GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002828-TA|BGIBMGA002828-PA|undefined
         (167 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    24   2.1  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    24   2.1  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    24   2.1  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   2.8  

>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 40  HCNGTIFSNIRTSTWHTYSSPYEHTGFGPPSK 71
           H  G   +N+ ++    Y    EH G  PPS+
Sbjct: 300 HPTGCSLNNLLSTNRKVYEFGLEHEGLKPPSQ 331


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 40  HCNGTIFSNIRTSTWHTYSSPYEHTGFGPPSK 71
           H  G   +N+ ++    Y    EH G  PPS+
Sbjct: 300 HPTGCSLNNLLSTNRKVYEFGLEHEGLKPPSQ 331


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
          protein.
          Length = 344

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)

Query: 65 GFGPPSKRAGREAFTREQQPG 85
          GFGP +++ GR     +QQPG
Sbjct: 38 GFGPQTRK-GRRPVADDQQPG 57


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 92  RDGCQRTWRQGLRVRALMVAALDR 115
           RD  ++ W+  L  + L  AALDR
Sbjct: 217 RDNAKKGWKTTLYHKELFAAALDR 240


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.131    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,143
Number of Sequences: 2123
Number of extensions: 5411
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 4
length of query: 167
length of database: 516,269
effective HSP length: 60
effective length of query: 107
effective length of database: 388,889
effective search space: 41611123
effective search space used: 41611123
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)