Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002827-TA|BGIBMGA002827-PA|IPR002347|Glucose/ribitol
dehydrogenase
(276 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0373 - 24785799-24786200,24787979-24788161,24790909-247911... 75 6e-14
02_04_0556 - 23848751-23849158,23850615-23850797,23853644-238539... 68 7e-12
04_04_0610 + 26590974-26591008,26591111-26591540,26591698-265918... 67 1e-11
04_04_0605 + 26549904-26551939,26553931-26554180,26554764-265548... 66 3e-11
01_07_0056 - 40787723-40788124,40788236-40788430,40788914-40789309 66 4e-11
02_05_0091 + 25745971-25746050,25746196-25746439,25746542-257466... 58 1e-08
04_04_0608 - 26585436-26585843,26585897-26586091,26586315-265863... 54 9e-08
07_03_1727 + 29068348-29068571,29069473-29069514,29069593-290698... 47 1e-05
06_03_0618 + 22798419-22798588,22798672-22798771,22798891-227989... 42 5e-04
11_04_0128 + 13752727-13752809,13752922-13753129,13753238-137533... 40 0.002
12_02_1230 - 27204881-27205765 38 0.007
01_07_0064 + 40834649-40834786,40834934-40834997,40835333-408353... 36 0.047
12_02_1064 - 25771870-25772102,25772222-25772375,25772487-257725... 35 0.082
11_04_0145 + 14082864-14082946,14083060-14083267,14083383-140835... 34 0.11
10_08_0835 - 20916364-20916462,20916503-20916549,20916750-209168... 34 0.14
11_06_0591 - 25300751-25300918,25301325-25301874,25301954-25302042 33 0.19
11_06_0581 - 25189303-25189470,25190178-25190715,25190789-25190877 33 0.19
09_02_0572 - 10796997-10797152,10797259-10797412,10798023-107980... 33 0.19
02_05_0093 + 25753021-25753061,25753159-25753402,25753843-257539... 32 0.44
03_02_0499 - 8908323-8908423,8908822-8908972,8909761-8909867,890... 31 0.77
11_04_0131 + 13792531-13792632,13795943-13796110 29 3.1
07_01_0501 - 3745447-3746244 29 4.1
02_03_0341 - 17948124-17948183,17948417-17948499,17948668-179487... 29 4.1
01_06_1312 - 36205549-36206649,36207558-36207883,36209083-362091... 29 4.1
11_04_0130 + 13790349-13790431,13790590-13790704,13790832-13791053 29 5.4
03_05_0168 - 21466431-21466445,21467053-21467160,21467222-214673... 29 5.4
03_03_0246 + 15789635-15794227,15794314-15794555,15794630-157947... 29 5.4
02_04_0222 - 21034183-21035920,21036484-21036687,21037323-21037345 29 5.4
07_03_1187 + 24667044-24667091,24667196-24667274,24667520-246676... 28 7.1
07_01_0500 + 3744062-3744847 28 7.1
04_03_0214 + 12713865-12713973,12715780-12716011,12716556-127166... 28 7.1
03_05_0833 - 28045442-28045881,28045961-28046063,28046172-280462... 28 7.1
07_03_0053 + 12842096-12842539 28 9.4
05_03_0186 + 9365179-9365342,9367332-9367403,9368362-9368433,936... 28 9.4
03_06_0550 - 34669997-34670355,34670590-34670656 28 9.4
>04_04_0373 -
24785799-24786200,24787979-24788161,24790909-24791170,
24791565-24791656
Length = 312
Score = 74.9 bits (176), Expect = 6e-14
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 17/258 (6%)
Query: 4 VALVVGAASNLGYQVLKKLTETHKGKIYFTTEDDTAGFNILKSLERPDIEISYLQMDITY 63
VA+V GA +G + +L E H + T D G +L + + + ++D+
Sbjct: 39 VAVVTGANRGIGLALAARLGE-HGITVVLTARDAERGEAAAAALRARGLHVVFHRLDVAD 97
Query: 64 TKSIIRLRHYIQDLDERIDLLINITDY-VAEKNLSNFEKIRRTLSVNFYGYINFGKLVYP 122
S+ +++D +D+L+N E + ++ E L NFYG + + P
Sbjct: 98 PASVQAFAAWLRDAIGGLDILVNNAAVSFNEIDTNSVEHAETVLRTNFYGAKMLTEALLP 157
Query: 123 LLNEN---ARVVNVSGPAGLLATIENEDIRKRISD-PTLTEDELVALIQEYEHAARRGVE 178
L + +R++N+S GLL + + ++++ + D LTE E+ + + + G
Sbjct: 158 LFRRSPATSRILNISSQLGLLNKVSDPELKRLLQDEERLTEAEVEGMASRFLAQVKDGTW 217
Query: 179 KTEGWG--MNVHAVSKVALNAVTFLQHREWADKG--IIINCVNPG----SLSGRDGRRTT 230
+ +GW ++VSK+ALNA + R +G + +NC PG ++ G+RT
Sbjct: 218 RGQGWPKVWTDYSVSKLALNAYARVLARRLQARGDRVSVNCFCPGFTRTDMTRGWGKRTA 277
Query: 231 KIYEEGAKAILYLALEAP 248
EE A+ LAL P
Sbjct: 278 ---EEAAEIGARLALLPP 292
>02_04_0556 -
23848751-23849158,23850615-23850797,23853644-23853908,
23854019-23854059
Length = 298
Score = 68.1 bits (159), Expect = 7e-12
Identities = 65/259 (25%), Positives = 114/259 (44%), Gaps = 16/259 (6%)
Query: 4 VALVVGAASNLGYQVLKKLTETHKGKIYFTTEDDTAGFNILKSLERPDIE-ISYLQMDIT 62
VA+V GA +G+ + +L E + T D G +L + + + ++D++
Sbjct: 22 VAVVTGANRGIGHALAARLAEQGLA-VVLTARDGARGEAAAAALRARGLRSVRFRRLDVS 80
Query: 63 YTKSIIRLRHYIQDLDERIDLLINITDY-VAEKNLSNFEKIRRTLSVNFYGYINFGKLVY 121
S+ +++D +D+L+N E + ++ E L NFYG + +
Sbjct: 81 DPASVAAFASWLRDELGGLDILVNNAAVSFNEIDTNSVEHAETVLRTNFYGAKMLIEALL 140
Query: 122 PLLNE---NARVVNVSGPAGLLATIENEDIRKRISD-PTLTEDELVALIQEYEHAARRGV 177
PL N+R++N+S GLL + + +R + D +LTE ++ + + + G
Sbjct: 141 PLFRRSAANSRILNISSQLGLLNKVRDPSLRSMLLDEASLTEGKIERMASRFLAEVKDGT 200
Query: 178 EKTEGWGMNV----HAVSKVALNAVTFLQHREWADKG--IIINCVNPGSLSGRDGRR--T 229
G G +AVSK+ALNA + + A G + +NC PG + D R
Sbjct: 201 WSAPGRGWPAVWTDYAVSKLALNAYSRVLAARLARGGDRVAVNCFCPG-FTRTDMTRGWG 259
Query: 230 TKIYEEGAKAILYLALEAP 248
T+ EE + LAL P
Sbjct: 260 TRTAEEAGRVAAGLALLPP 278
>04_04_0610 +
26590974-26591008,26591111-26591540,26591698-26591892,
26591992-26592372
Length = 346
Score = 67.3 bits (157), Expect = 1e-11
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 90 YVAEKNLSNFEKIRRTLSVNFYGYINFGKLVYPLL--NENARVVNVSGPAGLLATIENED 147
++ ++ ++ + + N+YG + + + PLL + ++VNVS GLL + NED
Sbjct: 167 WMRKQGRETYDTAKNGVQTNYYGAKHVIQGLLPLLLSSSEGKIVNVSSALGLLRFLGNED 226
Query: 148 IRKRISD-PTLTEDELVALIQEYEHAARRGVEKTEGW--GMNVHAVSKVALNAVTFLQHR 204
+RK + D LTE+ L ++ + G + GW G + V+KVA+NA T + R
Sbjct: 227 LRKELDDIDNLTEERLDEVLASFLKDFEAGELEAHGWPMGSAAYKVAKVAMNAYTRISAR 286
Query: 205 EWADKGIIINCVNPG----SLSGRDGRRTTKIYEEGAKAILYLAL 245
+ + INC +PG L+ G T EEGA+ ++ +AL
Sbjct: 287 K--HPALRINCAHPGYVKTDLTINSGFLTP---EEGARNVVTVAL 326
>04_04_0605 +
26549904-26551939,26553931-26554180,26554764-26554829,
26555194-26555388,26555830-26556141,26556537-26556595,
26557138-26557381,26557466-26557528,26557997-26558386
Length = 1204
Score = 66.1 bits (154), Expect = 3e-11
Identities = 43/152 (28%), Positives = 81/152 (53%), Gaps = 9/152 (5%)
Query: 74 IQDLDERIDLLINITDYVAEKNLSNFEKIRRTLSVNFYGYINFGKLVYPLL--NENARVV 131
++D E +D+ + +++ E + +++ + ++ N+YG + + PLL + + R+V
Sbjct: 781 VKDQIEGMDVDQRV-EWMRENSKETYDEAKSCITTNYYGAKLVTEALLPLLLLSSSGRIV 839
Query: 132 NVSGPAGLLATIENEDIRKRISD-PTLTEDELVALIQEYEHAARRGVEKTEGW---GMNV 187
NVS GLL +ED+RK D +LTE L L+ + + + + GW G +
Sbjct: 840 NVSSGFGLLRNFNSEDLRKEFDDIDSLTEKRLEELLDLFLDDFKVNLIEAHGWPTGGSSA 899
Query: 188 HAVSKVALNAVTFLQHREWADKGIIINCVNPG 219
+ V+K ALNA T + +++ + INC+ PG
Sbjct: 900 YKVAKAALNAYTRILAKKYPT--LRINCLTPG 929
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 4 VALVVGAASNLGYQVLKKLTETHKGKIYFTTEDDTAGFNILKSLERP---DIEISYLQMD 60
+ALV G +G + ++L ++ T ++ G + + R D ++ + Q+D
Sbjct: 680 IALVTGGNKGVGLETCRQLASRGL-RVVLTARNEARGLEAVDGIRRSGAADSDVVFHQLD 738
Query: 61 ITYTKSIIRLRHYIQDLDERIDLLIN 86
+T S+ RL +++D R+D+LIN
Sbjct: 739 VTDAASVARLADFVRDQFGRLDILIN 764
>01_07_0056 - 40787723-40788124,40788236-40788430,40788914-40789309
Length = 330
Score = 65.7 bits (153), Expect = 4e-11
Identities = 64/266 (24%), Positives = 123/266 (46%), Gaps = 28/266 (10%)
Query: 4 VALVVGAASNLGYQVLKKLTETHKGKIYFTTEDDTAGFNILKSLE----RPDIEISYLQM 59
VA+V GA +GY+ ++L TH + T+ D G + + + +P + + + Q+
Sbjct: 49 VAVVTGANRGIGYEAARQLA-THGLHVVLTSRDAARGRDATEQIRAAAGKPGVSVEWRQL 107
Query: 60 DITYTKSIIRLRHYIQDLDERIDLLINITDYVAEKNLSN-FEKIRRTLSVNFYGYINFGK 118
D+T S+ +++ + +L+N + N E + + N++G +
Sbjct: 108 DVTDAASVEGFATWVERTHGGVHVLVNNAGVNFNRGADNSVEFAEQVIETNYFGTKRMIE 167
Query: 119 LVYPLL---NENARVVNVSGPAGLL----ATIENEDIRKR-ISDPTLTEDELVALIQEY- 169
+ PL+ R+VNVS G + I + +R+R ++D L+E+ + ++ ++
Sbjct: 168 AMMPLMITSPHGGRIVNVSSRLGRVNGRRNRIGDPSLRERLLNDDHLSEELINEMVMKFL 227
Query: 170 EHAARRGVEKTEGWGM--NVHAVSKVALNAVTFLQHREWADK----GIIINCVNPG---- 219
E + W +++SK+A+NA T L R D+ I INC PG
Sbjct: 228 EQTKQDNWSSGNEWPQMYTDYSISKLAVNAYTRLLARRLLDRPEGQKIYINCFCPGWVKT 287
Query: 220 SLSGRDGRRTTKIYEEGAKAILYLAL 245
+++G +G + EEGA ++LAL
Sbjct: 288 AMTGWEGNISA---EEGADTGVWLAL 310
>02_05_0091 +
25745971-25746050,25746196-25746439,25746542-25746628,
25747060-25747245,25747527-25747904
Length = 324
Score = 57.6 bits (133), Expect = 1e-08
Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 9/175 (5%)
Query: 82 DLLINITDYVAEKNLSNFEKIRRTLSVNFYGYINFGKLVYPLL--NENARVVNVSGPAGL 139
DL+ + Y+ N+E + L +NFYG + + PLL + + +V+N++
Sbjct: 139 DLMGFLNSYMGSLQ-QNYEMAKECLEINFYGTKDVTDCLMPLLLLSNSGKVINLTSKISQ 197
Query: 140 LATIENEDIRKRISD-PTLTEDELVALIQEYEHAARRGVEKTEGWG--MNVHAVSKVALN 196
L I NE + K +SD L++++L + + + G + GW ++ +AVSK +N
Sbjct: 198 LQFISNEGVIKVLSDIDNLSDEKLKDVASIFLKDFKDGNLEAHGWQPVVSAYAVSKTLVN 257
Query: 197 AVTFLQHREWADKGIIINCVNPGSLSGRDGRRTTKI-YEEGAKAILYLALEAPLS 250
A + L + + + CVNPG + I EEGA A + LAL+ S
Sbjct: 258 AYSRLLAKR--HPSLEVCCVNPGFVKTDMNYGIGLISVEEGANAPVRLALQEACS 310
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/84 (25%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 4 VALVVGAASNLGYQVLKKLTETHKGKIYFTTEDDTAGFNILKSLERPDIE-ISYLQMDIT 62
VA+V G +G ++ ++L ++ + T D+ G +K+LE+ + + + Q+D+T
Sbjct: 28 VAVVTGGNRGVGLEICRQLA-SNGILVVLTARDEKKGSQAVKALEQSGLSGVIFHQLDVT 86
Query: 63 YTKSIIRLRHYIQDLDERIDLLIN 86
SI+ L +I+ + ++L+N
Sbjct: 87 DRSSIMLLVEFIRTKFGKFNILVN 110
>04_04_0608 -
26585436-26585843,26585897-26586091,26586315-26586389,
26586682-26586742,26587179-26587213
Length = 257
Score = 54.4 bits (125), Expect = 9e-08
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 19/163 (11%)
Query: 99 FEKIRRTLSVNFYGYINFGKLVYPLLNENA--RVVNVSGPAGLLATIE---------NED 147
++ + L N+YG N + + PLL ++ R+VNV+ GLL T + NE+
Sbjct: 78 YDAAKAGLKTNYYGTKNVTEALLPLLQSSSDGRIVNVASSFGLLRTADTKDCMQFFTNEE 137
Query: 148 IRKRISD-PTLTEDELVALIQEYEHAARRGVEKTEGW--GMNVHAVSKVALNAVTFLQHR 204
+++ ++D +L+E+ L L+ + G GW + + V+K A++A + R
Sbjct: 138 LKRELNDADSLSEERLDELLGMFVRDFEAGAVAERGWPTEFSAYKVAKAAMSAYARILAR 197
Query: 205 EWADKGIIINCVNPGSLSGRDGRRTTKIY--EEGAKAILYLAL 245
+ + +NCV+PG + D R + + EEGA ++ +AL
Sbjct: 198 K--RPALRVNCVDPGYVK-TDLTRNSGLLTPEEGASRVVAVAL 237
>07_03_1727 +
29068348-29068571,29069473-29069514,29069593-29069839,
29069936-29070013,29070551-29070736,29070829-29071126,
29071775-29072244
Length = 514
Score = 47.2 bits (107), Expect = 1e-05
Identities = 41/173 (23%), Positives = 82/173 (47%), Gaps = 9/173 (5%)
Query: 76 DLDERIDLLINITDYVAEKNLSNFEKIRRTLSVNFYGYINFGKLVYPLLNEN---ARVVN 132
++D R+ L + + + +++ + L+ N+YG + + PLL ++ AR+VN
Sbjct: 191 NIDPRVWLSGKAVNLIQSVIVQTYDEAVKCLNTNYYGLKWITEALLPLLKQSPSGARIVN 250
Query: 133 VSGPAGLLATIENEDIRKRISDPTL-TEDELVALIQEYEHAARRGVEKTEGWG--MNVHA 189
+ L I NE +R + + + E + A++ E+ + + GW + ++
Sbjct: 251 TTSLRSELKRIPNEKLRDELRNIDIWDEARIEAMLNEFLLDLKNERLEEAGWPTMLPAYS 310
Query: 190 VSKVALNAVTFLQHREWADKGIIINCVNPGSLSGRDGRRTTKI-YEEGAKAIL 241
+SK +N T + + + + INCV+PG ++ T I EEGA+ L
Sbjct: 311 MSKTVVNLYTRILAKRHPE--MRINCVHPGFVNTEINWNTGIIPPEEGAREAL 361
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 4 VALVVGAASNLGYQVLKKLTETHKGKIYFTTEDDTAGFNILKSL--ERPDIEISYLQMDI 61
+A+V G +G +V ++L + T D+ G + ++SL E I + Q+DI
Sbjct: 90 LAVVTGGNRGIGLEVCRQLA-LQGVTVILTARDEKRGKDAVESLCHESNLSNIIFHQLDI 148
Query: 62 TYTKSIIRLRHYIQDLDERIDLLIN 86
S L YI ++D+L+N
Sbjct: 149 LDGNSRASLARYINSRFGKLDILVN 173
>06_03_0618 +
22798419-22798588,22798672-22798771,22798891-22798971,
22799131-22799180,22799302-22799452,22800027-22800083,
22800171-22800292,22800397-22800601
Length = 311
Score = 41.9 bits (94), Expect = 5e-04
Identities = 60/258 (23%), Positives = 104/258 (40%), Gaps = 28/258 (10%)
Query: 6 LVVGAASNLGYQVLKKLTETHKGKIYFTTEDDTAGFNILKSLERPDIEISYLQMDITYTK 65
LV GA S +G+ + L + +Y + G L + ++ + ++I
Sbjct: 38 LVTGANSGIGFATAEGLA-SRGATVYMLCRNKERGETALSQIRSKTGNMN-VHLEICDLS 95
Query: 66 SIIRLRHY---IQDLDERIDLLINITDYVAEKNLSNFEKIRRTLSVNFYGYINFGKLVYP 122
SI ++ + D+ + +L+N + K ++ E + +VN +LV P
Sbjct: 96 SISEVKSFATKFSSTDKPLHVLVNNAGLLEHKRVTTPEGLELNFAVNVAATYTLTELVMP 155
Query: 123 LLNE---NARVVNVSGPAGLLATIENEDIRKRISDPTLTEDELVALIQEYEHAARRGVEK 179
LL + +ARV+ VS G+ N+D++ E+ Q+Y R V
Sbjct: 156 LLEKAAPDARVITVSS-GGMYTEPLNKDLQ-------FGENNFDG-TQQYARNKRVQVAL 206
Query: 180 TEGWGMNVHAVSKVALNAVTFL-QHREWADKGIIINCVNPGSLSGRDGRRTTKIYEEGAK 238
TE W K + V F H WAD + + PG G + +EGA
Sbjct: 207 TERWS------EKCSNKGVGFYSMHPGWADTPGVSKSL-PGLSEKLSGNLRSN--DEGAD 257
Query: 239 AILYLALEAPLSL-KGNF 255
+++LAL+ L G+F
Sbjct: 258 TVIWLALQPKEKLTSGSF 275
>11_04_0128 +
13752727-13752809,13752922-13753129,13753238-13753303,
13753611-13753767,13755629-13755712,13756355-13756461,
13756832-13756958,13757319-13757407,13757812-13757943
Length = 350
Score = 39.9 bits (89), Expect = 0.002
Identities = 48/221 (21%), Positives = 90/221 (40%), Gaps = 18/221 (8%)
Query: 5 ALVVGAASNLGYQVLKKLTETHKGKIYFTTEDDTAGFNILKS-LERPDIEISYLQMDITY 63
ALV G + +G ++++L G T A N + L + ++ D++
Sbjct: 18 ALVTGGSKGIGRAIVEELASL--GATVHTCARTEAPLNRCREELTAKGLAVTVSVCDVSL 75
Query: 64 TKSIIRLRHYIQDL-DERIDLLINITDYVAEKNLSNF--EKIRRTLSVNFYGYINFGKLV 120
L +++L ++ +L+N K + + + +NF + +L
Sbjct: 76 RADREALAGTVRELFGGKLSILVNCAGMSFLKPAVELTPDDCSQVMGMNFESCFHLSQLA 135
Query: 121 YPLLNENAR--VVNVSGPAGLLATIENEDIRKRISDPTLTEDELVALIQEYEHAARRGVE 178
YPLL + R ++N+S A ++A + + + + + + A R V
Sbjct: 136 YPLLKASQRGCIINISSIASVVAFCS-------LPNAVYSAAKDCSCLNS---AGRATVV 185
Query: 179 KTEGWGMNVHAVSKVALNAVTFLQHREWADKGIIINCVNPG 219
+ G V + A+N VT EWA+ GI +NCV PG
Sbjct: 186 RNRGNRGMQGRVERRAMNQVTRNLAAEWANDGIRVNCVAPG 226
>12_02_1230 - 27204881-27205765
Length = 294
Score = 38.3 bits (85), Expect = 0.007
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 52 IEISYLQMDITYTKSIIRLRHYIQDLDERIDLLINITDYVAEKNLSNF--EKIRRTLSVN 109
++ +L +D+T +S+ + R+D+L+N L+ E +RR + VN
Sbjct: 60 LDADHLPLDVTSDESVEGAVARVLAEHGRVDVLVNNAGIGCTGPLAELRGEAVRRAMDVN 119
Query: 110 FYGYINFGKLVYPLL--NENARVVNVSGPAGLLAT 142
F G + + V P + + RVVNV G AT
Sbjct: 120 FLGQLRMVRAVAPHMASRRSGRVVNVGSVVGTAAT 154
>01_07_0064 +
40834649-40834786,40834934-40834997,40835333-40835391,
40835602-40835677,40835775-40835846,40837641-40837728,
40838239-40838497,40838766-40839000,40839447-40839470,
40839910-40839997,40840110-40840300,40841082-40841322,
40841803-40842556
Length = 762
Score = 35.5 bits (78), Expect = 0.047
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 185 MNVHAVSKVALNAVTFLQHREWADKGIIINCVNPGSL 221
++V++ +K A+N +T EWA GI +NCV PG +
Sbjct: 657 LSVYSATKGAMNQLTRSLAAEWARDGIRVNCVAPGGV 693
>12_02_1064 -
25771870-25772102,25772222-25772375,25772487-25772569,
25772669-25772762,25773647-25773799,25774388-25774510
Length = 279
Score = 34.7 bits (76), Expect = 0.082
Identities = 29/131 (22%), Positives = 64/131 (48%), Gaps = 10/131 (7%)
Query: 4 VALVVGAASNLGYQVLKKLTE-THKGKIYFTTEDDTAGFNILKSLERPDIEISYLQMDIT 62
V++V GA+ +G + +++L + + +G++ T + + K + + ++ L +D+T
Sbjct: 27 VSMVQGASRGIGLEFVRQLLKRSDEGRVVATCRAPDSAVELQKLRQEHEQRLAVLPLDVT 86
Query: 63 YTKSIIRLRHYIQDLDERIDLLINITDYVAEKNL----SNFEKIRRT-----LSVNFYGY 113
+I I + ++LLIN T ++ N+ + F K++++ VN G
Sbjct: 87 DESTIEAAAASIGETHGSLNLLINATGILSIPNVIHPETTFSKVQKSSLLLAYEVNAVGP 146
Query: 114 INFGKLVYPLL 124
I K ++P L
Sbjct: 147 ILVIKHMWPFL 157
>11_04_0145 +
14082864-14082946,14083060-14083267,14083383-14083599,
14084170-14084276,14085521-14085674,14086848-14087029
Length = 316
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 78 DERIDLLINITDYVAEKNLSNF--EKIRRTLSVNFYGYINFGKLVYPLLNENAR--VVNV 133
D ++ +L+N K ++ E+ R ++ NF + +L YPLL ++ R +VN+
Sbjct: 91 DGKLSILVNNAGTAYLKPAADLTPEETSRLMTTNFESCFHLSQLFYPLLKDSGRGSIVNI 150
Query: 134 SGPAGLLA 141
S A +LA
Sbjct: 151 SSVASVLA 158
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 187 VHAVSKVALNAVTFLQHREWADKGIIINCVNPG 219
+++ +K A+N VT EWA GI +N V PG
Sbjct: 164 IYSAAKGAMNQVTRNLACEWASDGIRVNSVAPG 196
>10_08_0835 -
20916364-20916462,20916503-20916549,20916750-20916864,
20916933-20917011,20917365-20917518,20917660-20917739,
20918170-20918401,20918755-20918860
Length = 303
Score = 33.9 bits (74), Expect = 0.14
Identities = 25/134 (18%), Positives = 56/134 (41%), Gaps = 3/134 (2%)
Query: 4 VALVVGAASNLGYQVLKKLTETHKGKIYFTTEDDTAGFNILKSL--ERPDIEISYLQMDI 61
VA++ GA+S +G + + + ++ + AG +++ E P I L+MD+
Sbjct: 31 VAVITGASSGIGLETARVMA-LRGVRVVMAVRNVAAGHRASEAIRAEIPGAGIHVLEMDL 89
Query: 62 TYTKSIIRLRHYIQDLDERIDLLINITDYVAEKNLSNFEKIRRTLSVNFYGYINFGKLVY 121
+ S+ R + L+ +++LIN + + + + + N G+ L+
Sbjct: 90 SSMDSVRRFATEFEALNLPLNILINNAGIMTRNCTRSIDGLELQFATNHIGHFLLTNLLL 149
Query: 122 PLLNENARVVNVSG 135
+ + V G
Sbjct: 150 ENMKRTSSKTGVEG 163
>11_06_0591 - 25300751-25300918,25301325-25301874,25301954-25302042
Length = 268
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 187 VHAVSKVALNAVTFLQHREWADKGIIINCVNPGSL 221
V++++K +N +T EWA GI +NCV PG +
Sbjct: 172 VYSMTKGGMNQLTRSLAAEWAGDGIRVNCVAPGGV 206
>11_06_0581 - 25189303-25189470,25190178-25190715,25190789-25190877
Length = 264
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 187 VHAVSKVALNAVTFLQHREWADKGIIINCVNPGSL 221
V++++K +N +T EWA GI +NCV PG +
Sbjct: 168 VYSMTKGGMNQLTRSLAAEWAGDGIRVNCVAPGGV 202
>09_02_0572 -
10796997-10797152,10797259-10797412,10798023-10798065,
10798470-10798588,10798718-10798926,10799534-10799583,
10799610-10799718
Length = 279
Score = 33.5 bits (73), Expect = 0.19
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 48 ERPDIEISYLQMDITYTKSIIR----LRHYIQD--LDERIDLLINITDYVAEKNLSNFEK 101
++PD + Q+D++ KSI + L +I+D ++ I LL+N +A+ +
Sbjct: 61 QQPDAHLEAFQIDLSSYKSIKKFETSLNQWIKDSNMEHSIQLLVNNAGILAKSYRITEDG 120
Query: 102 IRRTLSVNFYGYINFGKLVYPLLNEN---ARVVNVS 134
+ + N+ G ++ PLL + +RVVN++
Sbjct: 121 LDEMIQANYIGPFVLTNILLPLLKNSSTPSRVVNLT 156
>02_05_0093 +
25753021-25753061,25753159-25753402,25753843-25753905,
25753985-25754179,25754489-25754893
Length = 315
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 4 VALVVGAASNLGYQVLKKLTETHKGKIYFTTEDDTAGFNILKSLERPDI-EISYLQMDIT 62
VA+V G LG ++ K+L + + T + G +L + + E+ + Q D++
Sbjct: 15 VAVVTGGNKGLGLEICKQLA-ANGVTVVLTARSEERGAGAAAALRQLGLSEVLFHQFDVS 73
Query: 63 YTKSIIRLRHYIQDLDERIDLLIN 86
S L +I+ ++D+L+N
Sbjct: 74 EPSSAAGLADFIKHKFGKLDILVN 97
>03_02_0499 -
8908323-8908423,8908822-8908972,8909761-8909867,
8909954-8910170,8910941-8911148,8911261-8911358
Length = 293
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 187 VHAVSKVALNAVTFLQHREWADKGIIINCVNPGSL--SGRDGRRTTKIYEEGAKA 239
++A++K A+N +T EWA I NCV PG + S +G K +E K+
Sbjct: 169 IYAMTKGAMNQLTKNLACEWAKDNIRTNCVAPGYILTSLSEGILANKEFEGSVKS 223
>11_04_0131 + 13792531-13792632,13795943-13796110
Length = 89
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 195 LNAVTFLQHREWADKGIIINCVNPG 219
+N VT EWA G+ +NCV PG
Sbjct: 1 MNQVTRNLASEWASDGVRVNCVAPG 25
>07_01_0501 - 3745447-3746244
Length = 265
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 184 GMNVHAVSKVALNAVTFLQHREWADKGIIINCVNPGSLS 222
G + + SK A+ A+ +E GI NCV PG ++
Sbjct: 168 GYSAYTASKAAVEAMVRTMAKELKGTGITANCVAPGPVA 206
>02_03_0341 -
17948124-17948183,17948417-17948499,17948668-17948761,
17948848-17948982,17949099-17949131,17949207-17949301,
17949394-17949439,17949517-17949597,17949874-17949927,
17950361-17950506,17952192-17952330
Length = 321
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 180 TEGWGMNVHAVSKVALNAVTFLQHREWADKGIIINCVNPGSLS 222
T G +A +K A+ +T RE+A + I +N V PG +S
Sbjct: 211 TGNLGQVNYAAAKAAVIGLTKTTAREFASRNITVNAVAPGFIS 253
>01_06_1312 -
36205549-36206649,36207558-36207883,36209083-36209198,
36210472-36211577
Length = 882
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Query: 216 VNPGSLSGRDGRRTTKIYEEGAKAI 240
++P S SGR GRR T +Y EG+ I
Sbjct: 81 ISPASRSGR-GRRVTTVYNEGSNRI 104
>11_04_0130 + 13790349-13790431,13790590-13790704,13790832-13791053
Length = 139
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 88 TDYVAEKNLSNFEKIRRTLSVNFYGYINFGKLVYPLLNENAR--VVNVSGPAGLLA 141
T Y+ E+ ++ NF + +L YPLL + R ++N+S A LA
Sbjct: 72 TSYLKPAVELTLEETSSLMATNFESCFHMSQLAYPLLKASGRGNIINISSAATSLA 127
>03_05_0168 -
21466431-21466445,21467053-21467160,21467222-21467365,
21467778-21467846,21467928-21468071,21468409-21468565,
21468671-21468767,21469015-21469297,21469382-21469507,
21470098-21470178,21471990-21472072,21472393-21472478,
21473329-21473422,21473516-21473681,21473777-21473851,
21474082-21474157,21474259-21474347
Length = 630
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/45 (24%), Positives = 24/45 (53%)
Query: 143 IENEDIRKRISDPTLTEDELVALIQEYEHAARRGVEKTEGWGMNV 187
++ + +++ D +DE +AL + + A G+ T GWG+ +
Sbjct: 532 VQRQRFEEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGLGI 576
>03_03_0246 + 15789635-15794227,15794314-15794555,15794630-15794771,
15796089-15796272,15796349-15796696,15796753-15797450,
15798208-15798900
Length = 2299
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 114 INFGKLVYPLLNENARVVNVSGPAGLLATIENEDIRKRISDPTLTEDELVALIQEYEHA 172
+N GKLV L EN + + +S P + T +N + +++ T T+ E ++E A
Sbjct: 1623 VNSGKLVTSLSEENNKTMPISTPFN-IGTWDNSQLNQQVMPLTQTQLEEAMKPGKFEQA 1680
>02_04_0222 - 21034183-21035920,21036484-21036687,21037323-21037345
Length = 654
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 138 GLLATIENEDIRKRISDPTLTEDELVALIQEYEHAARRGVEKTEGWGMNVHAVSKVALNA 197
G L ++ + P+ E ++VAL+ E A RG + GW V A+ +V
Sbjct: 330 GALVAAQSIRMASASGAPSEPERDMVALVDETISARHRGALEAAGW--KVRAIRRVRNPR 387
Query: 198 VTFLQHREW 206
+ EW
Sbjct: 388 AAADAYNEW 396
>07_03_1187 +
24667044-24667091,24667196-24667274,24667520-24667695,
24668216-24668766,24669080-24669941
Length = 571
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 3 NVALVVGAASNLGYQVLKKLTETHKGKIYFTTEDDTAGFNIL-KSLERPDIEISYL 57
N+AL + A S+L Y+V +K T+ + K+ T DD + FN L L P + +L
Sbjct: 251 NLALELPADSSLLYEVRRKNTQKSEPKLAHT--DDFSWFNSLDNQLANPSFCLRFL 304
>07_01_0500 + 3744062-3744847
Length = 261
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 184 GMNVHAVSKVALNAVTFLQHREWADKGIIINCVNPGSLS 222
G +A SK A+ A+ + +E + +NCV PG ++
Sbjct: 165 GYAAYAASKAAVEAMVRVMAKEVGASRVTVNCVAPGPVA 203
>04_03_0214 +
12713865-12713973,12715780-12716011,12716556-12716635,
12716930-12717083,12717213-12717291,12717654-12717738,
12718420-12718466,12720123-12720281
Length = 314
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/85 (22%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 4 VALVVGAASNLGYQVLKKLTETHKGKIYFTTEDDTAGFNILKSL--ERPDIEISYLQMDI 61
VAL+ GA+S +G + + L + + +AG + + + P ++ L +D+
Sbjct: 32 VALITGASSGIGAETCRVLV-MRGVYVVMGVRNLSAGARVRDEILKQVPSAKMEILNLDL 90
Query: 62 TYTKSIIRLRHYIQDLDERIDLLIN 86
+ S+ R + L+ +++LIN
Sbjct: 91 SSMSSVRRFAEIFKALNLPLNILIN 115
>03_05_0833 -
28045442-28045881,28045961-28046063,28046172-28046203,
28046299-28046516,28046606-28046721,28047757-28048000,
28048423-28048510,28048596-28048667,28048758-28048869,
28049047-28049115,28049627-28049685,28050067-28050325
Length = 603
Score = 28.3 bits (60), Expect = 7.1
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 64 TKSIIRLRHYIQDLDERIDLLINITDYVAEKNLSNFEKIRRTLSVNFYGYINFGKLV-YP 122
T+ I ++Y+ +L + ID N+ Y A L NFE + S Y++F L YP
Sbjct: 474 TERIEFYKNYLTELKKAIDDGANVVAYFAWSLLDNFEWLSGYTSKFGIVYVDFTTLKRYP 533
Query: 123 LLNEN--ARVVNVSGP 136
+ N ++ SGP
Sbjct: 534 KDSANWFKNMLQASGP 549
>07_03_0053 + 12842096-12842539
Length = 147
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/58 (27%), Positives = 24/58 (41%)
Query: 124 LNENARVVNVSGPAGLLATIENEDIRKRISDPTLTEDELVALIQEYEHAARRGVEKTE 181
+ E V G AT+E ++ +R+S+ E E + E AA R E E
Sbjct: 56 VGEVGEVRRQRGRPAARATVERAEMVERVSEEAAVEREAARAAERAEMAAERAAEMVE 113
>05_03_0186 +
9365179-9365342,9367332-9367403,9368362-9368433,
9368719-9368790,9368889-9368954,9369043-9369114,
9369716-9369790,9370059-9370124,9370360-9370404,
9370713-9371064,9371147-9371393,9371418-9371576,
9371659-9371807,9371878-9372088,9372242-9372473,
9372557-9372707,9373147-9373494
Length = 850
Score = 27.9 bits (59), Expect = 9.4
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Query: 69 RLRHYIQDLDERIDLLINITDYVAEKNLSNFEKIRRTLSVNFYGYINFGKLVYPLLNENA 128
+L Y+ L E DL++ +F K L++ F G + + +++ +
Sbjct: 159 KLPDYLGSLTELEDLVLRNCRISENLETVDFSKFA-ALTMLFLGNNSLIGTLPDVISSSL 217
Query: 129 RVVNVSGPAGLLATIENEDIRKRISDPTLTEDELVAL 165
+V+N+ +L + +N DI R SD T+ E + L
Sbjct: 218 KVMNLVANNIVLGSTKNSDISTRGSDNTIYEADATNL 254
>03_06_0550 - 34669997-34670355,34670590-34670656
Length = 141
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 164 ALIQEYEHAARRGVEKTEGWGMNVHAVSKVALNAVTFLQH 203
AL QEY RG + GW +NV + A A +QH
Sbjct: 101 ALCQEYRELVARGYDPKLGWDLNVQRGAAAA--AAPAVQH 138
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.136 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,526,944
Number of Sequences: 37544
Number of extensions: 291504
Number of successful extensions: 725
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 698
Number of HSP's gapped (non-prelim): 42
length of query: 276
length of database: 14,793,348
effective HSP length: 81
effective length of query: 195
effective length of database: 11,752,284
effective search space: 2291695380
effective search space used: 2291695380
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
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