Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002827-TA|BGIBMGA002827-PA|IPR002347|Glucose/ribitol
dehydrogenase
(276 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 41 2e-04
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 33 0.059
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 29 0.55
SPCC18.08 |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr 3|... 29 0.55
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 29 0.73
SPBC354.08c |||DUF221 family protein|Schizosaccharomyces pombe|c... 29 0.73
SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog... 29 0.73
SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr 2... 29 0.96
SPCC1322.12c |bub1||serine/threonine protein kinase Bub1|Schizos... 28 1.3
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 28 1.7
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 27 2.2
SPBC17D11.03c |||conserved fungal protein|Schizosaccharomyces po... 27 3.9
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k... 26 5.1
SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4 |Schizosac... 26 6.8
SPBP23A10.10 |ppk32||serine/threonine protein kinase Ppk32 |Schi... 26 6.8
SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces po... 26 6.8
SPAC1296.06 |||NADPH cytochrome reductase|Schizosaccharomyces po... 25 9.0
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 25 9.0
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 25 9.0
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 40.7 bits (91), Expect = 2e-04
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 12/129 (9%)
Query: 22 LTETHKGKIYFTTEDDTA-GFNILKSLERPD-IEISY-----LQMDITYTKSIIRLRHYI 74
+T + KG Y + A G+N++ PD I I + L++D+T KS+
Sbjct: 10 ITGSSKGLGYALVKVGLAQGYNVIACSRAPDTITIEHSKLLKLKLDVTDVKSVETAFKDA 69
Query: 75 QDLDERIDLLINITDY--VAEKNLSNFEKIRRTLSVNFYGYINFGKLVYPLLNEN---AR 129
+ +D++IN Y V E N E++ R ++VNF+G K L+ E+ R
Sbjct: 70 KRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNFWGVAYITKEALNLMRESGKGGR 129
Query: 130 VVNVSGPAG 138
++ +S AG
Sbjct: 130 ILQISSVAG 138
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 32.7 bits (71), Expect = 0.059
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 184 GMNVHAVSKVALNAVTFLQHREWADKGIIINCVNPG 219
G +V+A SK L + T + E A KGI +N ++PG
Sbjct: 147 GTSVYAASKAGLESFTKVLAAEVASKGIRVNAISPG 182
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 29.5 bits (63), Expect = 0.55
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 43 ILKSLERPDIEISYLQMDITYTKSIIRLRHYIQDLDERIDLLINITDYVAEKNLSN 98
+LK ++ + IS +DI + SI I ER DL I++T Y++E L++
Sbjct: 789 MLKICKKLECPISQNVIDIIHRASITSDEQTILTFTEREDLFISLTPYLSEDVLNH 844
>SPCC18.08 |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 531
Score = 29.5 bits (63), Expect = 0.55
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 157 LTEDELVALIQEYEHAARRGVEKTEGWGMNV 187
L +DE A ++ HA G+ T GWGM V
Sbjct: 476 LGDDETPAPDSDFVHALEYGLPPTAGWGMGV 506
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 29.1 bits (62), Expect = 0.73
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 90 YVAEKNLSNFEKIRRTLSVNFYGYINFGKLVYPLLNENARVVNVSGPAGLLATIEN 145
Y+ +KNL I T+ + ++ L+Y L ++ + +SG G++ T+E+
Sbjct: 519 YIVKKNLELITSIHETIRIKSAVWVENNVLLYATL-DHLKYALMSGDTGVIKTLES 573
>SPBC354.08c |||DUF221 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 865
Score = 29.1 bits (62), Expect = 0.73
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 23 TETHKGKIYFTTEDDTAGFNILKSLERPDIEISYLQMDITYTKSIIRLRHYIQDLDERID 82
TETH K F T+ D A L+ E P + ++ +D T + + +Q L + +
Sbjct: 746 TETHN-KFDFATDSDDASEKHLRGEEEPLENVDFVDIDNVDTAKEVHDQQQVQQLKKNLS 804
Query: 83 LLINITDYVAEKNLSNFEKIRRTLSV 108
+ V+ + N E++ T S+
Sbjct: 805 RSYTRSRGVSLRARLNEEELPLTESI 830
>SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 982
Score = 29.1 bits (62), Expect = 0.73
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 86 NITDYVAEKNLSNFEKIRRTLSVNFYGYINFGKLVYPLL 124
NI D V+ ++ NFE+IRRTL N + + +P L
Sbjct: 656 NILDIVSLEDTPNFEEIRRTLENNHCARLYLKQARHPCL 694
>SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 28.7 bits (61), Expect = 0.96
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 94 KNLSNFEKIRRTLSVNFYGYINFGK--LVYPLLNENARVVNVSGPAGLLA 141
K+ S +K++ +L+V GY N GK ++ L+N +A + PAG +A
Sbjct: 258 KSYSAKKKLKSSLTVGVIGYPNVGKSSVINALVNRSANGRSAPCPAGNVA 307
>SPCC1322.12c |bub1||serine/threonine protein kinase
Bub1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1044
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/35 (42%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 71 RHYIQDLDERI-DLLINITDYVAEKNLSNFEKIRR 104
R++ QDL R+ DLL+N T +V+E+NL E++ +
Sbjct: 979 RYWNQDLWHRLFDLLLNPTLHVSEENLPMTEELSK 1013
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 27.9 bits (59), Expect = 1.7
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 13/108 (12%)
Query: 74 IQDLDERIDLLINITDYVAEKNLSNFEKIRRTLSVNFYGYINFGKLVYPLLNENARVVNV 133
I +DE LI+ TD+V + L EK + GY++ +L+ LLN+ +++N
Sbjct: 1128 IPSVDESFISLIHSTDHVEQPLLIEIEK-NKGYKFKLTGYLS-SELLNNLLNDFDKILNF 1185
Query: 134 SGPAGLLATIENEDIRKRISDPTLTEDELVALIQEYEHAARRGVEKTE 181
+L IE++ + T+TE V E AR G K E
Sbjct: 1186 -----ILYNIESKIQTHASFNVTITEHNHV------ESKARTGFSKRE 1222
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 98 NFEKIRRTLSVNFYGYINFGK-LVYPLLNENARVVNVS 134
+ E + + + VNFYG I K + L+ +VNV+
Sbjct: 97 DIEDVSKVMDVNFYGVIRMNKAFQHQLIRAKGTIVNVN 134
>SPBC17D11.03c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 213
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/58 (18%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 27 KGKIYFTTEDDTAGFNILKSLERPDIEISYLQMDITYTKSIIRLRHYIQDLDERIDLL 84
+GKIYF +L+S++ ++++ + +D Y K ++ + L+ + ++
Sbjct: 103 RGKIYFEKTYGKVTQRVLRSMQSSSLDLANIALDYAYGK-VLSFNEVVSPLETSLMII 159
>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 836
Score = 26.2 bits (55), Expect = 5.1
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 11/91 (12%)
Query: 86 NITDYVAEKNLSNFEKIRRTLSVNFYGYINFGKLVYPLLNENARVV-------NVSGPAG 138
++ + KNLS + ++ + + I GKL P++++N R+V N S
Sbjct: 110 DLKEIFLNKNLSTLDGLQ---DASLHDNIQSGKLDNPVISQNRRIVLEKLANPNSSKEYE 166
Query: 139 LLATIEN-EDIRKRISDPTLTEDELVALIQE 168
+ T+EN + K TL +E + + E
Sbjct: 167 TIPTVENRHPLNKLSKTKTLAYEETINQLDE 197
>SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 446
Score = 25.8 bits (54), Expect = 6.8
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 54 ISYLQMDITYTKSIIRLRHYIQDLDERIDLLINITDYVAEKNLSNFEKIRRTLS 107
+ + + I Y K+ I YI D+ ER++LLI+ T V ++S K+R LS
Sbjct: 166 VPWRRAGIKYRKNSI----YI-DIVERMNLLISSTGNVLRSDVSGVVKMRAMLS 214
>SPBP23A10.10 |ppk32||serine/threonine protein kinase Ppk32
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 749
Score = 25.8 bits (54), Expect = 6.8
Identities = 25/119 (21%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Query: 17 QVLKKLTETHKGKIYFTTEDDTAGFNILKSLERPDIEISYLQMDITYTKSIIRLRHYIQD 76
++ K L + G ++ +NI S D + + ++++S+ R+ D
Sbjct: 149 EIQKGLLQIIDGLVFLHGSAKVIHYNIRPSSVVVDAKGDWKLCGFSFSQSVESARYEFND 208
Query: 77 LDERI-DLLINITDYVAEKNLSNFEKIRRTLSVNFYGYINFGKLVYPLLNENARVVNVS 134
D I L D++A + +++ +I S F +FG L+Y + N+N ++N +
Sbjct: 209 YDFGIPSSLQQSMDFLAPEYITH--EIAGPESDVF----SFGCLIYSIFNKNQSIINAN 261
>SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 25.8 bits (54), Expect = 6.8
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 125 NENARVVNVSGPAGLLATIENEDIRKRISDPTLTED 160
NE+ R VN S ++I+ ++R +SD T +E+
Sbjct: 309 NEDKRSVNGSERTETRSSIDQSEMRTNVSDSTKSEE 344
>SPAC1296.06 |||NADPH cytochrome reductase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 558
Score = 25.4 bits (53), Expect = 9.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 117 GKLVYPLLNENARVVNVSGPAGLLATIENEDIRKRIS 153
G+LVY LLNE + VSG +G + + + I +S
Sbjct: 494 GELVYNLLNEKDGMFFVSGSSGKMPSSVKDAIAGIVS 530
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 25.4 bits (53), Expect = 9.0
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 27 KGKIYFTTEDDTAGFNILKSLERPDIEISYLQMDITYTKSIIRLRHYIQ--DLDERIDLL 84
KGKI E+ +ILK+ + T T ++ + DLDE D
Sbjct: 382 KGKISTDMEECKVSKSILKTTPSKKANARSVSFTQTTTDTLSESEKFASNVDLDENFDFN 441
Query: 85 INITDYVAEK 94
+N+T+ A++
Sbjct: 442 VNVTNEDAKQ 451
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 25.4 bits (53), Expect = 9.0
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 25 THKGKIYFTTEDDTAGFNILKSLERPDIEISYLQMDITYTKSIIRLRHYIQDL 77
TH K + DD + L+ + PDI+ D T ++S Y+QDL
Sbjct: 461 THLEKPVISKNDDLIRGDDLEPYDFPDIDSEDTDDDPTVSRSKTHSPVYVQDL 513
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.136 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,274,548
Number of Sequences: 5004
Number of extensions: 52604
Number of successful extensions: 169
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 159
Number of HSP's gapped (non-prelim): 19
length of query: 276
length of database: 2,362,478
effective HSP length: 72
effective length of query: 204
effective length of database: 2,002,190
effective search space: 408446760
effective search space used: 408446760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)
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