFLLLIDQLSVDQKRHL+IKDIGIILERL+SKILDVERLDRESESDDCYNWTIKA
Sbjct: 373 KTTTEKFLLLIDQLSVDQKRHLSIKDIGIILERLNSKILDVERLDRESESDDCYNWTIKA 432
Query: 455 TIRGDALRELGVIYNGNYYAISEHPGYR 482
TIRGDALRELGVIYNGNYYAISEHPGY+
Sbjct: 433 TIRGDALRELGVIYNGNYYAISEHPGYK 460
Score = 194 bits (472), Expect = 3e-49
Identities = 89/99 (89%), Positives = 94/99 (94%)
Query: 141 GKEKLSVAASEPVRLVLESDGTQVEDGDYWRTLPPNTVLLLLRQGERWYPTGVDVIKAAI 200
GK+KL V ASEPVR+VLE DGTQ+EDG+Y+RTL NTVLLLLRQGERWYPTGVDVIKAAI
Sbjct: 37 GKDKLGVPASEPVRVVLECDGTQIEDGEYFRTLANNTVLLLLRQGERWYPTGVDVIKAAI 96
Query: 201 SAIPKIVCETIHALELHDETPSWKIMDNKGRVTVVLHWD 239
SAIPKIVCETIHALELHDETPSWKIMDNKGRVTVVLHWD
Sbjct: 97 SAIPKIVCETIHALELHDETPSWKIMDNKGRVTVVLHWD 135
>AE013599-846|AAF58954.1| 482|Drosophila melanogaster CG1975-PA
protein.
Length = 482
Score = 266 bits (653), Expect = 4e-71
Identities = 140/208 (67%), Positives = 149/208 (71%), Gaps = 32/208 (15%)
Query: 303 HVHTAECXXXXXXXXXX---XXDECDFHCCALHEEGRRIAVHKSVATSPIQDAQPRASPQ 359
HVHT EC ECDFHCCALHEEGR+IAVHKSVATSPIQD PQ
Sbjct: 257 HVHTPECAHHAHTPSRAGSPSTTECDFHCCALHEEGRKIAVHKSVATSPIQDGSSSPQPQ 316
Query: 360 GRP-------------------------KGHVRFLDAESARRGDRDSSESETENTLVEDE 394
P KGHVRFLD +RDSSESETENT++ED+
Sbjct: 317 SAPSVMDPMLGGSGGGGSGSMQRRSSGAKGHVRFLDIAP----ERDSSESETENTVMEDD 372
Query: 395 AVTSEKFLLLIDQLSVDQKRHLTIKDIGIILERLSSKILDVERLDRESESDDCYNWTIKA 454
T+EKFLLLIDQLSVDQKRHL+IKDIGIILERL+SKILDVERLDRESESDDCYNWTIKA
Sbjct: 373 KTTTEKFLLLIDQLSVDQKRHLSIKDIGIILERLNSKILDVERLDRESESDDCYNWTIKA 432
Query: 455 TIRGDALRELGVIYNGNYYAISEHPGYR 482
TIRGDALRELGVIYNGNYYAISEHPGY+
Sbjct: 433 TIRGDALRELGVIYNGNYYAISEHPGYK 460
Score = 194 bits (472), Expect = 3e-49
Identities = 89/99 (89%), Positives = 94/99 (94%)
Query: 141 GKEKLSVAASEPVRLVLESDGTQVEDGDYWRTLPPNTVLLLLRQGERWYPTGVDVIKAAI 200
GK+KL V ASEPVR+VLE DGTQ+EDG+Y+RTL NTVLLLLRQGERWYPTGVDVIKAAI
Sbjct: 37 GKDKLGVPASEPVRVVLECDGTQIEDGEYFRTLANNTVLLLLRQGERWYPTGVDVIKAAI 96
Query: 201 SAIPKIVCETIHALELHDETPSWKIMDNKGRVTVVLHWD 239
SAIPKIVCETIHALELHDETPSWKIMDNKGRVTVVLHWD
Sbjct: 97 SAIPKIVCETIHALELHDETPSWKIMDNKGRVTVVLHWD 135
>AF149795-1|AAF03218.1| 481|Drosophila melanogaster Drep2 protein.
Length = 481
Score = 264 bits (647), Expect = 2e-70
Identities = 139/208 (66%), Positives = 148/208 (71%), Gaps = 32/208 (15%)
Query: 303 HVHTAECXXXXXXXXXX---XXDECDFHCCALHEEGRRIAVHKSVATSPIQDAQPRASPQ 359
HVHT EC ECDFHCCALHEEGR+IAVHKSVATSPIQD PQ
Sbjct: 256 HVHTPECAHHAHTPSRAGSPSTTECDFHCCALHEEGRKIAVHKSVATSPIQDGSSSPQPQ 315
Query: 360 GRP-------------------------KGHVRFLDAESARRGDRDSSESETENTLVEDE 394
P KGHVRFLD +RDSSESETENT++ED+
Sbjct: 316 SAPSVMDPMLGGSGGGGSGSMQRRSSGAKGHVRFLDIAP----ERDSSESETENTVMEDD 371
Query: 395 AVTSEKFLLLIDQLSVDQKRHLTIKDIGIILERLSSKILDVERLDRESESDDCYNWTIKA 454
T+EKFLLLIDQLSVDQKRHL+IKDIGIILERL+SKILDVERLDRESESDDCYNWTIKA
Sbjct: 372 KTTTEKFLLLIDQLSVDQKRHLSIKDIGIILERLNSKILDVERLDRESESDDCYNWTIKA 431
Query: 455 TIRGDALRELGVIYNGNYYAISEHPGYR 482
TIRGDALRELGVIYN NYYAISEHPGY+
Sbjct: 432 TIRGDALRELGVIYNANYYAISEHPGYK 459
Score = 194 bits (472), Expect = 3e-49
Identities = 89/99 (89%), Positives = 94/99 (94%)
Query: 141 GKEKLSVAASEPVRLVLESDGTQVEDGDYWRTLPPNTVLLLLRQGERWYPTGVDVIKAAI 200
GK+KL V ASEPVR+VLE DGTQ+EDG+Y+RTL NTVLLLLRQGERWYPTGVDVIKAAI
Sbjct: 37 GKDKLGVPASEPVRVVLECDGTQIEDGEYFRTLANNTVLLLLRQGERWYPTGVDVIKAAI 96
Query: 201 SAIPKIVCETIHALELHDETPSWKIMDNKGRVTVVLHWD 239
SAIPKIVCETIHALELHDETPSWKIMDNKGRVTVVLHWD
Sbjct: 97 SAIPKIVCETIHALELHDETPSWKIMDNKGRVTVVLHWD 135
>AF149796-1|AAF03219.1| 266|Drosophila melanogaster Drep3 protein.
Length = 266
Score = 41.5 bits (93), Expect = 0.003
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 154 RLVLESDGTQVEDGDYWRTLPPNTVLLLLRQGERW 188
RL L+ DGT+V+D +Y+ TL PN L+ + GE+W
Sbjct: 156 RLHLDCDGTEVDDEEYFSTLEPNAELIAVFPGEQW 190
>BT010245-1|AAQ23563.1| 297|Drosophila melanogaster RE40745p
protein.
Length = 297
Score = 41.1 bits (92), Expect = 0.003
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 157 LESDGTQVEDGDYWRTLPPNTVLLLLRQGERW 188
L+SDGT+++D +Y+RTL NT L+ + GE W
Sbjct: 54 LDSDGTEIDDEEYFRTLDENTELVAVFPGEHW 85
>AF041375-1|AAC34984.1| 299|Drosophila melanogaster DNA
fragmentation factor DREP-1 protein.
Length = 299
Score = 41.1 bits (92), Expect = 0.003
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 157 LESDGTQVEDGDYWRTLPPNTVLLLLRQGERW 188
L+SDGT+++D +Y+RTL NT L+ + GE W
Sbjct: 54 LDSDGTEIDDEEYFRTLDENTELVAVFPGEHW 85
>AE013599-1388|AAF58589.1| 297|Drosophila melanogaster CG8357-PA
protein.
Length = 297
Score = 41.1 bits (92), Expect = 0.003
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 157 LESDGTQVEDGDYWRTLPPNTVLLLLRQGERW 188
L+SDGT+++D +Y+RTL NT L+ + GE W
Sbjct: 54 LDSDGTEIDDEEYFRTLDENTELVAVFPGEHW 85
>AE013599-1391|AAF58588.2| 266|Drosophila melanogaster CG8364-PB,
isoform B protein.
Length = 266
Score = 39.9 bits (89), Expect = 0.008
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 142 KEKLSVAASEPVRLVLESDGTQVEDGDYWRTLPPNTVLLLLRQGERW 188
K L ++P + L+ DGT+V+D +Y+ TL PN L+ + GE+W
Sbjct: 145 KVSLKFERAQPA-IHLDCDGTEVDDEEYFSTLEPNAELIAVFPGEQW 190
>AE013599-1390|AAF58587.1| 266|Drosophila melanogaster CG8364-PA,
isoform A protein.
Length = 266
Score = 39.9 bits (89), Expect = 0.008
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 142 KEKLSVAASEPVRLVLESDGTQVEDGDYWRTLPPNTVLLLLRQGERW 188
K L ++P + L+ DGT+V+D +Y+ TL PN L+ + GE+W
Sbjct: 145 KVSLKFERAQPA-IHLDCDGTEVDDEEYFSTLEPNAELIAVFPGEQW 190
>BT015199-1|AAT94428.1| 335|Drosophila melanogaster RE69682p
protein.
Length = 335
Score = 33.9 bits (74), Expect = 0.52
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 43 GSRCIAGPGRCGARGAVGEVRGCGGRGTRPGHDSRPVRPPRSAGAHRALSVTHI 96
G + G G G G G V G GG G PGH P PP + A A + +
Sbjct: 198 GQGGVGGGGAAGGGG--GSVGGGGGGGGNPGHAFMPPAPPGAGSAAAAAAAAAV 249
>AE014298-2505|AAF48684.1| 335|Drosophila melanogaster CG13001-PA
protein.
Length = 335
Score = 33.9 bits (74), Expect = 0.52
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 43 GSRCIAGPGRCGARGAVGEVRGCGGRGTRPGHDSRPVRPPRSAGAHRALSVTHI 96
G + G G G G G V G GG G PGH P PP + A A + +
Sbjct: 198 GQGGVGGGGAAGGGG--GSVGGGGGGGGNPGHAFMPPAPPGAGSAAAAAAAAAV 249
>AY070621-1|AAL48092.1| 380|Drosophila melanogaster RE72719p
protein.
Length = 380
Score = 31.5 bits (68), Expect = 2.8
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 10/57 (17%)
Query: 27 INGNANFKILRHQEITGSRCIAGPGRCGARGAVGEVRGCGGRGTRPGHDSRPVRPPR 83
+NGNAN G+ G G + G+VG GG GT G ++ +PP+
Sbjct: 167 VNGNAN----------GTVTNGGAGAVSSSGSVGTTNASGGTGTASGKKTKKKKPPK 213
>AE014297-1376|AAF54696.2| 380|Drosophila melanogaster CG6930-PA,
isoform A protein.
Length = 380
Score = 31.5 bits (68), Expect = 2.8
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 10/57 (17%)
Query: 27 INGNANFKILRHQEITGSRCIAGPGRCGARGAVGEVRGCGGRGTRPGHDSRPVRPPR 83
+NGNAN G+ G G + G+VG GG GT G ++ +PP+
Sbjct: 167 VNGNAN----------GTVTNGGAGAVSSSGSVGTTNASGGTGTASGKKTKKKKPPK 213
>AE014297-1375|ABI31165.1| 447|Drosophila melanogaster CG6930-PC,
isoform C protein.
Length = 447
Score = 31.5 bits (68), Expect = 2.8
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 10/57 (17%)
Query: 27 INGNANFKILRHQEITGSRCIAGPGRCGARGAVGEVRGCGGRGTRPGHDSRPVRPPR 83
+NGNAN G+ G G + G+VG GG GT G ++ +PP+
Sbjct: 234 VNGNAN----------GTVTNGGAGAVSSSGSVGTTNASGGTGTASGKKTKKKKPPK 280
>AE014297-1374|AAN13528.2| 447|Drosophila melanogaster CG6930-PB,
isoform B protein.
Length = 447
Score = 31.5 bits (68), Expect = 2.8
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 10/57 (17%)
Query: 27 INGNANFKILRHQEITGSRCIAGPGRCGARGAVGEVRGCGGRGTRPGHDSRPVRPPR 83
+NGNAN G+ G G + G+VG GG GT G ++ +PP+
Sbjct: 234 VNGNAN----------GTVTNGGAGAVSSSGSVGTTNASGGTGTASGKKTKKKKPPK 280
>AY060724-1|AAL28272.1| 694|Drosophila melanogaster GH17145p
protein.
Length = 694
Score = 31.1 bits (67), Expect = 3.7
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 370 DAESARR---GDRDSSESETENTLVEDEAVTSEKFLLLIDQLSVDQKRHLTIKDIGIILE 426
DAE R +R+ S S TE+ L ED A+ + L+ + ++QK+ + ++ LE
Sbjct: 288 DAEIVERLLAAERELSPSATESELEEDAAIAEQSRRLISSRTDLEQKQRMIEENARRFLE 347
Query: 427 RLSSKILDVERLDRESESDD 446
++ +R + S S +
Sbjct: 348 AEEEMVMLQQRQLQASHSKE 367
>AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1
protein.
Length = 5327
Score = 31.1 bits (67), Expect = 3.7
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 334 EGRRIAVHKSV-ATSPIQDAQPRASPQGRPKGHVRF-----LDAESARRGDRDSSESETE 387
E RR ++ +S+ A+SP + P AS + G V LD + D+ + S E
Sbjct: 2247 ESRRESIAESIKASSPRDEKSPLASKEASRPGSVAESIKYDLDKPQIIKDDKSTEHSRRE 2306
Query: 388 NTLVEDEAVTSEKFLLLIDQLSVDQKRHLTIKD 420
+ L + AVTSEK + ++ D + + I+D
Sbjct: 2307 S-LEDKSAVTSEKSVSRPLSVASDHEAAVAIED 2338
>AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB
protein.
Length = 5412
Score = 31.1 bits (67), Expect = 3.7
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 334 EGRRIAVHKSV-ATSPIQDAQPRASPQGRPKGHVRF-----LDAESARRGDRDSSESETE 387
E RR ++ +S+ A+SP + P AS + G V LD + D+ + S E
Sbjct: 2440 ESRRESIAESIKASSPRDEKSPLASKEASRPGSVAESIKYDLDKPQIIKDDKSTEHSRRE 2499
Query: 388 NTLVEDEAVTSEKFLLLIDQLSVDQKRHLTIKD 420
+ L + AVTSEK + ++ D + + I+D
Sbjct: 2500 S-LEDKSAVTSEKSVSRPLSVASDHEAAVAIED 2531
>AE014296-2824|AAF49397.2| 694|Drosophila melanogaster CG11915-PA
protein.
Length = 694
Score = 31.1 bits (67), Expect = 3.7
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 370 DAESARR---GDRDSSESETENTLVEDEAVTSEKFLLLIDQLSVDQKRHLTIKDIGIILE 426
DAE R +R+ S S TE+ L ED A+ + L+ + ++QK+ + ++ LE
Sbjct: 288 DAEIVERLLAAERELSPSATESELEEDAAIAEQSRRLISSRTDLEQKQRMIEENARRFLE 347
Query: 427 RLSSKILDVERLDRESESDD 446
++ +R + S S +
Sbjct: 348 AEEEMVMLQQRQLQASHSKE 367
>BT023371-1|AAY55787.1| 342|Drosophila melanogaster IP10472p
protein.
Length = 342
Score = 30.3 bits (65), Expect = 6.4
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 20 FESFGKCINGNANFKILRHQEITGSRCIAG-PGRCGARGAVGEVRGCGGRGTRPGHDSRP 78
F ++G N NF L + + TG + G PG A G++ G GG G RP S P
Sbjct: 221 FSAYGSVFNLPVNF--LANGKPTGVYQVNGSPGE--AMGSLTPGLGGGGYGMRPPTPSNP 276
Query: 79 VRPPRS 84
RP S
Sbjct: 277 YRPMSS 282
>AE014297-3144|AAF55986.1| 342|Drosophila melanogaster CG13857-PA
protein.
Length = 342
Score = 30.3 bits (65), Expect = 6.4
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 20 FESFGKCINGNANFKILRHQEITGSRCIAG-PGRCGARGAVGEVRGCGGRGTRPGHDSRP 78
F ++G N NF L + + TG + G PG A G++ G GG G RP S P
Sbjct: 221 FSAYGSVFNLPVNF--LANGKPTGVYQVNGSPGE--AMGSLTPGLGGGGYGMRPPTPSNP 276
Query: 79 VRPPRS 84
RP S
Sbjct: 277 YRPMSS 282
>U19269-2|AAC46507.1| 1074|Drosophila melanogaster Dachshund variant
1 protein.
Length = 1074
Score = 29.9 bits (64), Expect = 8.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 71 RPGHDSRPVRPPRSAGAHRALSVTHITSTPQI 102
+P SRP RPP+ +L TH++ PQ+
Sbjct: 317 KPPESSRPGRPPKRGPVGLSLPPTHLSQHPQL 348
>AE014134-2725|AAN10943.1| 1074|Drosophila melanogaster CG4952-PD,
isoform D protein.
Length = 1074
Score = 29.9 bits (64), Expect = 8.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 71 RPGHDSRPVRPPRSAGAHRALSVTHITSTPQI 102
+P SRP RPP+ +L TH++ PQ+
Sbjct: 317 KPPESSRPGRPPKRGPVGLSLPPTHLSQHPQL 348
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.318 0.135 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,081,376
Number of Sequences: 52641
Number of extensions: 1036037
Number of successful extensions: 2967
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2927
Number of HSP's gapped (non-prelim): 40
length of query: 501
length of database: 24,830,863
effective HSP length: 88
effective length of query: 413
effective length of database: 20,198,455
effective search space: 8341961915
effective search space used: 8341961915
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)
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