GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002826-TA|BGIBMGA002826-PA|undefined
         (78 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98116-2|CAA66798.1|  447|Drosophila melanogaster tryptophan hyd...    26   7.2  
X98116-1|CAA66797.1|  452|Drosophila melanogaster tryptophan hyd...    26   7.2  
AY069306-1|AAL39451.1|  452|Drosophila melanogaster HL08079p pro...    26   7.2  
AE014296-1317|AAX52756.1|  447|Drosophila melanogaster CG7399-PB...    26   7.2  
AE014296-1316|AAF50517.1|  452|Drosophila melanogaster CG7399-PA...    26   7.2  
M32802-1|AAA69513.1|  453|Drosophila melanogaster protein ( D.me...    25   9.6  

>X98116-2|CAA66798.1|  447|Drosophila melanogaster tryptophan
           hydroxylase protein.
          Length = 447

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 12/26 (46%), Positives = 12/26 (46%)

Query: 36  PPYSASRLVFTDKAYYYKHACASPEV 61
           P Y   R  F D AY YKH    P V
Sbjct: 146 PEYRKRRKYFADIAYNYKHGEPLPHV 171


>X98116-1|CAA66797.1|  452|Drosophila melanogaster tryptophan
           hydroxylase protein.
          Length = 452

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 12/26 (46%), Positives = 12/26 (46%)

Query: 36  PPYSASRLVFTDKAYYYKHACASPEV 61
           P Y   R  F D AY YKH    P V
Sbjct: 151 PEYRKRRKYFADIAYNYKHGEPLPHV 176


>AY069306-1|AAL39451.1|  452|Drosophila melanogaster HL08079p
           protein.
          Length = 452

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 12/26 (46%), Positives = 12/26 (46%)

Query: 36  PPYSASRLVFTDKAYYYKHACASPEV 61
           P Y   R  F D AY YKH    P V
Sbjct: 151 PEYRKRRKYFADIAYNYKHGEPLPHV 176


>AE014296-1317|AAX52756.1|  447|Drosophila melanogaster CG7399-PB,
           isoform B protein.
          Length = 447

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 12/26 (46%), Positives = 12/26 (46%)

Query: 36  PPYSASRLVFTDKAYYYKHACASPEV 61
           P Y   R  F D AY YKH    P V
Sbjct: 146 PEYRKRRKYFADIAYNYKHGEPLPHV 171


>AE014296-1316|AAF50517.1|  452|Drosophila melanogaster CG7399-PA,
           isoform A protein.
          Length = 452

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 12/26 (46%), Positives = 12/26 (46%)

Query: 36  PPYSASRLVFTDKAYYYKHACASPEV 61
           P Y   R  F D AY YKH    P V
Sbjct: 151 PEYRKRRKYFADIAYNYKHGEPLPHV 176


>M32802-1|AAA69513.1|  453|Drosophila melanogaster protein (
           D.melanogaster phenylalaninehydroxylase (pah) mRNA,
           complete cds. ).
          Length = 453

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 11/26 (42%), Positives = 12/26 (46%)

Query: 36  PPYSASRLVFTDKAYYYKHACASPEV 61
           P Y+  R  F D  Y YKH    P V
Sbjct: 152 PEYAKRRKYFADIGYNYKHGQPLPHV 177


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.320    0.132    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,839,865
Number of Sequences: 52641
Number of extensions: 117525
Number of successful extensions: 164
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 158
Number of HSP's gapped (non-prelim): 6
length of query: 78
length of database: 24,830,863
effective HSP length: 58
effective length of query: 20
effective length of database: 21,777,685
effective search space: 435553700
effective search space used: 435553700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 53 (25.4 bits)