GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002825-TA|BGIBMGA002825-PA|undefined
         (469 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   2.6  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   3.5  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   4.6  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 12/50 (24%), Positives = 25/50 (50%)

Query: 372 HKPQFQGLFHGVFVGQNMVSRIKPSLWSMARDDAVVIMESRKYMIELKRD 421
           H+P  Q L    F+       +   +++ AR++A ++ E  +  IE+ +D
Sbjct: 133 HRPDTQNLDLPSFIHVFPDKYVDSQVFARAREEAHIVPEGSRTPIEIPQD 182


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 9/29 (31%), Positives = 18/29 (62%)

Query: 393 IKPSLWSMARDDAVVIMESRKYMIELKRD 421
           +   +++ AR++A V+ E  +  IE+ RD
Sbjct: 154 VDSKVFAKAREEATVVPEGSRTPIEIPRD 182


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 5/61 (8%)

Query: 109 VMAKARQLVGMIT---NPDYMSCLLPSVSLEHIKDKERDYLENLMNFWTTGNTNQYNPCE 165
           ++A A QL   IT    P+Y  CLLP   LE +   E   + +           Q++P +
Sbjct: 68  LLALAEQLGSFITLVGGPEYAYCLLP--PLESLATVEETVVRDKAVESLRAVAQQHSPAD 125

Query: 166 L 166
           L
Sbjct: 126 L 126


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.139    0.432 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,321
Number of Sequences: 317
Number of extensions: 4878
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 3
length of query: 469
length of database: 114,650
effective HSP length: 59
effective length of query: 410
effective length of database: 95,947
effective search space: 39338270
effective search space used: 39338270
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)