Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002831-TA|BGIBMGA002831-PA|IPR001680|WD-40 repeat,
IPR011046|WD40-like
(270 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 97 2e-21
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 42 9e-05
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 41 2e-04
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 38 0.002
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 37 0.003
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 36 0.006
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 36 0.008
SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces pombe... 34 0.019
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 34 0.025
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 34 0.025
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 33 0.043
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 33 0.057
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 32 0.076
SPBC3H7.01 |spo14|stl1, SPBP16F5.01c|WD repeat protein Spo14|Sch... 32 0.076
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 32 0.076
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 32 0.076
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 32 0.10
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 32 0.10
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 31 0.13
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 31 0.18
SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit S... 31 0.18
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 31 0.18
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 31 0.23
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 31 0.23
SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces p... 31 0.23
SPAC23H3.05c |swd1||COMPASS complex subunit Swd1|Schizosaccharom... 29 0.53
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 29 0.71
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 28 1.2
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 28 1.2
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 28 1.6
SPBC8D2.13 |||SHQ1 family protein|Schizosaccharomyces pombe|chr ... 27 2.2
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 27 2.9
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 27 2.9
SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||M... 27 3.8
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 26 6.6
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 26 6.6
SPAC22H10.12c |gdi1|sec19|GDP dissociation inhibitor Gdi1 |Schiz... 25 8.7
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 97.5 bits (232), Expect = 2e-21
Identities = 81/272 (29%), Positives = 123/272 (45%), Gaps = 32/272 (11%)
Query: 1 MSEPPTEETLVQNTLWPELQKLYGHGGEVFALHAAPDGXXXXXXXXXXXXXXXXXVLWET 60
++ PP EE L + L+PE++KL+GHG EV+A + +G L+ET
Sbjct: 506 LNHPPFEEHLQRLLLFPEVEKLFGHGYEVYACAISNNGNIAATSCKSQTPEHAVIRLYET 565
Query: 61 AKWQQIQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSDKSNG 120
W Q Q ++ H+LT+T + FSPD + +LS RDR L+ + + A S
Sbjct: 566 QSWNQQQVLKGHSLTVTTIKFSPDDRYILSAGRDRLVCLHEQAENLLDYNNFA----SIK 621
Query: 121 VHSRIVWCCAWAPD--ARMFATGSRDGKCTESRPGLCPQVCLWAKSDTCTDTSLKEYALH 178
HSRI+W +WAP FAT SRD V W +D + + + A
Sbjct: 622 AHSRIIWDASWAPKEMGYFFATASRD-----------KFVKFWKIND---NKKICDVA-- 665
Query: 179 GSPLEAGASVTAL--ACTGRGERCVLAVGLETGAVDIYRA-----DDWRLLHRMDHSSAH 231
L+ +VTA+ A + +LAVG E G + I+R W DH +
Sbjct: 666 --ALQFSDAVTAVDFAPFFHNDELLLAVGTEAGKIFIWRCPRENLTKWYPTRLPDHMAPM 723
Query: 232 HLTVKRLTFNPKYEGSDETLLASAGADHVVRI 263
++ ++ + P +E L AG D VR+
Sbjct: 724 E-SINQILWKPTFETMGLYSLLIAGEDTSVRL 754
Score = 31.9 bits (69), Expect = 0.10
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 57 LW--ETAKWQQIQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRR 102
LW + +W Q+ I HT ++ +A+ P+ + LS D+ L+ R
Sbjct: 352 LWKQDAGQWLQLPSISGHTKSVKGVAWDPEGKFYLSAGTDQTTRLFAR 399
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 41.9 bits (94), Expect = 9e-05
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 9/89 (10%)
Query: 56 VLWETAKWQQIQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATS 115
++++ +++ ++ H T+ + +SPD + LLS S D+ L+ G +
Sbjct: 238 IIFDVVNLKRVFRLIGHIDTVAYIRWSPDDRYLLSCSCDKSVILWDAFTGEKLRDYK--- 294
Query: 116 DKSNGVHSRIVWCCAWAPDARMFATGSRD 144
H V CC W PD F TGS D
Sbjct: 295 ------HGFSVSCCCWLPDGLSFITGSPD 317
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 41.1 bits (92), Expect = 2e-04
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 66 IQKIESHTLTITQLAFSPDSQKLLSVSRDRR---WTLY-RRLPGSSRFEVAATSDKSNGV 121
++++E H ++ +AFSPDS LLS S D+ W L R G S + +
Sbjct: 477 VERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTG 536
Query: 122 HSRIVWCCAWAPDARMFATGSRD 144
H+ V A +PD+R +GS+D
Sbjct: 537 HTDFVLSVAVSPDSRWGLSGSKD 559
Score = 33.1 bits (72), Expect = 0.043
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 72 HTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSDKSNGVHSRIVWCCAW 131
HT + +A SPDS+ LS S+DR + G S H V +
Sbjct: 537 HTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQG--------HKNSVISVCF 588
Query: 132 APDARMFATGSRD 144
+PD R FA+GS D
Sbjct: 589 SPDGRQFASGSGD 601
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 58 WETAKWQQIQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGS 106
W+ Q + H ++ + FSPD ++ S S D R ++ P S
Sbjct: 565 WDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSIDPAS 613
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 37.5 bits (83), Expect = 0.002
Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 13/126 (10%)
Query: 19 LQKLYGHGGEVFALHAAPDGXXXXXXXXXXXXXXXXXVLWETAKWQQIQKIESHTLTITQ 78
+ K++GH V +PDG LW+ + + + H + Q
Sbjct: 382 ITKMHGHQKVVNHASFSPDGRCIATASFDSSVR-----LWDGKTGKFLATLRGHVAAVYQ 436
Query: 79 LAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSDKSNGVHSRIVWCCAWAPDARMF 138
A+S DS+ L+S S+D ++ +F++ D+ V+ W+PD +
Sbjct: 437 CAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQ--------VFAVDWSPDGQRV 488
Query: 139 ATGSRD 144
A+G D
Sbjct: 489 ASGGAD 494
Score = 34.3 bits (75), Expect = 0.019
Identities = 14/23 (60%), Positives = 16/23 (69%)
Query: 122 HSRIVWCCAWAPDARMFATGSRD 144
H+ V C AWAPDA + ATGS D
Sbjct: 176 HTNWVSCVAWAPDASIIATGSMD 198
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 37.1 bits (82), Expect = 0.003
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 57 LWETAKWQQIQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSD 116
LW+ ++ + ++E H + ++AF P L+S S D W L+ G E+
Sbjct: 249 LWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTG---VELLMQEG 305
Query: 117 KSNGVHSRIVWCCAWAPDARMFATGSRD--GKCTESRPG 153
S G+ S A PD + ++G D G+ + R G
Sbjct: 306 HSEGIFS-----IACQPDGSLVSSGGNDAIGRIWDLRSG 339
Score = 31.1 bits (67), Expect = 0.18
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 18 ELQKLYGHGGEVFALHAAPDGXXXXXXXXXXXXXXXXXVLWETAKWQQIQKIESHTLTIT 77
EL GH +F++ PDG +W+ + I ++ H I
Sbjct: 299 ELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGR-----IWDLRSGKSIMVLDEHIRQIV 353
Query: 78 QLAFSPDSQKLLSVSRD 94
+A+SP+ +L + S D
Sbjct: 354 AMAWSPNGYQLATSSAD 370
Score = 26.6 bits (56), Expect = 3.8
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 8/88 (9%)
Query: 57 LWETAKWQQIQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSD 116
LW+ ++ E H+ I +A PD + S D ++ G S + D
Sbjct: 291 LWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVL----D 346
Query: 117 KSNGVHSRIVWCCAWAPDARMFATGSRD 144
+ H R + AW+P+ AT S D
Sbjct: 347 E----HIRQIVAMAWSPNGYQLATSSAD 370
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 35.9 bits (79), Expect = 0.006
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 64 QQIQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSDKSNGVHS 123
Q + K ++H IT+ SPD + L + S D ++ S +++ ++ H
Sbjct: 206 QPVVKFQAHQRYITRCVLSPDVKHLATCSADATVNIW------STEDMSFMLERRLQGHQ 259
Query: 124 RIVWCCAWAPDARMFATGSRD 144
R VW CA++ D+ T S D
Sbjct: 260 RWVWDCAFSADSTYLVTASSD 280
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 35.5 bits (78), Expect = 0.008
Identities = 19/78 (24%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 57 LWETAKWQQIQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSD 116
LW+ K + + HT + ++ SPD+++++S SRD+ ++ + G+ ++ +
Sbjct: 89 LWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIW-NIIGNCKYTI----- 142
Query: 117 KSNGVHSRIVWCCAWAPD 134
++G HS V C ++P+
Sbjct: 143 -TDGGHSDWVSCVRFSPN 159
Score = 29.9 bits (64), Expect = 0.40
Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 9/124 (7%)
Query: 22 LYGHGGEVFALHAAPDGXXXXXXXXXXXXXXXXXVLWETAKWQQIQK-IESHTLTITQLA 80
L GH G V +L AP+ ++ + + Q+ + H+ ++ A
Sbjct: 11 LEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCA 70
Query: 81 FSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSDKSNGVHSRIVWCCAWAPDARMFAT 140
S DS LS S D+ L+ G + H+ V + +PD R +
Sbjct: 71 LSFDSHYALSASWDKTIRLWDLEKGECTHQFVG--------HTSDVLSVSISPDNRQVVS 122
Query: 141 GSRD 144
GSRD
Sbjct: 123 GSRD 126
Score = 25.4 bits (53), Expect = 8.7
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Query: 23 YGHGGEVFALHAAPDGXXXXXXXXXXXXXXXXXVLWETAKWQQIQKIESHTLTITQLAFS 82
YGH G V A+ +PDG +LW+ + + +E+ I L FS
Sbjct: 189 YGHTGYVSAVTISPDG-----SLCASGGRDGTLMLWDLNESTHLYSLEAKA-NINALVFS 242
Query: 83 PD 84
P+
Sbjct: 243 PN 244
>SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 373
Score = 34.3 bits (75), Expect = 0.019
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 56 VLWETAKWQQIQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSR 108
+LW+ +QI KIE+H ++ LAF+ D L + S + R +P R
Sbjct: 171 ILWDVINCKQITKIEAHKDSLACLAFNSDGTMLATASDNGRIIRVFAIPSGQR 223
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 33.9 bits (74), Expect = 0.025
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 7/94 (7%)
Query: 57 LWETAKWQQIQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSD 116
LW+ ++I + HT + + S D + +L+ S D L+ F A SD
Sbjct: 200 LWDCVSKKRITDLVGHTDNVRDILISDDGRTILTASSDATIKLWSLRAQKCLFSFIAHSD 259
Query: 117 KSNGVHSRIVWCCAWAPDARMFATGSRDGKCTES 150
++S PD ++F G R G T +
Sbjct: 260 SVWALYSE-------HPDLKVFYAGDRSGLITRT 286
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/38 (28%), Positives = 23/38 (60%)
Query: 64 QQIQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYR 101
Q + KI++H+ + +A + DS+ ++S S D L++
Sbjct: 70 QPLAKIQAHSAWVNDIALTHDSEGVISCSSDSTVKLWK 107
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 33.9 bits (74), Expect = 0.025
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 66 IQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSDKSNGVHSRI 125
++ +++H + + +AFSP+ K ++ S D ++ F ++ K G H
Sbjct: 157 VKIVQAHEMEVRDVAFSPNDSKFVTASDDGSLKVW-------NFHMSTEELKLTG-HGWD 208
Query: 126 VWCCAWAPDARMFATGSRDG--KCTESRPGLC 155
V W P + A+GS+D K + R G C
Sbjct: 209 VKTVDWHPSKGLLASGSKDNLVKFWDPRTGTC 240
Score = 30.7 bits (66), Expect = 0.23
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 76 ITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSDKSNGVHSRIVWCCAWAPDA 135
I + ++PD ++LL+ S +TL+ L + FE+ N H V C W+ D
Sbjct: 84 INVVRWTPDGRRLLTGSSTGEFTLWNGL--TFNFELI------NQSHDYAVRCAEWSTDG 135
Query: 136 RMFATGSRDGKCTESRPGL 154
R +G G P L
Sbjct: 136 RWLISGDGGGMVKYFEPNL 154
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 33.1 bits (72), Expect = 0.043
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 69 IESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSDKSNGVHSRIVWC 128
I++H + + S D + + S S+D+ L+ SS EV G H R VW
Sbjct: 461 IKAHDRDVNAIQVSKDGRIIASASQDKTIKLW----DSSTGEVVGVL---RG-HRRGVWA 512
Query: 129 CAWAPDARMFATGSRD 144
C++ P +R A+GS D
Sbjct: 513 CSFNPFSRQLASGSGD 528
Score = 31.1 bits (67), Expect = 0.18
Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 6/82 (7%)
Query: 24 GHGGEVFALHAAPDGXXXXXXXXXXXXXXXXXVLWETAKWQQIQKIESHTLTITQLAFSP 83
GHGG + AL G LW+ + + E H+ I L F P
Sbjct: 143 GHGGVISALCF---GKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEP 199
Query: 84 DSQKLLSVSRDRR---WTLYRR 102
LLS SRD+ W + +R
Sbjct: 200 TGSFLLSGSRDKTVQVWNIKKR 221
Score = 30.3 bits (65), Expect = 0.31
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 76 ITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSDKSNGVHSRIVWCCAWAPDA 135
+T LA + DS+KL++ R R T+Y +P R KS H V P
Sbjct: 64 VTALAITSDSKKLIAAFRSRLLTIY-EIPSGRRI-------KSMKAHETPVITMTIDPTN 115
Query: 136 RMFATGSRDG 145
+ ATG +G
Sbjct: 116 TLLATGGAEG 125
Score = 29.1 bits (62), Expect = 0.71
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 8/88 (9%)
Query: 57 LWETAKWQQIQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSD 116
+W Q +Q +E HT I +L + +++S + D ++ G E AT D
Sbjct: 533 IWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSG----ECVATLD 588
Query: 117 KSNGVHSRIVWCCAWAPDARMFATGSRD 144
H VW A D + +G D
Sbjct: 589 N----HEDRVWALASRFDGSLLVSGGAD 612
Score = 25.8 bits (54), Expect = 6.6
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 57 LWETAKWQQIQKIESHTLTITQLAFSPDSQKLLSVSRDR 95
LW+++ + + + H + +F+P S++L S S DR
Sbjct: 491 LWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDR 529
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 32.7 bits (71), Expect = 0.057
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 57 LWETAKWQQIQKIESHTLTITQLAFSPDSQKLLSVSRD---RRWTLYRRLP 104
LW+ + I + +HT + L+ SPD Q +++ + D R W L+ + P
Sbjct: 363 LWKYPSLKNIANLTAHTNRVLYLSMSPDGQSIVTGAGDETLRFWKLFNKKP 413
Score = 27.1 bits (57), Expect = 2.9
Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 57 LWETAKWQQIQKIESHTLTITQLAFSPDSQKLLSV---SRDRRWTLYRRLPGSSRFEVAA 113
+W+ + + K E HT + + +SP + +L+ + DR T++ L G + ++
Sbjct: 275 VWDYRSSRPLHKFEEHTAAVKAIGWSPHQRGILASGGGTIDRCLTIHNTLTGRLQNKLDT 334
Query: 114 TSDKSNGVHSR 124
S N S+
Sbjct: 335 GSQVCNMAWSK 345
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 32.3 bits (70), Expect = 0.076
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 187 SVTALACTGRGERCVLAVGLETGAVDIYRADDWRLLHRMDHS 228
S+T LA R +L+ GL+ G V IY DW+++H M +S
Sbjct: 252 SITCLAMNSENTR-LLSGGLD-GHVKIYNISDWKVVHGMKYS 291
>SPBC3H7.01 |spo14|stl1, SPBP16F5.01c|WD repeat protein
Spo14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 32.3 bits (70), Expect = 0.076
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 65 QIQKIESHTLTITQLAFSPDSQKLLSVSRD 94
++ ++ H+L +T + SPDS+ L+SVS D
Sbjct: 290 KLSQVYKHSLPVTDMQLSPDSEALVSVSAD 319
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 32.3 bits (70), Expect = 0.076
Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 7/124 (5%)
Query: 16 WPELQKLYGHGGEVFALHAAPDGXXXXXXXXXXXXXXXXXVLWETAKWQQIQKIESHTLT 75
W ++L GH ++ L + D ++W ++++++IE+H
Sbjct: 124 WRSYRRLLGHDNDIQDLCWSYDSQLVVSVGLDSSI-----IVWNGTTFERLKRIEAHQSH 178
Query: 76 ITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSDKSNGVHSRIVWCCAWAPDA 135
+ + F P + + S DR ++R E T +N S +W+PD
Sbjct: 179 VKGITFDPAGKYFATESDDRTIKVWR--VSDFSIEKTITGPFNNSPLSTYFRRPSWSPDG 236
Query: 136 RMFA 139
+ A
Sbjct: 237 KHIA 240
Score = 30.3 bits (65), Expect = 0.31
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 64 QQIQKIESHTLTITQLAFSPDSQKLLSVSRDR---RWTLYRRLPG 105
+Q+ + +HT T+T + FSP+ Q L S S DR W +PG
Sbjct: 65 KQLCCMSTHTGTVTSVRFSPNGQYLASGSDDRVVIIWHKEEAIPG 109
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 60 TAKWQQIQKIESHTLTITQLAFSPDSQKLLSVSRD 94
T W+ +++ H I L +S DSQ ++SV D
Sbjct: 121 TENWRSYRRLLGHDNDIQDLCWSYDSQLVVSVGLD 155
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 32.3 bits (70), Expect = 0.076
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 68 KIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSDKSNGVHSRIVW 127
++ SH+ + FSPD++ LLS S D L+ S + A + K H+ VW
Sbjct: 374 RLLSHSGPVYGTTFSPDNKYLLSCSEDASARLW-----SVDTKTALVAYKG---HTGPVW 425
Query: 128 CCAWAPDARMFATGSRD 144
A+ P FAT S D
Sbjct: 426 DVAFGPFGHYFATASHD 442
Score = 30.7 bits (66), Expect = 0.23
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 8/81 (9%)
Query: 24 GHGGEVFALHAAPDGXXXXXXXXXXXXXXXXXVLWETAKWQQIQKIESHTLTITQLAFSP 83
GH V A+ APDG LW+ ++I+ + H I L+FS
Sbjct: 503 GHTQPVTAVAIAPDGHTMASADSEGLIH-----LWDIGTGRRIKTMRGHRGNIYSLSFSR 557
Query: 84 DSQKLLSVSRD---RRWTLYR 101
+S L+S D R W +++
Sbjct: 558 ESTVLVSGGSDCTVRAWDVFK 578
Score = 27.5 bits (58), Expect = 2.2
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 57 LWETAKWQQIQKIESHTLTITQLAFSPDSQKLLSVSRD 94
LW+ + ++ HT +T +A +PD + S +
Sbjct: 489 LWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSE 526
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 31.9 bits (69), Expect = 0.10
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 63 WQQIQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSDKSN 119
W +++ HT T+ LAFSP+ L S D L+ ++ S E AT D +N
Sbjct: 457 WALTCQLQGHTNTVWALAFSPNGNTLASADNDGNVFLWIKI---SSNEDVATIDSTN 510
Score = 27.1 bits (57), Expect = 2.9
Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 9/92 (9%)
Query: 57 LWETAKWQQ---IQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAA 113
+WE + + + ++ HT + + + P L+S S D +R + A
Sbjct: 404 IWEATEDDEFDCLAVLQEHTQDVKVVTWHPTEDLLVSGSYDNSICFWR----DDGDDWAL 459
Query: 114 TSDKSNGVHSRIVWCCAWAPDARMFATGSRDG 145
T H+ VW A++P+ A+ DG
Sbjct: 460 TCQLQG--HTNTVWALAFSPNGNTLASADNDG 489
Score = 25.8 bits (54), Expect = 6.6
Identities = 18/82 (21%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Query: 63 WQQIQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSDKSNGVH 122
W+ +E H + +A+S + L + SRD+ ++ F+ A + H
Sbjct: 368 WECTAALEGHENEVKCIAWSCNGNYLATCSRDKSVWIWEATE-DDEFDCLAVLQE----H 422
Query: 123 SRIVWCCAWAPDARMFATGSRD 144
++ V W P + +GS D
Sbjct: 423 TQDVKVVTWHPTEDLLVSGSYD 444
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 31.9 bits (69), Expect = 0.10
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Query: 57 LWETAKWQQIQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSD 116
+W T+ ++++ H ++ +AFSPD + L+S S D L+ S+ VA +
Sbjct: 443 IW-TSSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSN---VAPSMY 498
Query: 117 KSNGV-------HSRIVWCCAWAPDARMFATGSRD 144
K G+ H + +PD + +GS+D
Sbjct: 499 KEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKD 533
Score = 30.7 bits (66), Expect = 0.23
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 17/124 (13%)
Query: 22 LYGHGGEVFALHAAPDGXXXXXXXXXXXXXXXXXVLWETAKWQQIQKIESHTLT-ITQLA 80
L GH E+++L + DG LW+ +Q K+ HT +T +
Sbjct: 372 LTGHEQEIYSLDFSKDGKTLVSGSGDRTV-----CLWDVEAGEQ--KLILHTDDGVTTVM 424
Query: 81 FSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSDKSNGVHSRIVWCCAWAPDARMFAT 140
FSPD Q + + S D+ R+ SS ++ +G H V+ A++PD + +
Sbjct: 425 FSPDGQFIAAGSLDK----VIRIWTSS----GTLVEQLHG-HEESVYSVAFSPDGKYLVS 475
Query: 141 GSRD 144
GS D
Sbjct: 476 GSLD 479
Score = 27.5 bits (58), Expect = 2.2
Identities = 33/138 (23%), Positives = 53/138 (38%), Gaps = 25/138 (18%)
Query: 19 LQKLYGHGGEVFALHAAPDGXXXXXXXXXXXXXXXXXVLWETAKWQQI------------ 66
+++L+GH V+++ +PDG LWE +
Sbjct: 451 VEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIK-----LWELQCVSNVAPSMYKEGGICK 505
Query: 67 QKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSDKSNGVHSRIV 126
Q H I + SPD + ++S S+DR T+ P S ++ H+ V
Sbjct: 506 QTFTGHKDFILSVTVSPDGKWIISGSKDR--TIQFWSPDSPHSQLTLQG------HNNSV 557
Query: 127 WCCAWAPDARMFATGSRD 144
A +P+ FATGS D
Sbjct: 558 ISVAVSPNGHCFATGSGD 575
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 31.5 bits (68), Expect = 0.13
Identities = 16/81 (19%), Positives = 35/81 (43%), Gaps = 8/81 (9%)
Query: 67 QKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSDKSNGVHSRIV 126
+ + H+ + + +SP+ ++ S D + ++ G +E+ A H +
Sbjct: 183 RSLRVHSKFVYDVRYSPNDERFASAGADGKVYVFDGKTGDQVYEIDA--------HKGSI 234
Query: 127 WCCAWAPDARMFATGSRDGKC 147
+ +W+PD+ F T S C
Sbjct: 235 FSISWSPDSSQFVTSSAGYSC 255
Score = 26.6 bits (56), Expect = 3.8
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 116 DKSNGVHSRIVWCCAWAPDARMFATGSRDGK 146
++S VHS+ V+ ++P+ FA+ DGK
Sbjct: 182 NRSLRVHSKFVYDVRYSPNDERFASAGADGK 212
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 31.1 bits (67), Expect = 0.18
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 57 LWETAKWQQIQKIESHTLTITQLAFSPDSQKLLSVSRDR 95
LW A +QQ+ +E H+ +T L F D KL+S S D+
Sbjct: 297 LWNLATFQQVALLEGHSSGVTCLQF--DQCKLISGSMDK 333
>SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit
Sop2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 377
Score = 31.1 bits (67), Expect = 0.18
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 63 WQQIQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSDKSNGVH 122
W+ + H +T + ++P S ++++ S+DR +Y + P + ++ + N
Sbjct: 45 WKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGT-WKQTLVLLRLN--- 100
Query: 123 SRIVWCCAWAPDARMFATGS 142
R W+P+ FA GS
Sbjct: 101 -RAATFVRWSPNEDKFAVGS 119
Score = 26.6 bits (56), Expect = 3.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 122 HSRIVWCCAWAPDARMFATGSRD 144
H +IV C WAP + T S+D
Sbjct: 54 HDKIVTCVDWAPKSNRIVTCSQD 76
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 31.1 bits (67), Expect = 0.18
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 57 LWETAKW-QQIQKIESHTLTITQLAFSPDSQKLL-SVSRDRR---WTLYR 101
LW+ Q++ +E H +T+++FSP + +L S S DRR W L R
Sbjct: 308 LWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWDLSR 357
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 30.7 bits (66), Expect = 0.23
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Query: 69 IESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSDKSNGVHSRIVWC 128
+E H + AF P +LS DR L+ R+ S +EV D G H V C
Sbjct: 208 LEGHDRGVNWCAFHPTLPLILSAGDDRLVKLW-RMTASKAWEV----DTCRG-HFNNVSC 261
Query: 129 CAWAPDARMFATGSRD 144
C + P + + S D
Sbjct: 262 CLFHPHQELILSASED 277
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 30.7 bits (66), Expect = 0.23
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Query: 57 LWETAKWQQIQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLP-GSSRFEVAATS 115
+W+ ++ H IT LA S D LLS S D ++ P S++ ++
Sbjct: 203 IWDLRNNHCSHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFE 262
Query: 116 DKSNGVHSRIVWCCAWAPDARMFATGSRD 144
+G ++ AW+ ++R GS D
Sbjct: 263 GAIHGQEHNLLG-VAWSRNSRFVGAGSSD 290
>SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 309
Score = 30.7 bits (66), Expect = 0.23
Identities = 28/120 (23%), Positives = 46/120 (38%), Gaps = 13/120 (10%)
Query: 11 VQNTLWPELQKLY---GHGGEVFALHAAPDGXXXXXXXXXXXXXXXXXVLWETAKWQQIQ 67
VQ WP L+++Y H F + +PD LW+ + +
Sbjct: 176 VQIMEWPSLKRVYDIKAHNSNCFCIEFSPDNRHLAIGGADAITS-----LWDPQELICER 230
Query: 68 KIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSDKSNGVHSRIVW 127
I I L+FS DS+ L S S DR + G +++ +NG +++ W
Sbjct: 231 SITRMDYPIRTLSFSYDSRYLASGSEDRYVDIADTKTGDQIWKI-----PTNGPLNKVAW 285
>SPAC23H3.05c |swd1||COMPASS complex subunit
Swd1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 29.5 bits (63), Expect = 0.53
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 56 VLWETAKWQQIQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATS 115
V+W+ + + + + HT I + +S + LL+ SRD + L+ GS ++V ++
Sbjct: 49 VIWDLSTFSVSRVLTGHTRAIQSVCWSSCDRFLLTASRDWKCILWDLRDGSIVYQVVLSA 108
Score = 25.8 bits (54), Expect = 6.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 122 HSRIVWCCAWAPDARMFATGSRDGKC 147
H+R + W+ R T SRD KC
Sbjct: 65 HTRAIQSVCWSSCDRFLLTASRDWKC 90
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 29.1 bits (62), Expect = 0.71
Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 57 LWETAKWQQIQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSD 116
+W+ +QI ++ H +I + +S D + + D + L++ G T D
Sbjct: 88 IWDITTGEQICQLTGHKDSIVAIDWSFDGTYIATGGMDSQVRLWKSSTGFEFITAFETVD 147
Query: 117 KSNGVHSRIVWCCAWAPDARMFATGSRDG 145
+ IVW +W P A G DG
Sbjct: 148 E-------IVW-LSWHPKGLFLAAGCNDG 168
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 106 SSRFEVAATSDKSNGVHSRIVWCCAWAPDARMFATGSRD 144
S VA TS+ S+ + +W ++ D R A G +D
Sbjct: 221 SDTLAVAITSNSSSNSSNNAIWAMKFSRDGRYLAVGGQD 259
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 28.3 bits (60), Expect = 1.2
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 79 LAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSDKSNGVHSRIVWCCAWAPDARMF 138
L FS D + L SVS DR L+ SS F +A + HS VW C + P+ +
Sbjct: 200 LKFSSDGRYLCSVSEDRTLRLWS--IESSPFLIA-----TGFGHSARVWRCVFLPN-KEI 251
Query: 139 ATGSRD 144
AT S D
Sbjct: 252 ATVSED 257
Score = 25.4 bits (53), Expect = 8.7
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 72 HTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSDKSNGVHSRIVWCCAW 131
H I + F+P LLS S D + TL + + + ++G+ S W
Sbjct: 651 HGREIRAMDFNPSGDLLLSGSEDTKVTLLEFQSNGNIIPLNSVKFHNSGIQS-----LTW 705
Query: 132 APDARMFATG 141
D +F+TG
Sbjct: 706 FSDDILFSTG 715
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 27.9 bits (59), Expect = 1.6
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 198 ERCVLAVGLETGAVDIYRADDWRLLHRMDHSSAHHLTVKRLTFNPKYEGSDETLLASAGA 257
++C+++ ++G +++Y L+ R+ AH + L G D T A+A A
Sbjct: 447 DKCIVSA-YKSGELEVYDIASSSLIERIQ---AHDGAIWDLAV-----GHDGTYFATASA 497
Query: 258 DHVVRIHRLKITY 270
DH V++ LK ++
Sbjct: 498 DHTVKLWSLKSSF 510
Score = 26.2 bits (55), Expect = 5.0
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Query: 67 QKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSDKSNGVHSRIV 126
+ I +H +I ++ F PD+ + S+DR R G S F++ K G HS V
Sbjct: 612 KSIFAHQDSIMEVTFQPDTYNFFTCSKDRE---VRYWDGKS-FDLIL---KLRGHHSE-V 663
Query: 127 WCCAWAPDARMFATGSRD 144
W A P +GS D
Sbjct: 664 WALAVGP--TFVVSGSHD 679
>SPBC8D2.13 |||SHQ1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 451
Score = 27.5 bits (58), Expect = 2.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 218 DWRLLHRMDHSSAHHLTVKRLTFNPKYEG 246
DW LL R+D + + + FN +Y G
Sbjct: 146 DWGLLQRLDDEKMQYTSTSQYGFNNQYSG 174
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 27.1 bits (57), Expect = 2.9
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 8/80 (10%)
Query: 65 QIQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSDKSNGVHSR 124
Q + HT + ++ SP + +LS S D L+ + + +T K G H+
Sbjct: 395 QKSSLIGHTRPVFGVSISPQKEFILSCSEDGFTRLWSK-------DTKSTIVKYAG-HNA 446
Query: 125 IVWCCAWAPDARMFATGSRD 144
+W ++P FAT S D
Sbjct: 447 PIWDVQFSPFGYYFATASHD 466
Score = 27.1 bits (57), Expect = 2.9
Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 8/88 (9%)
Query: 57 LWETAKWQQIQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSD 116
LW I K H I + FSP + S D+ L+ E AA
Sbjct: 429 LWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASHDQTARLWD-------VEHAAPLR 481
Query: 117 KSNGVHSRIVWCCAWAPDARMFATGSRD 144
G H V C ++ P+A ATGS D
Sbjct: 482 VFVG-HQNDVDCVSFHPNAAYLATGSSD 508
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/59 (18%), Positives = 26/59 (44%)
Query: 57 LWETAKWQQIQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATS 115
LW ++ ++ HT + LA SP+ + +++ + D ++ S+ + S
Sbjct: 488 LWNYPSVSRVGTLKGHTDRVLYLAMSPNGENIVTGAADETLRFWKLFDSKSKHSASTMS 546
>SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 556
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 66 IQKIESHTLTITQLAFSPDSQKLLSVSRDRRWTL 99
+ +++ T +I ++FS DSQ L SR ++ TL
Sbjct: 433 VTTLDNITFSINSMSFSQDSQVLAIASRGKKDTL 466
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 69 IESHTLTITQLAFSPDSQKLLSVSRDRRWTLYRRLPG 105
+ HT + +AFSP S L + + T+Y L G
Sbjct: 183 LSGHTSPVRSVAFSPGSTLLAAAGDSKMITIYDVLSG 219
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 25.8 bits (54), Expect = 6.6
Identities = 26/104 (25%), Positives = 40/104 (38%), Gaps = 6/104 (5%)
Query: 76 ITQLAFSPDSQKLLSVSRDRRWTLYRRLPGSSRFEVAATSDKSNGVHSRIVWCCAWAPDA 135
+ LAF PD +++ S D + T + G + D S G +
Sbjct: 512 VLSLAFHPDGKEVCVASLDGQLTFWNVQEGKQTSLIDGRKDLSGGRRFDDARTAENSSLN 571
Query: 136 RMFAT--GSRDGKCTESRPGLCPQVCLWAKSDTCTDTSLKEYAL 177
+ F + S DG C S G VCL+ D T +K++ L
Sbjct: 572 KTFTSICYSADGSCVLS-AGTSKYVCLY---DIITGVLIKKFQL 611
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 56 VLWETAKWQQIQKIESHTLTITQLAFSPDSQKLLSVSRD 94
++WE + K +SH ++ L +S D Q++++ + D
Sbjct: 322 LVWEWQSESYVLKQQSHYDALSTLQYSSDGQRIITGADD 360
>SPAC22H10.12c |gdi1|sec19|GDP dissociation inhibitor Gdi1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 70 ESHTLTITQL--AFSPDSQKLLSVSRDRRW 97
+S +L +TQL F P Q+ S+ RDR W
Sbjct: 42 DSASLNLTQLYALFRPGEQRPESLGRDRDW 71
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.132 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,168,049
Number of Sequences: 5004
Number of extensions: 41951
Number of successful extensions: 201
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 97
Number of HSP's gapped (non-prelim): 97
length of query: 270
length of database: 2,362,478
effective HSP length: 72
effective length of query: 198
effective length of database: 2,002,190
effective search space: 396433620
effective search space used: 396433620
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)
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