GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002829-TA|BGIBMGA002829-PA|IPR001787|Ribosomal protein
L21
         (176 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.5  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   7.5  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.5  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 154 QQTILRINSVEIGNKINEGRND 175
           Q T+L I    +G K+N   ND
Sbjct: 174 QFTLLSIGETAMGIKLNASDND 195


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 11/31 (35%), Positives = 20/31 (64%)

Query: 3   LLRSGLQRVANIFGGTQGGILSRFVTSLVPS 33
           +L + ++ V +IFG T   IL++ +TS + S
Sbjct: 212 ILTTMMEMVNDIFGWTLILILAKCITSSLSS 242


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 154 QQTILRINSVEIGNKINEGRND 175
           Q T+L I    +G K+N   ND
Sbjct: 174 QFTLLSIGETAMGIKLNASDND 195


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.136    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,349
Number of Sequences: 317
Number of extensions: 1242
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 176
length of database: 114,650
effective HSP length: 53
effective length of query: 123
effective length of database: 97,849
effective search space: 12035427
effective search space used: 12035427
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.4 bits)
S2: 40 (20.2 bits)