GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002826-TA|BGIBMGA002826-PA|undefined
         (78 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    20   3.1  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    19   5.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    19   5.4  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    19   5.4  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 20.2 bits (40), Expect = 3.1
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 27  DMRYSLSAIPPYSASRLVFTDKAYYYKHACASPEV 61
           DM +   A   Y A R    + A+ Y++  A P V
Sbjct: 196 DMNHPGFADKEYRARRKFIAEIAFAYRYGDAIPTV 230


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 19.4 bits (38), Expect = 5.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)

Query: 17  NFKTLSGNFNDMRYSLSAIPP 37
           NF+ L  N ND+  +   I P
Sbjct: 396 NFRILIANVNDLIKNTRCISP 416


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 5.4
 Identities = 4/20 (20%), Positives = 12/20 (60%)

Query: 37  PYSASRLVFTDKAYYYKHAC 56
           PY+    ++ + +++  H+C
Sbjct: 563 PYTVDAAIYGNISHFINHSC 582


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 19.4 bits (38), Expect = 5.4
 Identities = 6/14 (42%), Positives = 9/14 (64%)

Query: 15  QANFKTLSGNFNDM 28
           + NF+ L  N ND+
Sbjct: 564 EVNFRILGANVNDL 577


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.132    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,015
Number of Sequences: 429
Number of extensions: 857
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 78
length of database: 140,377
effective HSP length: 47
effective length of query: 31
effective length of database: 120,214
effective search space:  3726634
effective search space used:  3726634
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.5 bits)
S2: 36 (18.6 bits)