GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002830-TA|BGIBMGA002830-PA|undefined
         (94 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   2.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   2.2  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   2.2  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    19   6.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    19   8.7  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 2.2
 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 22  RVFTAPHNFISNFKNLVGEVLVANNEKGPEGASVPS-LGLS 61
           +V   PH    N   LV     AN   GP   S+ S +GL+
Sbjct: 75  KVEPVPHTSSFNMGYLVSPYSYANGAAGPIPVSMASKMGLA 115


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 2.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 29  NFISNFKNLVGEVLVANNE 47
           NF+S  + +  E+LV +NE
Sbjct: 215 NFLSQVEIIHNEILVTHNE 233


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory
          receptor candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 2.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 29 NFISNFKNLVGEVLVANNE 47
          NF+S  + +  E+LV +NE
Sbjct: 40 NFLSQVEIIHNEILVTHNE 58


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
          protein.
          Length = 377

 Score = 19.4 bits (38), Expect = 6.6
 Identities = 10/17 (58%), Positives = 13/17 (76%), Gaps = 2/17 (11%)

Query: 7  LTATT--FASAAEEKVI 21
          L+ATT  F SAA +K+I
Sbjct: 8  LSATTLQFTSAASDKII 24


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 19.0 bits (37), Expect = 8.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 32  SNFKNLVGEVLVANNEKGPE 51
           SN +N +   L++NN   PE
Sbjct: 664 SNQRNFLKNALMSNNILPPE 683


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.131    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,439
Number of Sequences: 317
Number of extensions: 559
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 94
length of database: 114,650
effective HSP length: 48
effective length of query: 46
effective length of database: 99,434
effective search space:  4573964
effective search space used:  4573964
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.8 bits)
S2: 37 (19.0 bits)