GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002831-TA|BGIBMGA002831-PA|IPR001680|WD-40 repeat,
IPR011046|WD40-like
         (270 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    26   0.99 
AY045760-3|AAK84944.1|  168|Anopheles gambiae D7-related 2 prote...    24   5.3  
AJ133853-1|CAB39728.1|  168|Anopheles gambiae D7-related 2 prote...    24   5.3  
AJ000036-1|CAA03872.1|  150|Anopheles gambiae D7r2 protein protein.    24   5.3  
AF203334-1|AAF19829.1|  110|Anopheles gambiae immune-responsive ...    24   5.3  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   7.0  
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            23   9.3  

>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 26.2 bits (55), Expect = 0.99
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 201 VLAVGLETGAVDIYRADDWRLLHRMDHSSA 230
           +LAV L   A ++ R D++RL     HS A
Sbjct: 19  ILAVALSVEAAEVARYDNYRLYRVTPHSEA 48


>AY045760-3|AAK84944.1|  168|Anopheles gambiae D7-related 2 protein
           protein.
          Length = 168

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 199 RCVL-AVGLETGAVDIYRADDWRLLHRMDHSSAHHLTVKRLTFNPKYEGSDE 249
           +CVL  VG   G  ++  +    LL R+D    H   +K+        GSD+
Sbjct: 61  QCVLEVVGFVDGNGEVKESVLLELLQRVDSGVNHAANMKKCVTEASTSGSDK 112


>AJ133853-1|CAB39728.1|  168|Anopheles gambiae D7-related 2 protein
           protein.
          Length = 168

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 199 RCVL-AVGLETGAVDIYRADDWRLLHRMDHSSAHHLTVKRLTFNPKYEGSDE 249
           +CVL  VG   G  ++  +    LL R+D    H   +K+        GSD+
Sbjct: 61  QCVLEVVGFVDGNGEVKESVLLELLQRVDSGVNHAANMKKCVTEASTSGSDK 112


>AJ000036-1|CAA03872.1|  150|Anopheles gambiae D7r2 protein protein.
          Length = 150

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 199 RCVL-AVGLETGAVDIYRADDWRLLHRMDHSSAHHLTVKRLTFNPKYEGSDE 249
           +CVL  VG   G  ++  +    LL R+D    H   +K+        GSD+
Sbjct: 61  QCVLEVVGFVDGNGEVKESVLLELLQRVDSGVNHAANMKKCVTEASTSGSDK 112


>AF203334-1|AAF19829.1|  110|Anopheles gambiae immune-responsive
           serine protease-relatedprotein ISPR5 protein.
          Length = 110

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/49 (20%), Positives = 20/49 (40%)

Query: 110 EVAATSDKSNGVHSRIVWCCAWAPDARMFATGSRDGKCTESRPGLCPQV 158
           E  A ++   G++  +     W P   +    S   +C + RP +  +V
Sbjct: 53  EPTACAESGTGLYGTVYMTSDWRPVNFVVGIYSNGAQCAQHRPAIYTRV 101


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 131 WAPDARMFATGSRDGKCTESRPGLCPQV-CLWAKSDTCT 168
           +A DA++FA  +  G CT  +   C ++ C W K +  T
Sbjct: 773 FADDAKIFAPINNTGDCTFLQD--CIEIFCSWCKRNGLT 809


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 57  LWETAKWQQIQKIESHTLTITQLAFSP-DSQKLLSVSRDRRWTLYRRLPGSSRFEVAATS 115
           +W+TA  ++   +        Q A    D Q   S +R + W    +   S    +A   
Sbjct: 77  IWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAG 136

Query: 116 DKSNGVHSRIV 126
           +K++  +SR+V
Sbjct: 137 NKADLANSRVV 147


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.132    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 279,007
Number of Sequences: 2123
Number of extensions: 10163
Number of successful extensions: 66
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 64
Number of HSP's gapped (non-prelim): 7
length of query: 270
length of database: 516,269
effective HSP length: 63
effective length of query: 207
effective length of database: 382,520
effective search space: 79181640
effective search space used: 79181640
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)